RNA–Protein interactions for RNA: ENST00000512009.5

TRAPPC13-211, Transcript of trafficking protein particle complex 13, humanhuman

TSL 2

Gene TRAPPC13, Length 5,994 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-211ENST00000512009 ZNF683Q8IZ20 524 aa1.8□□□□□ -2.12
TRAPPC13-211ENST00000512009 CMASQ8NFW8 434 aaPredicted RBP1.8□□□□□ -2.12
TRAPPC13-211ENST00000512009 GRIN3AQ8TCU5 1115 aa1.8□□□□□ -2.12
TRAPPC13-211ENST00000512009 SUDS3Q9H7L9 328 aaPredicted RBP1.8□□□□□ -2.12
TRAPPC13-211ENST00000512009 ZNF287Q9HBT7 754 aa1.8□□□□□ -2.12
TRAPPC13-211ENST00000512009 COL20A1Q9P218 1284 aa1.8□□□□□ -2.12
TRAPPC13-211ENST00000512009 HACL1Q9UJ83 578 aa1.8□□□□□ -2.12
TRAPPC13-211ENST00000512009 PNMA2Q9UL42 364 aa1.8□□□□□ -2.12
TRAPPC13-211ENST00000512009 HIVEP2P31629 2446 aa1.8□□□□□ -2.12
TRAPPC13-211ENST00000512009 A0A0B4J293 547 aa1.8□□□□□ -2.12
TRAPPC13-211ENST00000512009 SNTNA6NMZ2 147 aa1.8□□□□□ -2.12
TRAPPC13-211ENST00000512009 EFCAB8A8MWE9 144 aa1.8□□□□□ -2.12
TRAPPC13-211ENST00000512009 OVOL3O00110 214 aa1.8□□□□□ -2.12
TRAPPC13-211ENST00000512009 CASQ2O14958 399 aaPredicted RBP1.8□□□□□ -2.12
TRAPPC13-211ENST00000512009 STX10O60499 249 aa1.8□□□□□ -2.12
TRAPPC13-211ENST00000512009 COQ9O75208 318 aa1.8□□□□□ -2.12
TRAPPC13-211ENST00000512009 KIAA0754O94854 1291 aa1.8□□□□□ -2.12
TRAPPC13-211ENST00000512009 ZBTB7AO95365 584 aa1.8□□□□□ -2.12
TRAPPC13-211ENST00000512009 PLEKHA8P1O95397 391 aa1.8□□□□□ -2.12
TRAPPC13-211ENST00000512009 SEMG1P04279 462 aa1.8□□□□□ -2.12
TRAPPC13-211ENST00000512009 PFKMP08237 780 aa1.8□□□□□ -2.12
TRAPPC13-211ENST00000512009 CHMP24386 653 aa1.8□□□□□ -2.12
TRAPPC13-211ENST00000512009 INPP5BP32019 993 aa1.8□□□□□ -2.12
TRAPPC13-211ENST00000512009 OGDHQ02218 1023 aa1.8□□□□□ -2.12
TRAPPC13-211ENST00000512009 MLLT1Q03111 559 aaPredicted RBP1.8□□□□□ -2.12
TRAPPC13-211ENST00000512009 EIF2B5Q13144 721 aaKnown RBP1.8□□□□□ -2.12
TRAPPC13-211ENST00000512009 CCDC158Q5M9N0 1113 aa1.8□□□□□ -2.12
TRAPPC13-211ENST00000512009 TRAPPC3LQ5T215 181 aa1.8□□□□□ -2.12
TRAPPC13-211ENST00000512009 ATXN7L2Q5T6C5 722 aaPredicted RBP1.8□□□□□ -2.12
TRAPPC13-211ENST00000512009 SMIM5Q71RC9 77 aa1.8□□□□□ -2.12
TRAPPC13-211ENST00000512009 CLEC14AQ86T13 490 aa1.8□□□□□ -2.12
TRAPPC13-211ENST00000512009 DAAM2Q86T65 1068 aa1.8□□□□□ -2.12
TRAPPC13-211ENST00000512009 LCORLQ8N3X6 602 aa1.8□□□□□ -2.12
TRAPPC13-211ENST00000512009 PRELID2Q8N945 189 aa1.8□□□□□ -2.12
TRAPPC13-211ENST00000512009 ACTRT1Q8TDG2 376 aa1.8□□□□□ -2.12
TRAPPC13-211ENST00000512009 SCFD1Q8WVM8 642 aa1.8□□□□□ -2.12
TRAPPC13-211ENST00000512009 APOBEC4Q8WW27 367 aaKnown RBP1.8□□□□□ -2.12
TRAPPC13-211ENST00000512009 STON2Q8WXE9 905 aa1.8□□□□□ -2.12
TRAPPC13-211ENST00000512009 RNF31Q96EP0 1072 aa1.8□□□□□ -2.12
TRAPPC13-211ENST00000512009 DUS3LQ96G46 650 aaKnown RBP1.8□□□□□ -2.12
TRAPPC13-211ENST00000512009 CDK5RAP3Q96JB5 506 aa1.8□□□□□ -2.12
TRAPPC13-211ENST00000512009 NYXQ9GZU5 481 aa1.8□□□□□ -2.12
TRAPPC13-211ENST00000512009 TUT1Q9H6E5 874 aaKnown RBP1.8□□□□□ -2.12
TRAPPC13-211ENST00000512009 ARFGAP3Q9NP61 516 aa1.8□□□□□ -2.12
TRAPPC13-211ENST00000512009 NLRC4Q9NPP4 1024 aa1.8□□□□□ -2.12
TRAPPC13-211ENST00000512009 POLE3Q9NRF9 147 aa1.8□□□□□ -2.12
TRAPPC13-211ENST00000512009 METTL5Q9NRN9 209 aaKnown RBP1.8□□□□□ -2.12
TRAPPC13-211ENST00000512009 HAUS2Q9NVX0 235 aa1.8□□□□□ -2.12
TRAPPC13-211ENST00000512009 QPCTLQ9NXS2 382 aa1.8□□□□□ -2.12
TRAPPC13-211ENST00000512009 FAM8A1Q9UBU6 413 aa1.8□□□□□ -2.12
TRAPPC13-211ENST00000512009 CLIP2Q9UDT6 1046 aa1.8□□□□□ -2.12
TRAPPC13-211ENST00000512009 CFAP45Q9UL16 551 aa1.8□□□□□ -2.12
TRAPPC13-211ENST00000512009 DNAH5Q8TE73 4624 aa1.8□□□□□ -2.12
TRAPPC13-211ENST00000512009 TARSL2A2RTX5 802 aaKnown RBP1.8□□□□□ -2.12
TRAPPC13-211ENST00000512009 PRAMEF25A6NGN4 478 aa1.8□□□□□ -2.12
TRAPPC13-211ENST00000512009 H3BQV1 296 aa1.8□□□□□ -2.12
TRAPPC13-211ENST00000512009 PITPNM1O00562 1244 aa1.8□□□□□ -2.12
TRAPPC13-211ENST00000512009 LETM1O95202 739 aaPredicted RBP1.8□□□□□ -2.12
TRAPPC13-211ENST00000512009 SGPL1O95470 568 aa1.8□□□□□ -2.12
TRAPPC13-211ENST00000512009 ASMTLO95671 621 aa1.8□□□□□ -2.12
TRAPPC13-211ENST00000512009 U2AF1L5P0DN76 240 aaPredicted RBP1.8□□□□□ -2.12
TRAPPC13-211ENST00000512009 GNAT1P11488 350 aa1.8□□□□□ -2.12
TRAPPC13-211ENST00000512009 SKILP12757 684 aa1.8□□□□□ -2.12
TRAPPC13-211ENST00000512009 EIF2S2P20042 333 aaKnown RBP1.8□□□□□ -2.12
TRAPPC13-211ENST00000512009 MAGEA10P43363 369 aaPredicted RBP1.8□□□□□ -2.12
TRAPPC13-211ENST00000512009 DRG2P55039 364 aaKnown RBP1.8□□□□□ -2.12
TRAPPC13-211ENST00000512009 RAB15P59190 212 aa1.8□□□□□ -2.12
TRAPPC13-211ENST00000512009 GPX6P59796 221 aa1.8□□□□□ -2.12
TRAPPC13-211ENST00000512009 U2AF1Q01081 240 aaKnown RBP eCLIP1.8□□□□□ -2.121e-6■■□□□ 12.9
TRAPPC13-211ENST00000512009 STIM1Q13586 685 aa1.8□□□□□ -2.12
TRAPPC13-211ENST00000512009 LONRF2Q1L5Z9 754 aa1.8□□□□□ -2.12
TRAPPC13-211ENST00000512009 ANKRD45Q5TZF3 282 aa1.8□□□□□ -2.12
TRAPPC13-211ENST00000512009 SUSD4Q5VX71 490 aa1.8□□□□□ -2.12
TRAPPC13-211ENST00000512009 RALYLQ86SE5 291 aaKnown RBP1.8□□□□□ -2.12
TRAPPC13-211ENST00000512009 MORC1Q86VD1 984 aa1.8□□□□□ -2.12
TRAPPC13-211ENST00000512009 VPS36Q86VN1 386 aa1.8□□□□□ -2.12
TRAPPC13-211ENST00000512009 PDPRQ8NCN5 879 aa1.8□□□□□ -2.12
TRAPPC13-211ENST00000512009 PHOSPHO2Q8TCD6 241 aa1.8□□□□□ -2.12
TRAPPC13-211ENST00000512009 MIPOL1Q8TD10 442 aa1.8□□□□□ -2.12
TRAPPC13-211ENST00000512009 AUTS2Q8WXX7 1259 aa1.8□□□□□ -2.12
TRAPPC13-211ENST00000512009 SKA1Q96BD8 255 aa1.8□□□□□ -2.12
TRAPPC13-211ENST00000512009 RTP4Q96DX8 246 aa1.8□□□□□ -2.12
TRAPPC13-211ENST00000512009 ZIM3Q96PE6 472 aa1.8□□□□□ -2.12
TRAPPC13-211ENST00000512009 FMNL2Q96PY5 1086 aa1.8□□□□□ -2.12
TRAPPC13-211ENST00000512009 ALS2CR12Q96Q35 445 aa1.8□□□□□ -2.12
TRAPPC13-211ENST00000512009 UTP14AQ9BVJ6 771 aaKnown RBP1.8□□□□□ -2.12
TRAPPC13-211ENST00000512009 TRIM9Q9C026 710 aa1.8□□□□□ -2.12
TRAPPC13-211ENST00000512009 EPN3Q9H201 632 aa1.8□□□□□ -2.12
TRAPPC13-211ENST00000512009 VRTNQ9H8Y1 702 aa1.8□□□□□ -2.12
TRAPPC13-211ENST00000512009 DDX19AQ9NUU7 478 aaKnown RBP1.8□□□□□ -2.12
TRAPPC13-211ENST00000512009 DACH1Q9UI36 760 aa1.8□□□□□ -2.12
TRAPPC13-211ENST00000512009 FLNBO75369 2602 aaKnown RBP1.8□□□□□ -2.12
TRAPPC13-211ENST00000512009 CCDC163A0A0D9SF12 145 aa1.8□□□□□ -2.12
TRAPPC13-211ENST00000512009 PTPDC1A2A3K4 754 aa1.8□□□□□ -2.12
TRAPPC13-211ENST00000512009 ASPDHA6ND91 283 aa1.8□□□□□ -2.12
TRAPPC13-211ENST00000512009 NRG2O14511 850 aaPredicted RBP1.8□□□□□ -2.12
TRAPPC13-211ENST00000512009 ACOT8O14734 319 aa1.8□□□□□ -2.12
TRAPPC13-211ENST00000512009 ACOX3O15254 700 aa1.8□□□□□ -2.12
TRAPPC13-211ENST00000512009 RAB11FIP3O75154 756 aa1.8□□□□□ -2.12
TRAPPC13-211ENST00000512009 SORBS2O94875 1100 aaKnown RBP1.8□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms