RNA–Protein interactions for RNA: ENST00000509258.5

RNF4-212, Transcript of ring finger protein 4, humanhuman

TSL 1 (best) BASIC

Gene RNF4, Length 893 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-212ENST00000509258 PROZP22891 400 aa11.98□□□□□ -0.49
RNF4-212ENST00000509258 OSTNP61366 133 aa11.98□□□□□ -0.49
RNF4-212ENST00000509258 PPP2R5AQ15172 486 aa11.98□□□□□ -0.49
RNF4-212ENST00000509258 SEZ6Q53EL9 994 aa11.98□□□□□ -0.49
RNF4-212ENST00000509258 LARP1BQ659C4 914 aaKnown RBP11.98□□□□□ -0.49
RNF4-212ENST00000509258 FAM173BQ6P4H8 233 aa11.98□□□□□ -0.49
RNF4-212ENST00000509258 RSPO2Q6UXX9 243 aaPredicted RBP11.98□□□□□ -0.49
RNF4-212ENST00000509258 USP49Q70CQ1 688 aa11.98□□□□□ -0.49
RNF4-212ENST00000509258 GET4Q7L5D6 327 aaPredicted RBP11.98□□□□□ -0.49
RNF4-212ENST00000509258 APBB1IPQ7Z5R6 666 aaPredicted RBP11.98□□□□□ -0.49
RNF4-212ENST00000509258 PALB2Q86YC2 1186 aa11.98□□□□□ -0.49
RNF4-212ENST00000509258 SYT2Q8N9I0 419 aaPredicted RBP11.98□□□□□ -0.49
RNF4-212ENST00000509258 RSAD2Q8WXG1 361 aa11.98□□□□□ -0.49
RNF4-212ENST00000509258 RIN2Q8WYP3 895 aaPredicted RBP11.98□□□□□ -0.49
RNF4-212ENST00000509258 IFT74Q96LB3 600 aa11.98□□□□□ -0.49
RNF4-212ENST00000509258 ZMAT2Q96NC0 199 aaKnown RBP11.98□□□□□ -0.49
RNF4-212ENST00000509258 MYADMQ96S97 322 aa11.98□□□□□ -0.49
RNF4-212ENST00000509258 PRKD2Q9BZL6 878 aa11.98□□□□□ -0.49
RNF4-212ENST00000509258 NT5C3AQ9H0P0 336 aa11.98□□□□□ -0.49
RNF4-212ENST00000509258 BLOC1S4Q9NUP1 217 aa11.98□□□□□ -0.49
RNF4-212ENST00000509258 TNFSF13BQ9Y275 285 aa11.98□□□□□ -0.49
RNF4-212ENST00000509258 STK24Q9Y6E0 443 aa11.98□□□□□ -0.49
RNF4-212ENST00000509258 TCHHQ07283 1943 aa11.98□□□□□ -0.49
RNF4-212ENST00000509258 KRBA1A5PL33 1030 aa11.97□□□□□ -0.49
RNF4-212ENST00000509258 K7ERI5 159 aa11.97□□□□□ -0.49
RNF4-212ENST00000509258 STK25O00506 426 aa11.97□□□□□ -0.49
RNF4-212ENST00000509258 PLA2G4BP0C869 781 aa11.97□□□□□ -0.49
RNF4-212ENST00000509258 LAMP2P13473 410 aa11.97□□□□□ -0.49
RNF4-212ENST00000509258 GUCY2CP25092 1073 aa11.97□□□□□ -0.49
RNF4-212ENST00000509258 EFNA5P52803 228 aa11.97□□□□□ -0.49
RNF4-212ENST00000509258 ELAVL2Q12926 359 aaKnown RBP11.97□□□□□ -0.49
RNF4-212ENST00000509258 DCAF4L1Q3SXM0 396 aa11.97□□□□□ -0.49
RNF4-212ENST00000509258 PDXDC1Q6P996 788 aa11.97□□□□□ -0.49
RNF4-212ENST00000509258 LILRA6Q6PI73 481 aa11.97□□□□□ -0.49
RNF4-212ENST00000509258 ALKAL1Q6UXT8 129 aa11.97□□□□□ -0.49
RNF4-212ENST00000509258 ADSSL1Q8N142 457 aa11.97□□□□□ -0.49
RNF4-212ENST00000509258 SLC44A3Q8N4M1 653 aa11.97□□□□□ -0.49
RNF4-212ENST00000509258 ST13P5Q8NFI4 369 aaPredicted RBP11.97□□□□□ -0.49
RNF4-212ENST00000509258 BACH2Q9BYV9 841 aa11.97□□□□□ -0.49
RNF4-212ENST00000509258 RAB34Q9BZG1 259 aa11.97□□□□□ -0.49
RNF4-212ENST00000509258 TMEM134Q9H6X4 195 aa11.97□□□□□ -0.49
RNF4-212ENST00000509258 TBC1D17Q9HA65 648 aa11.97□□□□□ -0.49
RNF4-212ENST00000509258 KMT5AQ9NQR1 393 aa11.97□□□□□ -0.49
RNF4-212ENST00000509258 ARHGEF3Q9NR81 526 aa11.97□□□□□ -0.49
RNF4-212ENST00000509258 CLIC4Q9Y696 253 aa11.97□□□□□ -0.49
RNF4-212ENST00000509258 ZFP37Q9Y6Q3 630 aaPredicted RBP11.97□□□□□ -0.49
RNF4-212ENST00000509258 EP300Q09472 2414 aaPredicted RBP11.96□□□□□ -0.49
RNF4-212ENST00000509258 ANHXE9PGG2 379 aa11.96□□□□□ -0.49
RNF4-212ENST00000509258 ZMYND10O75800 440 aa11.96□□□□□ -0.49
RNF4-212ENST00000509258 THP07101 528 aa11.96□□□□□ -0.49
RNF4-212ENST00000509258 MAPTP10636 758 aaKnown RBP11.96□□□□□ -0.49
RNF4-212ENST00000509258 HARSP12081 509 aaKnown RBP11.96□□□□□ -0.49
RNF4-212ENST00000509258 GRM5P41594 1212 aa11.96□□□□□ -0.49
RNF4-212ENST00000509258 BRCC3P46736 316 aa11.96□□□□□ -0.49
RNF4-212ENST00000509258 MCM2P49736 904 aa11.96□□□□□ -0.49
RNF4-212ENST00000509258 RESTQ13127 1097 aa11.96□□□□□ -0.49
RNF4-212ENST00000509258 DMP1Q13316 513 aaPredicted RBP11.96□□□□□ -0.49
RNF4-212ENST00000509258 HTR4Q13639 388 aa11.96□□□□□ -0.49
RNF4-212ENST00000509258 KARSQ15046 597 aaKnown RBP11.96□□□□□ -0.49
RNF4-212ENST00000509258 PTPAQ15257 358 aa11.96□□□□□ -0.49
RNF4-212ENST00000509258 SF3A1Q15459 793 aaKnown RBP11.96□□□□□ -0.49
RNF4-212ENST00000509258 ZNF568Q3ZCX4 644 aa11.96□□□□□ -0.49
RNF4-212ENST00000509258 XKR4Q5GH76 650 aa11.96□□□□□ -0.49
RNF4-212ENST00000509258 SPECC1Q5M775 1068 aa11.96□□□□□ -0.49
RNF4-212ENST00000509258 ZBTB41Q5SVQ8 909 aa11.96□□□□□ -0.49
RNF4-212ENST00000509258 LIN9Q5TKA1 542 aa11.96□□□□□ -0.49
RNF4-212ENST00000509258 FAM171A1Q5VUB5 890 aa11.96□□□□□ -0.49
RNF4-212ENST00000509258 ARL6IP4Q66PJ3 421 aaKnown RBP11.96□□□□□ -0.49
RNF4-212ENST00000509258 PHLDB3Q6NSJ2 640 aa11.96□□□□□ -0.49
RNF4-212ENST00000509258 TMEM161BQ8NDZ6 487 aa11.96□□□□□ -0.49
RNF4-212ENST00000509258 LNX1Q8TBB1 728 aaPredicted RBP11.96□□□□□ -0.49
RNF4-212ENST00000509258 GPR152Q8TDT2 470 aa11.96□□□□□ -0.49
RNF4-212ENST00000509258 C18orf25Q96B23 403 aaPredicted RBP11.96□□□□□ -0.49
RNF4-212ENST00000509258 CLSTN3Q9BQT9 956 aa11.96□□□□□ -0.49
RNF4-212ENST00000509258 SEMA4AQ9H3S1 761 aa11.96□□□□□ -0.49
RNF4-212ENST00000509258 UPF2Q9HAU5 1272 aaKnown RBP11.96□□□□□ -0.49
RNF4-212ENST00000509258 FOXD4L1Q9NU39 408 aa11.96□□□□□ -0.49
RNF4-212ENST00000509258 FBXW11Q9UKB1 542 aa11.96□□□□□ -0.49
RNF4-212ENST00000509258 CA14Q9ULX7 337 aa11.96□□□□□ -0.49
RNF4-212ENST00000509258 KIF3AQ9Y496 699 aa11.96□□□□□ -0.49
RNF4-212ENST00000509258 NUMBLQ9Y6R0 609 aa11.96□□□□□ -0.49
RNF4-212ENST00000509258 CACNA1AO00555 2505 aa11.95□□□□□ -0.5
RNF4-212ENST00000509258 SMIM28A0A1B0GU29 152 aa11.95□□□□□ -0.5
RNF4-212ENST00000509258 VPS37CA5D8V6 355 aaPredicted RBP11.95□□□□□ -0.5
RNF4-212ENST00000509258 HNRNPA1P09651 372 aaKnown RBP eCLIP11.95□□□□□ -0.5
RNF4-212ENST00000509258 PLS3P13797 630 aa11.95□□□□□ -0.5
RNF4-212ENST00000509258 PLCG1P19174 1290 aa11.95□□□□□ -0.5
RNF4-212ENST00000509258 FSHRP23945 695 aa11.95□□□□□ -0.5
RNF4-212ENST00000509258 HOXA9P31269 272 aa11.95□□□□□ -0.5
RNF4-212ENST00000509258 CLCNKBP51801 687 aa11.95□□□□□ -0.5
RNF4-212ENST00000509258 DHX8Q14562 1220 aaKnown RBP11.95□□□□□ -0.5
RNF4-212ENST00000509258 MCM6Q14566 821 aa11.95□□□□□ -0.5
RNF4-212ENST00000509258 ZC3H14Q6PJT7 736 aaKnown RBP11.95□□□□□ -0.5
RNF4-212ENST00000509258 PIK3R5Q8WYR1 880 aa11.95□□□□□ -0.5
RNF4-212ENST00000509258 DRC1Q96MC2 740 aa11.95□□□□□ -0.5
RNF4-212ENST00000509258 FIZ1Q96SL8 496 aa11.95□□□□□ -0.5
RNF4-212ENST00000509258 REEP2Q9BRK0 252 aa11.95□□□□□ -0.5
RNF4-212ENST00000509258 NTPCRQ9BSD7 190 aaKnown RBP11.95□□□□□ -0.5
RNF4-212ENST00000509258 TTPALQ9BTX7 342 aa11.95□□□□□ -0.5
RNF4-212ENST00000509258 MRPL4Q9BYD3 311 aaKnown RBP11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms