RNA–Protein interactions for RNA: ENST00000510558.6

SNF8-209, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 1,051 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-209ENST00000510558 PARVGQ9HBI0 331 aa25.13■■□□□ 1.61
SNF8-209ENST00000510558 SLC38A7Q9NVC3 462 aa25.13■■□□□ 1.61
SNF8-209ENST00000510558 CNTN3Q9P232 1028 aa25.13■■□□□ 1.61
SNF8-209ENST00000510558 ARIH1Q9Y4X5 557 aaPredicted RBP25.13■■□□□ 1.61
SNF8-209ENST00000510558 SRPRBQ9Y5M8 271 aaKnown RBP25.13■■□□□ 1.61
SNF8-209ENST00000510558 CLDN3O15551 220 aa25.12■■□□□ 1.61
SNF8-209ENST00000510558 KRT18P05783 430 aaKnown RBP25.12■■□□□ 1.61
SNF8-209ENST00000510558 KCNE1P15382 129 aa25.12■■□□□ 1.61
SNF8-209ENST00000510558 ZNF131P52739 623 aa25.12■■□□□ 1.61
SNF8-209ENST00000510558 CEBPZQ03701 1054 aaKnown RBP25.12■■□□□ 1.61
SNF8-209ENST00000510558 MCL1Q07820 350 aa25.12■■□□□ 1.61
SNF8-209ENST00000510558 SIGLEC14Q08ET2 396 aa25.12■■□□□ 1.61
SNF8-209ENST00000510558 CD300LGQ6UXG3 332 aa25.12■■□□□ 1.61
SNF8-209ENST00000510558 CYP26C1Q6V0L0 522 aa25.12■■□□□ 1.61
SNF8-209ENST00000510558 PLCD3Q8N3E9 789 aa25.12■■□□□ 1.61
SNF8-209ENST00000510558 MYCT1Q8N699 235 aa25.12■■□□□ 1.61
SNF8-209ENST00000510558 KREMEN2Q8NCW0 462 aa25.12■■□□□ 1.61
SNF8-209ENST00000510558 BICD1Q96G01 975 aa25.12■■□□□ 1.61
SNF8-209ENST00000510558 CLSTN3Q9BQT9 956 aa25.12■■□□□ 1.61
SNF8-209ENST00000510558 RHOBTB2Q9BYZ6 727 aa25.12■■□□□ 1.61
SNF8-209ENST00000510558 ZNF318Q5VUA4 2279 aa25.11■■□□□ 1.61
SNF8-209ENST00000510558 K7ENM7 598 aa25.11■■□□□ 1.61
SNF8-209ENST00000510558 MEFVO15553 781 aaPredicted RBP25.11■■□□□ 1.61
SNF8-209ENST00000510558 STX6O43752 255 aa25.11■■□□□ 1.61
SNF8-209ENST00000510558 FGFR3P22607 806 aa25.11■■□□□ 1.61
SNF8-209ENST00000510558 SEZ6Q53EL9 994 aa25.11■■□□□ 1.61
SNF8-209ENST00000510558 PDXDC1Q6P996 788 aa25.11■■□□□ 1.61
SNF8-209ENST00000510558 BMP8AQ7Z5Y6 402 aa25.11■■□□□ 1.61
SNF8-209ENST00000510558 C3orf58Q8NDZ4 430 aa25.11■■□□□ 1.61
SNF8-209ENST00000510558 SMG7Q92540 1137 aaKnown RBP25.11■■□□□ 1.61
SNF8-209ENST00000510558 ACSF2Q96CM8 615 aaPredicted RBP25.11■■□□□ 1.61
SNF8-209ENST00000510558 DDX27Q96GQ7 796 aaKnown RBP25.11■■□□□ 1.61
SNF8-209ENST00000510558 ZHX3Q9H4I2 956 aa25.11■■□□□ 1.61
SNF8-209ENST00000510558 SORCS3Q9UPU3 1222 aa25.11■■□□□ 1.61
SNF8-209ENST00000510558 TBCAO75347 108 aaKnown RBP25.1■■□□□ 1.61
SNF8-209ENST00000510558 PAPLNO95428 1278 aa25.1■■□□□ 1.61
SNF8-209ENST00000510558 DDIT3P35638 169 aa25.1■■□□□ 1.61
SNF8-209ENST00000510558 MATR3P43243 847 aaKnown RBP eCLIP25.1■■□□□ 1.61
SNF8-209ENST00000510558 SLC10A6Q3KNW5 377 aa25.1■■□□□ 1.61
SNF8-209ENST00000510558 OTOP3Q7RTS5 596 aa25.1■■□□□ 1.61
SNF8-209ENST00000510558 SNX21Q969T3 373 aa25.1■■□□□ 1.61
SNF8-209ENST00000510558 ZNF707Q96C28 371 aaPredicted RBP25.1■■□□□ 1.61
SNF8-209ENST00000510558 MFSD14AQ96MC6 490 aa25.1■■□□□ 1.61
SNF8-209ENST00000510558 CLIC6Q96NY7 704 aa25.1■■□□□ 1.61
SNF8-209ENST00000510558 USP28Q96RU2 1077 aa25.1■■□□□ 1.61
SNF8-209ENST00000510558 HAPLN2Q9GZV7 340 aa25.1■■□□□ 1.61
SNF8-209ENST00000510558 ZSCAN16Q9H4T2 348 aaPredicted RBP25.1■■□□□ 1.61
SNF8-209ENST00000510558 ZDHHC7Q9NXF8 308 aa25.1■■□□□ 1.61
SNF8-209ENST00000510558 CCDC39Q9UFE4 941 aa25.1■■□□□ 1.61
SNF8-209ENST00000510558 LIMD1Q9UGP4 676 aa25.1■■□□□ 1.61
SNF8-209ENST00000510558 FBXW11Q9UKB1 542 aa25.1■■□□□ 1.61
SNF8-209ENST00000510558 TBX20Q9UMR3 447 aa25.1■■□□□ 1.61
SNF8-209ENST00000510558 PODXLO00592 558 aa25.09■■□□□ 1.61
SNF8-209ENST00000510558 TRAPPC3O43617 180 aa25.09■■□□□ 1.61
SNF8-209ENST00000510558 TRAK2O60296 914 aa25.09■■□□□ 1.61
SNF8-209ENST00000510558 ASGR2P07307 311 aa25.09■■□□□ 1.61
SNF8-209ENST00000510558 SCP2P22307 547 aa25.09■■□□□ 1.61
SNF8-209ENST00000510558 BRCC3P46736 316 aa25.09■■□□□ 1.61
SNF8-209ENST00000510558 LIG4P49917 911 aa25.09■■□□□ 1.61
SNF8-209ENST00000510558 PBXIP1Q96AQ6 731 aa25.09■■□□□ 1.61
SNF8-209ENST00000510558 C18orf25Q96B23 403 aaPredicted RBP25.09■■□□□ 1.61
SNF8-209ENST00000510558 WDR6Q9NNW5 1121 aaKnown RBP25.09■■□□□ 1.61
SNF8-209ENST00000510558 STK17AQ9UEE5 414 aa25.09■■□□□ 1.61
SNF8-209ENST00000510558 CLUHO75153 1309 aa25.09■■□□□ 1.61
SNF8-209ENST00000510558 I3L4J1 428 aa25.08■■□□□ 1.61
SNF8-209ENST00000510558 HNRNPDLO14979 420 aaKnown RBP25.08■■□□□ 1.61
SNF8-209ENST00000510558 ADAM12O43184 909 aa25.08■■□□□ 1.61
SNF8-209ENST00000510558 TKTP29401 623 aaKnown RBP25.08■■□□□ 1.61
SNF8-209ENST00000510558 PLA2G5P39877 138 aa25.08■■□□□ 1.61
SNF8-209ENST00000510558 TXLNAP40222 546 aa25.08■■□□□ 1.61
SNF8-209ENST00000510558 MTMR3Q13615 1198 aa25.08■■□□□ 1.61
SNF8-209ENST00000510558 ASIC4Q96FT7 647 aa25.08■■□□□ 1.61
SNF8-209ENST00000510558 FIZ1Q96SL8 496 aa25.08■■□□□ 1.61
SNF8-209ENST00000510558 PRKD2Q9BZL6 878 aa25.08■■□□□ 1.61
SNF8-209ENST00000510558 PIDD1Q9HB75 910 aa25.08■■□□□ 1.61
SNF8-209ENST00000510558 MTRRQ9UBK8 725 aa25.08■■□□□ 1.61
SNF8-209ENST00000510558 MORC2Q9Y6X9 1032 aaPredicted RBP25.08■■□□□ 1.61
SNF8-209ENST00000510558 DOCK8Q8NF50 2099 aa25.08■■□□□ 1.6
SNF8-209ENST00000510558 ZMYND10O75800 440 aa25.07■■□□□ 1.6
SNF8-209ENST00000510558 PIGRP01833 764 aa25.07■■□□□ 1.6
SNF8-209ENST00000510558 CLTAP09496 248 aa25.07■■□□□ 1.6
SNF8-209ENST00000510558 CXCL8P10145 99 aa25.07■■□□□ 1.6
SNF8-209ENST00000510558 SLC39A14Q15043 492 aa25.07■■□□□ 1.6
SNF8-209ENST00000510558 RRAGBQ5VZM2 374 aa25.07■■□□□ 1.6
SNF8-209ENST00000510558 KRI1Q8N9T8 703 aaKnown RBP25.07■■□□□ 1.6
SNF8-209ENST00000510558 FAM122AQ96E09 287 aa25.07■■□□□ 1.6
SNF8-209ENST00000510558 DOCK6Q96HP0 2047 aa25.07■■□□□ 1.6
SNF8-209ENST00000510558 NMT1P30419 496 aaKnown RBP25.06■■□□□ 1.6
SNF8-209ENST00000510558 RPL9P32969 192 aaKnown RBP25.06■■□□□ 1.6
SNF8-209ENST00000510558 OR1D2P34982 312 aa25.06■■□□□ 1.6
SNF8-209ENST00000510558 LIN9Q5TKA1 542 aa25.06■■□□□ 1.6
SNF8-209ENST00000510558 ANKS3Q6ZW76 656 aa25.06■■□□□ 1.6
SNF8-209ENST00000510558 UBALD2Q8IYN6 164 aa25.06■■□□□ 1.6
SNF8-209ENST00000510558 STAMQ92783 540 aa25.06■■□□□ 1.6
SNF8-209ENST00000510558 PLEKHA5Q9HAU0 1116 aa25.06■■□□□ 1.6
SNF8-209ENST00000510558 KMT2EQ8IZD2 1858 aa25.05■■□□□ 1.6
SNF8-209ENST00000510558 N4BP1O75113 896 aaKnown RBP25.05■■□□□ 1.6
SNF8-209ENST00000510558 ABCD1P33897 745 aa25.05■■□□□ 1.6
SNF8-209ENST00000510558 TNFSF9P41273 254 aa25.05■■□□□ 1.6
SNF8-209ENST00000510558 GTF2BQ00403 316 aa25.05■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms