RNA–Protein interactions for RNA: ENST00000512332.5

CPNE4-210, Transcript of copine 4, humanhuman

TSL 1 (best) BASIC

Gene CPNE4, Length 2,230 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-210ENST00000512332 C4BPAP04003 597 aaKnown RBP9.88□□□□□ -0.83
CPNE4-210ENST00000512332 ITIH2P19823 946 aa9.88□□□□□ -0.83
CPNE4-210ENST00000512332 MAPK4P31152 587 aa9.88□□□□□ -0.83
CPNE4-210ENST00000512332 ICAM3P32942 547 aa9.88□□□□□ -0.83
CPNE4-210ENST00000512332 MMP13P45452 471 aa9.88□□□□□ -0.83
CPNE4-210ENST00000512332 PRKCEQ02156 737 aa9.88□□□□□ -0.83
CPNE4-210ENST00000512332 CENPCQ03188 943 aa9.88□□□□□ -0.83
CPNE4-210ENST00000512332 DRP2Q13474 957 aa9.88□□□□□ -0.83
CPNE4-210ENST00000512332 TRMT10CQ7L0Y3 403 aaKnown RBP9.88□□□□□ -0.83
CPNE4-210ENST00000512332 TRMT1LQ7Z2T5 733 aaKnown RBP9.88□□□□□ -0.83
CPNE4-210ENST00000512332 CCDC60Q8IWA6 550 aaPredicted RBP9.88□□□□□ -0.83
CPNE4-210ENST00000512332 OTUD6BQ8N6M0 293 aa9.88□□□□□ -0.83
CPNE4-210ENST00000512332 ZNF516Q92618 1163 aa9.88□□□□□ -0.83
CPNE4-210ENST00000512332 CYFIP2Q96F07 1278 aa9.88□□□□□ -0.83
CPNE4-210ENST00000512332 FAM213AQ9BRX8 229 aa9.88□□□□□ -0.83
CPNE4-210ENST00000512332 TEX13BQ9BXU2 312 aa9.88□□□□□ -0.83
CPNE4-210ENST00000512332 ROPN1BQ9BZX4 212 aaPredicted RBP9.88□□□□□ -0.83
CPNE4-210ENST00000512332 STMN4Q9H169 189 aaPredicted RBP9.88□□□□□ -0.83
CPNE4-210ENST00000512332 ACAD9Q9H845 621 aa9.88□□□□□ -0.83
CPNE4-210ENST00000512332 ROPN1Q9HAT0 212 aaPredicted RBP9.88□□□□□ -0.83
CPNE4-210ENST00000512332 PPANQ9NQ55 473 aaKnown RBP9.88□□□□□ -0.83
CPNE4-210ENST00000512332 HOMER3Q9NSC5 361 aa9.88□□□□□ -0.83
CPNE4-210ENST00000512332 CHORDC1Q9UHD1 332 aaPredicted RBP9.88□□□□□ -0.83
CPNE4-210ENST00000512332 HACL1Q9UJ83 578 aa9.88□□□□□ -0.83
CPNE4-210ENST00000512332 CNTN6Q9UQ52 1028 aa9.88□□□□□ -0.83
CPNE4-210ENST00000512332 SBDSQ9Y3A5 250 aaKnown RBP eCLIP9.88□□□□□ -0.83
CPNE4-210ENST00000512332 MAFBQ9Y5Q3 323 aaPredicted RBP9.88□□□□□ -0.83
CPNE4-210ENST00000512332 DOCK1Q14185 1865 aa9.88□□□□□ -0.83
CPNE4-210ENST00000512332 ARID2Q68CP9 1835 aa9.88□□□□□ -0.83
CPNE4-210ENST00000512332 TCRBV7S2A1N4TA0A589 114 aa9.87□□□□□ -0.83
CPNE4-210ENST00000512332 DCDC2CA8MYV0 355 aa9.87□□□□□ -0.83
CPNE4-210ENST00000512332 CAND2O75155 1236 aa9.87□□□□□ -0.83
CPNE4-210ENST00000512332 FSBPO95073 299 aa9.87□□□□□ -0.83
CPNE4-210ENST00000512332 SUPT20HL2P0C7V6 817 aa9.87□□□□□ -0.83
CPNE4-210ENST00000512332 KRT5P13647 590 aa9.87□□□□□ -0.83
CPNE4-210ENST00000512332 LIG4P49917 911 aa9.87□□□□□ -0.83
CPNE4-210ENST00000512332 SOX10P56693 466 aa9.87□□□□□ -0.83
CPNE4-210ENST00000512332 STRN3Q13033 797 aa9.87□□□□□ -0.83
CPNE4-210ENST00000512332 SLC29A2Q14542 456 aa9.87□□□□□ -0.83
CPNE4-210ENST00000512332 SUPT20HL1Q3ZLR7 823 aa9.87□□□□□ -0.83
CPNE4-210ENST00000512332 TBC1D10BQ4KMP7 808 aaPredicted RBP9.87□□□□□ -0.83
CPNE4-210ENST00000512332 DALRD3Q5D0E6 543 aaKnown RBP9.87□□□□□ -0.83
CPNE4-210ENST00000512332 ERMARDQ5T6L9 678 aa9.87□□□□□ -0.83
CPNE4-210ENST00000512332 NBPF12Q5TAG4 269 aaPredicted RBP9.87□□□□□ -0.83
CPNE4-210ENST00000512332 MFSD5Q6N075 450 aa9.87□□□□□ -0.83
CPNE4-210ENST00000512332 CATSPERGQ6ZRH7 1159 aa9.87□□□□□ -0.83
CPNE4-210ENST00000512332 RAPGEF5Q92565 580 aa9.87□□□□□ -0.83
CPNE4-210ENST00000512332 BICD1Q96G01 975 aa9.87□□□□□ -0.83
CPNE4-210ENST00000512332 BTBD6Q96KE9 485 aa9.87□□□□□ -0.83
CPNE4-210ENST00000512332 FNBP1Q96RU3 617 aa9.87□□□□□ -0.83
CPNE4-210ENST00000512332 POLR3FQ9H1D9 316 aaPredicted RBP9.87□□□□□ -0.83
CPNE4-210ENST00000512332 SEMA4AQ9H3S1 761 aa9.87□□□□□ -0.83
CPNE4-210ENST00000512332 PICK1Q9NRD5 415 aa9.87□□□□□ -0.83
CPNE4-210ENST00000512332 SEPT9Q9UHD8 586 aaPredicted RBP9.87□□□□□ -0.83
CPNE4-210ENST00000512332 ANAPC7Q9UJX3 599 aa9.87□□□□□ -0.83
CPNE4-210ENST00000512332 SCAF8Q9UPN6 1271 aaKnown RBP9.87□□□□□ -0.83
CPNE4-210ENST00000512332 KIAA1217Q5T5P2 1943 aa9.87□□□□□ -0.83
CPNE4-210ENST00000512332 RIPK2O43353 540 aa9.87□□□□□ -0.83
CPNE4-210ENST00000512332 SHBGP04278 402 aa9.87□□□□□ -0.83
CPNE4-210ENST00000512332 ACO1P21399 889 aaKnown RBP9.87□□□□□ -0.83
CPNE4-210ENST00000512332 TMOD1P28289 359 aa9.87□□□□□ -0.83
CPNE4-210ENST00000512332 NAMPTP43490 491 aa9.87□□□□□ -0.83
CPNE4-210ENST00000512332 CALCOCO2Q13137 446 aa9.87□□□□□ -0.83
CPNE4-210ENST00000512332 TMEM132BQ14DG7 1078 aa9.87□□□□□ -0.83
CPNE4-210ENST00000512332 PACS2Q86VP3 889 aa9.87□□□□□ -0.83
CPNE4-210ENST00000512332 DNERQ8NFT8 737 aa9.87□□□□□ -0.83
CPNE4-210ENST00000512332 NIFKQ9BYG3 293 aaKnown RBP9.87□□□□□ -0.83
CPNE4-210ENST00000512332 PORCNQ9H237 461 aa9.87□□□□□ -0.83
CPNE4-210ENST00000512332 DHX33Q9H6R0 707 aaKnown RBP9.87□□□□□ -0.83
CPNE4-210ENST00000512332 EFCC1Q9HA90 598 aa9.87□□□□□ -0.83
CPNE4-210ENST00000512332 A1CFQ9NQ94 594 aaKnown RBP9.87□□□□□ -0.83
CPNE4-210ENST00000512332 HOXC10Q9NYD6 342 aa9.87□□□□□ -0.83
CPNE4-210ENST00000512332 AGO2Q9UKV8 859 aaKnown RBP9.87□□□□□ -0.83
CPNE4-210ENST00000512332 ZNFX1Q9P2E3 1918 aaKnown RBP9.86□□□□□ -0.83
CPNE4-210ENST00000512332 RGS16O15492 202 aaPredicted RBP9.86□□□□□ -0.83
CPNE4-210ENST00000512332 HLA-DRAP01903 254 aa9.86□□□□□ -0.83
CPNE4-210ENST00000512332 ARL2P36404 184 aa9.86□□□□□ -0.83
CPNE4-210ENST00000512332 NSFP46459 744 aaKnown RBP9.86□□□□□ -0.83
CPNE4-210ENST00000512332 CAV1Q03135 178 aa9.86□□□□□ -0.83
CPNE4-210ENST00000512332 EMC2Q15006 297 aa9.86□□□□□ -0.83
CPNE4-210ENST00000512332 PLCB4Q15147 1175 aa9.86□□□□□ -0.83
CPNE4-210ENST00000512332 SGO2Q562F6 1265 aa9.86□□□□□ -0.83
CPNE4-210ENST00000512332 MON1BQ7L1V2 547 aa9.86□□□□□ -0.83
CPNE4-210ENST00000512332 MICALL2Q8IY33 904 aa9.86□□□□□ -0.83
CPNE4-210ENST00000512332 MICALL1Q8N3F8 863 aa9.86□□□□□ -0.83
CPNE4-210ENST00000512332 GRK7Q8WTQ7 553 aa9.86□□□□□ -0.83
CPNE4-210ENST00000512332 P3H4Q92791 437 aa9.86□□□□□ -0.83
CPNE4-210ENST00000512332 PI4K2AQ9BTU6 479 aa9.86□□□□□ -0.83
CPNE4-210ENST00000512332 CCDC134Q9H6E4 229 aa9.86□□□□□ -0.83
CPNE4-210ENST00000512332 TMEM134Q9H6X4 195 aa9.86□□□□□ -0.83
CPNE4-210ENST00000512332 MRPL47Q9HD33 250 aaKnown RBP9.86□□□□□ -0.83
CPNE4-210ENST00000512332 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.86□□□□□ -0.83
CPNE4-210ENST00000512332 DDX20Q9UHI6 824 aaKnown RBP9.86□□□□□ -0.83
CPNE4-210ENST00000512332 PHIPQ8WWQ0 1821 aa9.86□□□□□ -0.83
CPNE4-210ENST00000512332 MROH7Q68CQ1 1323 aa9.86□□□□□ -0.83
CPNE4-210ENST00000512332 IGKV6D-21A0A0A0MT36 114 aa9.86□□□□□ -0.83
CPNE4-210ENST00000512332 TP73O15350 636 aa9.86□□□□□ -0.83
CPNE4-210ENST00000512332 CLDN3O15551 220 aa9.86□□□□□ -0.83
CPNE4-210ENST00000512332 PSTPIP1O43586 416 aa9.86□□□□□ -0.83
CPNE4-210ENST00000512332 PROSCO94903 275 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms