RNA–Protein interactions for RNA: ENST00000508282.1

DHFR-204, Transcript of dihydrofolate reductase, humanhuman

TSL 3

Gene DHFR, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-204ENST00000508282 ULK2Q8IYT8 1036 aa6.72□□□□□ -1.33
DHFR-204ENST00000508282 RAB24Q969Q5 203 aa6.72□□□□□ -1.33
DHFR-204ENST00000508282 MYEOVQ96EZ4 313 aa6.72□□□□□ -1.33
DHFR-204ENST00000508282 HOMER2Q9NSB8 354 aa6.72□□□□□ -1.33
DHFR-204ENST00000508282 FBXO34Q9NWN3 711 aa6.72□□□□□ -1.33
DHFR-204ENST00000508282 SERPINB13Q9UIV8 391 aa6.72□□□□□ -1.33
DHFR-204ENST00000508282 PCDHA13Q9Y5I0 950 aa6.72□□□□□ -1.33
DHFR-204ENST00000508282 CENPVL1A0A0U1RR11 272 aa6.71□□□□□ -1.34
DHFR-204ENST00000508282 TEX33O43247 280 aa6.71□□□□□ -1.34
DHFR-204ENST00000508282 LPXNO60711 386 aa6.71□□□□□ -1.34
DHFR-204ENST00000508282 POMCP01189 267 aa6.71□□□□□ -1.34
DHFR-204ENST00000508282 KRT4P19013 534 aa6.71□□□□□ -1.34
DHFR-204ENST00000508282 DDCP20711 480 aa6.71□□□□□ -1.34
DHFR-204ENST00000508282 HMGA2P52926 109 aa6.71□□□□□ -1.34
DHFR-204ENST00000508282 SLC16A1P53985 500 aa6.71□□□□□ -1.34
DHFR-204ENST00000508282 KIF23Q02241 960 aaPredicted RBP6.71□□□□□ -1.34
DHFR-204ENST00000508282 C3orf36Q3SXR2 165 aa6.71□□□□□ -1.34
DHFR-204ENST00000508282 TIGD2Q4W5G0 525 aa6.71□□□□□ -1.34
DHFR-204ENST00000508282 MIGA2Q7L4E1 593 aa6.71□□□□□ -1.34
DHFR-204ENST00000508282 RHOT2Q8IXI1 618 aa6.71□□□□□ -1.34
DHFR-204ENST00000508282 PROKR1Q8TCW9 393 aa6.71□□□□□ -1.34
DHFR-204ENST00000508282 HDAC10Q969S8 669 aa6.71□□□□□ -1.34
DHFR-204ENST00000508282 COA7Q96BR5 231 aa6.71□□□□□ -1.34
DHFR-204ENST00000508282 DKK2Q9UBU2 259 aa6.71□□□□□ -1.34
DHFR-204ENST00000508282 NOP58Q9Y2X3 529 aaKnown RBP6.71□□□□□ -1.34
DHFR-204ENST00000508282 CCDC154A6NI56 674 aa6.7□□□□□ -1.34
DHFR-204ENST00000508282 TMEM200CA6NKL6 621 aa6.7□□□□□ -1.34
DHFR-204ENST00000508282 MARCH11A6NNE9 402 aa6.7□□□□□ -1.34
DHFR-204ENST00000508282 PRSS23O95084 383 aa6.7□□□□□ -1.34
DHFR-204ENST00000508282 NDUFA10O95299 355 aa6.7□□□□□ -1.34
DHFR-204ENST00000508282 ABHD16AO95870 558 aa6.7□□□□□ -1.34
DHFR-204ENST00000508282 SLC6A2P23975 617 aa6.7□□□□□ -1.34
DHFR-204ENST00000508282 DPTQ07507 201 aa6.7□□□□□ -1.34
DHFR-204ENST00000508282 IL10RAQ13651 578 aa6.7□□□□□ -1.34
DHFR-204ENST00000508282 EFCAB2Q5VUJ9 269 aa6.7□□□□□ -1.34
DHFR-204ENST00000508282 KCNV1Q6PIU1 500 aa6.7□□□□□ -1.34
DHFR-204ENST00000508282 UBE3BQ7Z3V4 1068 aa6.7□□□□□ -1.34
DHFR-204ENST00000508282 DCBLD1Q8N8Z6 715 aa6.7□□□□□ -1.34
DHFR-204ENST00000508282 OR56A1Q8NGH5 318 aa6.7□□□□□ -1.34
DHFR-204ENST00000508282 TDP1Q9NUW8 608 aa6.7□□□□□ -1.34
DHFR-204ENST00000508282 KLHL11Q9NVR0 708 aa6.7□□□□□ -1.34
DHFR-204ENST00000508282 PPFIA4O75335 1185 aa6.69□□□□□ -1.34
DHFR-204ENST00000508282 ZRANB2O95218 330 aaKnown RBP eCLIP6.69□□□□□ -1.34
DHFR-204ENST00000508282 SPATA31D3P0C874 917 aa6.69□□□□□ -1.34
DHFR-204ENST00000508282 CDC42EP1Q00587 391 aa6.69□□□□□ -1.34
DHFR-204ENST00000508282 LY6G5CQ5SRR4 150 aa6.69□□□□□ -1.34
DHFR-204ENST00000508282 TSHZ3Q63HK5 1081 aa6.69□□□□□ -1.34
DHFR-204ENST00000508282 SPATA31D4Q6ZUB0 917 aa6.69□□□□□ -1.34
DHFR-204ENST00000508282 VRK3Q8IV63 474 aa6.69□□□□□ -1.34
DHFR-204ENST00000508282 IFI44Q8TCB0 444 aa6.69□□□□□ -1.34
DHFR-204ENST00000508282 ATP11BQ9Y2G3 1177 aa6.69□□□□□ -1.34
DHFR-204ENST00000508282 MAP3K2Q9Y2U5 619 aa6.69□□□□□ -1.34
DHFR-204ENST00000508282 SPEF1Q9Y4P9 236 aa6.69□□□□□ -1.34
DHFR-204ENST00000508282 FPGT-TNNI3KV9GXZ4 949 aa6.69□□□□□ -1.34
DHFR-204ENST00000508282 TCRBV7S2A1N4TA0A589 114 aa6.68□□□□□ -1.34
DHFR-204ENST00000508282 ELANEP08246 267 aa6.68□□□□□ -1.34
DHFR-204ENST00000508282 IBSPP21815 317 aaPredicted RBP6.68□□□□□ -1.34
DHFR-204ENST00000508282 GCSHP23434 173 aa6.68□□□□□ -1.34
DHFR-204ENST00000508282 ADKP55263 362 aaKnown RBP6.68□□□□□ -1.34
DHFR-204ENST00000508282 CTXN1P60606 82 aa6.68□□□□□ -1.34
DHFR-204ENST00000508282 DACT2Q5SW24 774 aa6.68□□□□□ -1.34
DHFR-204ENST00000508282 CPEB3Q8NE35 698 aaKnown RBP6.68□□□□□ -1.34
DHFR-204ENST00000508282 KAT5Q92993 513 aa6.68□□□□□ -1.34
DHFR-204ENST00000508282 CHFRQ96EP1 664 aa6.68□□□□□ -1.34
DHFR-204ENST00000508282 TMX3Q96JJ7 454 aa6.68□□□□□ -1.34
DHFR-204ENST00000508282 PRRX2Q99811 253 aa6.68□□□□□ -1.34
DHFR-204ENST00000508282 ADAM2Q99965 735 aa6.68□□□□□ -1.34
DHFR-204ENST00000508282 IKZF4Q9H2S9 585 aa6.68□□□□□ -1.34
DHFR-204ENST00000508282 ANKFY1Q9P2R3 1169 aa6.68□□□□□ -1.34
DHFR-204ENST00000508282 PCDHB1Q9Y5F3 818 aa6.68□□□□□ -1.34
DHFR-204ENST00000508282 CCDC78A2IDD5 438 aa6.67□□□□□ -1.34
DHFR-204ENST00000508282 SGTAO43765 313 aa6.67□□□□□ -1.34
DHFR-204ENST00000508282 CFIP05156 583 aa6.67□□□□□ -1.34
DHFR-204ENST00000508282 CCND1P24385 295 aa6.67□□□□□ -1.34
DHFR-204ENST00000508282 BMPR1AP36894 532 aa6.67□□□□□ -1.34
DHFR-204ENST00000508282 INHBCP55103 352 aa6.67□□□□□ -1.34
DHFR-204ENST00000508282 TGFB2P61812 414 aa6.67□□□□□ -1.34
DHFR-204ENST00000508282 PTPAQ15257 358 aa6.67□□□□□ -1.34
DHFR-204ENST00000508282 PCSK4Q6UW60 755 aa6.67□□□□□ -1.34
DHFR-204ENST00000508282 RSPH3Q86UC2 560 aa6.67□□□□□ -1.34
DHFR-204ENST00000508282 MAPKAPK5Q8IW41 473 aa6.67□□□□□ -1.34
DHFR-204ENST00000508282 MRGPRX4Q96LA9 322 aa6.67□□□□□ -1.34
DHFR-204ENST00000508282 ZSWIM1Q9BR11 485 aa6.67□□□□□ -1.34
DHFR-204ENST00000508282 C11orf54Q9H0W9 315 aaPredicted RBP6.67□□□□□ -1.34
DHFR-204ENST00000508282 GSTO2Q9H4Y5 243 aa6.67□□□□□ -1.34
DHFR-204ENST00000508282 NIPSNAP3AQ9UFN0 247 aaPredicted RBP6.67□□□□□ -1.34
DHFR-204ENST00000508282 A0A1B0GTW7 788 aa6.66□□□□□ -1.34
DHFR-204ENST00000508282 LOC105371045A0A1W2PR82 267 aa6.66□□□□□ -1.34
DHFR-204ENST00000508282 KIAA0391O15091 583 aaKnown RBP6.66□□□□□ -1.34
DHFR-204ENST00000508282 ALAS1P13196 640 aa6.66□□□□□ -1.34
DHFR-204ENST00000508282 DDX6P26196 483 aaKnown RBP eCLIP6.66□□□□□ -1.34
DHFR-204ENST00000508282 SLC6A4P31645 630 aa6.66□□□□□ -1.34
DHFR-204ENST00000508282 RECQLP46063 649 aaPredicted RBP6.66□□□□□ -1.34
DHFR-204ENST00000508282 CREMQ03060 361 aa6.66□□□□□ -1.34
DHFR-204ENST00000508282 OCA2Q04671 838 aa6.66□□□□□ -1.34
DHFR-204ENST00000508282 RESTQ13127 1097 aa6.66□□□□□ -1.34
DHFR-204ENST00000508282 UAP1L1Q3KQV9 507 aa6.66□□□□□ -1.34
DHFR-204ENST00000508282 B3GNTL1Q67FW5 361 aaPredicted RBP6.66□□□□□ -1.34
DHFR-204ENST00000508282 MRGPRGQ86SM5 289 aa6.66□□□□□ -1.34
DHFR-204ENST00000508282 ARHGEF19Q8IW93 802 aa6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms