RNA–Protein interactions for RNA: ENST00000511732.1

COL1A1-213, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 789 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-213ENST00000511732 ZDHHC7Q9NXF8 308 aa16.78■□□□□ 0.28
COL1A1-213ENST00000511732 MAPTP10636 758 aaKnown RBP16.77■□□□□ 0.28
COL1A1-213ENST00000511732 HARSP12081 509 aaKnown RBP16.77■□□□□ 0.28
COL1A1-213ENST00000511732 TKTP29401 623 aaKnown RBP16.77■□□□□ 0.28
COL1A1-213ENST00000511732 GBP2P32456 591 aaPredicted RBP16.77■□□□□ 0.28
COL1A1-213ENST00000511732 YARSP54577 528 aaKnown RBP16.77■□□□□ 0.28
COL1A1-213ENST00000511732 ELAVL2Q12926 359 aaKnown RBP16.77■□□□□ 0.28
COL1A1-213ENST00000511732 TDGQ13569 410 aa16.77■□□□□ 0.28
COL1A1-213ENST00000511732 RSAD2Q8WXG1 361 aa16.77■□□□□ 0.28
COL1A1-213ENST00000511732 CDK5RAP3Q96JB5 506 aa16.77■□□□□ 0.28
COL1A1-213ENST00000511732 AK8Q96MA6 479 aa16.77■□□□□ 0.28
COL1A1-213ENST00000511732 UROC1Q96N76 676 aa16.77■□□□□ 0.28
COL1A1-213ENST00000511732 ACAP3Q96P50 834 aa16.77■□□□□ 0.28
COL1A1-213ENST00000511732 TCHPQ9BT92 498 aa16.77■□□□□ 0.28
COL1A1-213ENST00000511732 HAPLN2Q9GZV7 340 aa16.77■□□□□ 0.28
COL1A1-213ENST00000511732 TOPORSQ9NS56 1045 aaPredicted RBP16.77■□□□□ 0.28
COL1A1-213ENST00000511732 BLOC1S4Q9NUP1 217 aa16.77■□□□□ 0.28
COL1A1-213ENST00000511732 MTRRQ9UBK8 725 aa16.77■□□□□ 0.28
COL1A1-213ENST00000511732 NARSO43776 548 aaKnown RBP16.76■□□□□ 0.27
COL1A1-213ENST00000511732 KCNE1P15382 129 aa16.76■□□□□ 0.27
COL1A1-213ENST00000511732 OR1D2P34982 312 aa16.76■□□□□ 0.27
COL1A1-213ENST00000511732 RAB33AQ14088 237 aa16.76■□□□□ 0.27
COL1A1-213ENST00000511732 SF3A1Q15459 793 aaKnown RBP16.76■□□□□ 0.27
COL1A1-213ENST00000511732 SLC10A6Q3KNW5 377 aa16.76■□□□□ 0.27
COL1A1-213ENST00000511732 TMEM130Q8N3G9 435 aa16.76■□□□□ 0.27
COL1A1-213ENST00000511732 TMEM105Q8N8V8 129 aa16.76■□□□□ 0.27
COL1A1-213ENST00000511732 STAMQ92783 540 aa16.76■□□□□ 0.27
COL1A1-213ENST00000511732 C18orf25Q96B23 403 aaPredicted RBP16.76■□□□□ 0.27
COL1A1-213ENST00000511732 DDX27Q96GQ7 796 aaKnown RBP16.76■□□□□ 0.27
COL1A1-213ENST00000511732 REEP2Q9BRK0 252 aa16.76■□□□□ 0.27
COL1A1-213ENST00000511732 KCND2Q9NZV8 630 aa16.76■□□□□ 0.27
COL1A1-213ENST00000511732 CNTN3Q9P232 1028 aa16.76■□□□□ 0.27
COL1A1-213ENST00000511732 ANKFY1Q9P2R3 1169 aa16.76■□□□□ 0.27
COL1A1-213ENST00000511732 EPS15L1Q9UBC2 864 aa16.76■□□□□ 0.27
COL1A1-213ENST00000511732 DUSP12Q9UNI6 340 aa16.76■□□□□ 0.27
COL1A1-213ENST00000511732 TOM1L1O75674 476 aa16.75■□□□□ 0.27
COL1A1-213ENST00000511732 C8AP07357 584 aa16.75■□□□□ 0.27
COL1A1-213ENST00000511732 UBA7P41226 1012 aa16.75■□□□□ 0.27
COL1A1-213ENST00000511732 MRE11P49959 708 aa16.75■□□□□ 0.27
COL1A1-213ENST00000511732 SMTNP53814 917 aa16.75■□□□□ 0.27
COL1A1-213ENST00000511732 PTPN5P54829 565 aa16.75■□□□□ 0.27
COL1A1-213ENST00000511732 NCKAP1LP55160 1127 aa16.75■□□□□ 0.27
COL1A1-213ENST00000511732 NTHL1P78549 312 aa16.75■□□□□ 0.27
COL1A1-213ENST00000511732 STRN3Q13033 797 aa16.75■□□□□ 0.27
COL1A1-213ENST00000511732 DHX8Q14562 1220 aaKnown RBP16.75■□□□□ 0.27
COL1A1-213ENST00000511732 KARSQ15046 597 aaKnown RBP16.75■□□□□ 0.27
COL1A1-213ENST00000511732 PDXDC1Q6P996 788 aa16.75■□□□□ 0.27
COL1A1-213ENST00000511732 ZPBP2Q6X784 338 aa16.75■□□□□ 0.27
COL1A1-213ENST00000511732 GET4Q7L5D6 327 aaPredicted RBP16.75■□□□□ 0.27
COL1A1-213ENST00000511732 BRAPQ7Z569 592 aa16.75■□□□□ 0.27
COL1A1-213ENST00000511732 GRASPQ7Z6J2 395 aaPredicted RBP16.75■□□□□ 0.27
COL1A1-213ENST00000511732 ST13P5Q8NFI4 369 aaPredicted RBP16.75■□□□□ 0.27
COL1A1-213ENST00000511732 IGSF9Q9P2J2 1179 aa16.75■□□□□ 0.27
COL1A1-213ENST00000511732 CDY1Q9Y6F8 540 aa16.75■□□□□ 0.27
COL1A1-213ENST00000511732 NOTCH4Q99466 2003 aa16.74■□□□□ 0.27
COL1A1-213ENST00000511732 PODXLO00592 558 aa16.74■□□□□ 0.27
COL1A1-213ENST00000511732 SLC26A4O43511 780 aa16.74■□□□□ 0.27
COL1A1-213ENST00000511732 LAMP2P13473 410 aa16.74■□□□□ 0.27
COL1A1-213ENST00000511732 PLCG1P19174 1290 aa16.74■□□□□ 0.27
COL1A1-213ENST00000511732 MCL1Q07820 350 aa16.74■□□□□ 0.27
COL1A1-213ENST00000511732 NOLC1Q14978 699 aaKnown RBP eCLIP16.74■□□□□ 0.27
COL1A1-213ENST00000511732 PPM1LQ5SGD2 360 aa16.74■□□□□ 0.27
COL1A1-213ENST00000511732 CWF19L1Q69YN2 538 aaKnown RBP16.74■□□□□ 0.27
COL1A1-213ENST00000511732 HAUS6Q7Z4H7 955 aa16.74■□□□□ 0.27
COL1A1-213ENST00000511732 GPBP1Q86WP2 473 aa16.74■□□□□ 0.27
COL1A1-213ENST00000511732 KCNN1Q92952 543 aa16.74■□□□□ 0.27
COL1A1-213ENST00000511732 CALML4Q96GE6 196 aa16.74■□□□□ 0.27
COL1A1-213ENST00000511732 PRRX2Q99811 253 aa16.74■□□□□ 0.27
COL1A1-213ENST00000511732 SLC38A7Q9NVC3 462 aa16.74■□□□□ 0.27
COL1A1-213ENST00000511732 LARSQ9P2J5 1176 aaKnown RBP16.74■□□□□ 0.27
COL1A1-213ENST00000511732 KCNG1Q9UIX4 513 aa16.74■□□□□ 0.27
COL1A1-213ENST00000511732 ODF2LQ9ULJ1 636 aa16.74■□□□□ 0.27
COL1A1-213ENST00000511732 BACE2Q9Y5Z0 518 aa16.74■□□□□ 0.27
COL1A1-213ENST00000511732 ZDBF2Q9HCK1 2354 aa16.73■□□□□ 0.27
COL1A1-213ENST00000511732 VPS37CA5D8V6 355 aaPredicted RBP16.73■□□□□ 0.27
COL1A1-213ENST00000511732 CCL16O15467 120 aa16.73■□□□□ 0.27
COL1A1-213ENST00000511732 TRAPPC3O43617 180 aa16.73■□□□□ 0.27
COL1A1-213ENST00000511732 HNRNPA1P09651 372 aaKnown RBP eCLIP16.73■□□□□ 0.27
COL1A1-213ENST00000511732 NPR3P17342 541 aa16.73■□□□□ 0.27
COL1A1-213ENST00000511732 LONP1P36776 959 aaKnown RBP16.73■□□□□ 0.27
COL1A1-213ENST00000511732 ZNF131P52739 623 aa16.73■□□□□ 0.27
COL1A1-213ENST00000511732 SPAG1Q07617 926 aa16.73■□□□□ 0.27
COL1A1-213ENST00000511732 MCM6Q14566 821 aa16.73■□□□□ 0.27
COL1A1-213ENST00000511732 PTPAQ15257 358 aa16.73■□□□□ 0.27
COL1A1-213ENST00000511732 AXDND1Q5T1B0 1012 aaPredicted RBP16.73■□□□□ 0.27
COL1A1-213ENST00000511732 LIN9Q5TKA1 542 aa16.73■□□□□ 0.27
COL1A1-213ENST00000511732 USP49Q70CQ1 688 aa16.73■□□□□ 0.27
COL1A1-213ENST00000511732 SLC44A3Q8N4M1 653 aa16.73■□□□□ 0.27
COL1A1-213ENST00000511732 SLC7A14Q8TBB6 771 aa16.73■□□□□ 0.27
COL1A1-213ENST00000511732 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.73■□□□□ 0.27
COL1A1-213ENST00000511732 TUBGCP4Q9UGJ1 667 aa16.73■□□□□ 0.27
COL1A1-213ENST00000511732 CLIC4Q9Y696 253 aa16.73■□□□□ 0.27
COL1A1-213ENST00000511732 CLDN3O15551 220 aa16.72■□□□□ 0.27
COL1A1-213ENST00000511732 TBC1D4O60343 1298 aa16.72■□□□□ 0.27
COL1A1-213ENST00000511732 BMP15O95972 392 aa16.72■□□□□ 0.27
COL1A1-213ENST00000511732 CXCL8P10145 99 aa16.72■□□□□ 0.27
COL1A1-213ENST00000511732 FSHRP23945 695 aa16.72■□□□□ 0.27
COL1A1-213ENST00000511732 HOXA9P31269 272 aa16.72■□□□□ 0.27
COL1A1-213ENST00000511732 TNFSF9P41273 254 aa16.72■□□□□ 0.27
COL1A1-213ENST00000511732 SPECC1Q5M775 1068 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms