RNA–Protein interactions for RNA: ENST00000506880.5

PDGFC-205, Transcript of platelet derived growth factor C, humanhuman

TSL 2

Gene PDGFC, Length 1,014 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-205ENST00000506880 DDX53Q86TM3 631 aaKnown RBP9.18□□□□□ -0.94
PDGFC-205ENST00000506880 COLGALT2Q8IYK4 626 aa9.18□□□□□ -0.94
PDGFC-205ENST00000506880 GRAMD1CQ8IYS0 662 aa9.18□□□□□ -0.94
PDGFC-205ENST00000506880 TTC39CQ8N584 583 aa9.18□□□□□ -0.94
PDGFC-205ENST00000506880 COLGALT1Q8NBJ5 622 aa9.18□□□□□ -0.94
PDGFC-205ENST00000506880 GSTCDQ8NEC7 633 aa9.18□□□□□ -0.94
PDGFC-205ENST00000506880 GPT2Q8TD30 523 aa9.18□□□□□ -0.94
PDGFC-205ENST00000506880 HELQQ8TDG4 1101 aa9.18□□□□□ -0.94
PDGFC-205ENST00000506880 TAF4BQ92750 862 aa9.18□□□□□ -0.94
PDGFC-205ENST00000506880 TMEM169Q96HH4 297 aa9.18□□□□□ -0.94
PDGFC-205ENST00000506880 ANKRD36BP1Q96IX9 119 aa9.18□□□□□ -0.94
PDGFC-205ENST00000506880 ZNF668Q96K58 619 aaPredicted RBP9.18□□□□□ -0.94
PDGFC-205ENST00000506880 FAM81BQ96LP2 452 aa9.18□□□□□ -0.94
PDGFC-205ENST00000506880 ZNF560Q96MR9 790 aa9.18□□□□□ -0.94
PDGFC-205ENST00000506880 FNBP1Q96RU3 617 aa9.18□□□□□ -0.94
PDGFC-205ENST00000506880 GAD1Q99259 594 aa9.18□□□□□ -0.94
PDGFC-205ENST00000506880 BPIFA3Q9BQP9 254 aa9.18□□□□□ -0.94
PDGFC-205ENST00000506880 CWH43Q9H720 699 aa9.18□□□□□ -0.94
PDGFC-205ENST00000506880 VRTNQ9H8Y1 702 aa9.18□□□□□ -0.94
PDGFC-205ENST00000506880 SNTG2Q9NY99 539 aa9.18□□□□□ -0.94
PDGFC-205ENST00000506880 RBAKQ9NYW8 714 aaPredicted RBP9.18□□□□□ -0.94
PDGFC-205ENST00000506880 DSEQ9UL01 958 aa9.18□□□□□ -0.94
PDGFC-205ENST00000506880 FAN1Q9Y2M0 1017 aa9.18□□□□□ -0.94
PDGFC-205ENST00000506880 R3HCC1Q9Y3T6 440 aaKnown RBP9.18□□□□□ -0.94
PDGFC-205ENST00000506880 DAAM1Q9Y4D1 1078 aa9.18□□□□□ -0.94
PDGFC-205ENST00000506880 CHD9Q3L8U1 2897 aa9.17□□□□□ -0.94
PDGFC-205ENST00000506880 ANKRD63C9JTQ0 380 aa9.17□□□□□ -0.94
PDGFC-205ENST00000506880 UPP2O95045 317 aa9.17□□□□□ -0.94
PDGFC-205ENST00000506880 EDN1P05305 212 aa9.17□□□□□ -0.94
PDGFC-205ENST00000506880 CA3P07451 260 aa9.17□□□□□ -0.94
PDGFC-205ENST00000506880 GALTP07902 379 aa9.17□□□□□ -0.94
PDGFC-205ENST00000506880 LINC00271P0C7V0 271 aa9.17□□□□□ -0.94
PDGFC-205ENST00000506880 PRR29P0C7W0 189 aa9.17□□□□□ -0.94
PDGFC-205ENST00000506880 CCDC192P0DO97 292 aa9.17□□□□□ -0.94
PDGFC-205ENST00000506880 KRT13P13646 458 aa9.17□□□□□ -0.94
PDGFC-205ENST00000506880 NR2F2P24468 414 aa9.17□□□□□ -0.94
PDGFC-205ENST00000506880 MLH1P40692 756 aa9.17□□□□□ -0.94
PDGFC-205ENST00000506880 AARSP49588 968 aaKnown RBP eCLIP9.17□□□□□ -0.94
PDGFC-205ENST00000506880 CYP24A1Q07973 514 aa9.17□□□□□ -0.94
PDGFC-205ENST00000506880 CETN1Q12798 172 aa9.17□□□□□ -0.94
PDGFC-205ENST00000506880 SMARCB1Q12824 385 aa9.17□□□□□ -0.94
PDGFC-205ENST00000506880 ADAM9Q13443 819 aa9.17□□□□□ -0.94
PDGFC-205ENST00000506880 TMEM132DQ14C87 1099 aa9.17□□□□□ -0.94
PDGFC-205ENST00000506880 NAB2Q15742 525 aa9.17□□□□□ -0.94
PDGFC-205ENST00000506880 ENOX2Q16206 610 aaKnown RBP9.17□□□□□ -0.94
PDGFC-205ENST00000506880 STX1AQ16623 288 aa9.17□□□□□ -0.94
PDGFC-205ENST00000506880 EPC2Q52LR7 807 aa9.17□□□□□ -0.94
PDGFC-205ENST00000506880 CRELD2Q6UXH1 353 aaPredicted RBP9.17□□□□□ -0.94
PDGFC-205ENST00000506880 PPFIBP1Q86W92 1011 aa9.17□□□□□ -0.94
PDGFC-205ENST00000506880 THNSL1Q8IYQ7 743 aa9.17□□□□□ -0.94
PDGFC-205ENST00000506880 SLC39A11Q8N1S5 342 aa9.17□□□□□ -0.94
PDGFC-205ENST00000506880 IGSF21Q96ID5 467 aa9.17□□□□□ -0.94
PDGFC-205ENST00000506880 GAS2L1Q99501 681 aaPredicted RBP9.17□□□□□ -0.94
PDGFC-205ENST00000506880 NRDE2Q9H7Z3 1164 aa9.17□□□□□ -0.94
PDGFC-205ENST00000506880 MRPL42Q9Y6G3 142 aaKnown RBP9.17□□□□□ -0.94
PDGFC-205ENST00000506880 CHD7Q9P2D1 2997 aa9.17□□□□□ -0.94
PDGFC-205ENST00000506880 MTCL1Q9Y4B5 1905 aaKnown RBP9.17□□□□□ -0.94
PDGFC-205ENST00000506880 ANO9A1A5B4 782 aa9.16□□□□□ -0.94
PDGFC-205ENST00000506880 TTLL13PA6NNM8 815 aa9.16□□□□□ -0.94
PDGFC-205ENST00000506880 PPP1R3GB7ZBB8 358 aa9.16□□□□□ -0.94
PDGFC-205ENST00000506880 PTGESO14684 152 aa9.16□□□□□ -0.94
PDGFC-205ENST00000506880 EFEMP2O95967 443 aa9.16□□□□□ -0.94
PDGFC-205ENST00000506880 TNNC2P02585 160 aa9.16□□□□□ -0.94
PDGFC-205ENST00000506880 CXCL8P10145 99 aa9.16□□□□□ -0.94
PDGFC-205ENST00000506880 FGFR1P11362 822 aa9.16□□□□□ -0.94
PDGFC-205ENST00000506880 P4HA1P13674 534 aa9.16□□□□□ -0.94
PDGFC-205ENST00000506880 TRIM21P19474 475 aaKnown RBP9.16□□□□□ -0.94
PDGFC-205ENST00000506880 CTNNB1P35222 781 aa9.16□□□□□ -0.94
PDGFC-205ENST00000506880 FXR1P51114 621 aaKnown RBP eCLIP9.16□□□□□ -0.94
PDGFC-205ENST00000506880 BCAR1P56945 870 aa9.16□□□□□ -0.94
PDGFC-205ENST00000506880 SPAG1Q07617 926 aa9.16□□□□□ -0.94
PDGFC-205ENST00000506880 KCNA1Q09470 495 aa9.16□□□□□ -0.94
PDGFC-205ENST00000506880 MYO1EQ12965 1108 aa9.16□□□□□ -0.94
PDGFC-205ENST00000506880 UPP1Q16831 310 aa9.16□□□□□ -0.94
PDGFC-205ENST00000506880 SPOUT1Q5T280 376 aaKnown RBP9.16□□□□□ -0.94
PDGFC-205ENST00000506880 TTI2Q6NXR4 508 aa9.16□□□□□ -0.94
PDGFC-205ENST00000506880 CYP26C1Q6V0L0 522 aa9.16□□□□□ -0.94
PDGFC-205ENST00000506880 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.16□□□□□ -0.94
PDGFC-205ENST00000506880 RNF168Q8IYW5 571 aaPredicted RBP9.16□□□□□ -0.94
PDGFC-205ENST00000506880 TMEM86AQ8N2M4 240 aa9.16□□□□□ -0.94
PDGFC-205ENST00000506880 RNF169Q8NCN4 708 aa9.16□□□□□ -0.94
PDGFC-205ENST00000506880 APPL2Q8NEU8 664 aa9.16□□□□□ -0.94
PDGFC-205ENST00000506880 ENOX1Q8TC92 643 aaKnown RBP9.16□□□□□ -0.94
PDGFC-205ENST00000506880 PARD3BQ8TEW8 1205 aa9.16□□□□□ -0.94
PDGFC-205ENST00000506880 HDAC7Q8WUI4 952 aa9.16□□□□□ -0.94
PDGFC-205ENST00000506880 MRPL38Q96DV4 380 aaKnown RBP9.16□□□□□ -0.94
PDGFC-205ENST00000506880 ZBTB45Q96K62 511 aaPredicted RBP9.16□□□□□ -0.94
PDGFC-205ENST00000506880 CGRRF1Q99675 332 aa9.16□□□□□ -0.94
PDGFC-205ENST00000506880 CBWD1Q9BRT8 395 aa9.16□□□□□ -0.94
PDGFC-205ENST00000506880 FAM213AQ9BRX8 229 aa9.16□□□□□ -0.94
PDGFC-205ENST00000506880 RHOBTB2Q9BYZ6 727 aa9.16□□□□□ -0.94
PDGFC-205ENST00000506880 SEMA6BQ9H3T3 888 aa9.16□□□□□ -0.94
PDGFC-205ENST00000506880 THAP9Q9H5L6 903 aa9.16□□□□□ -0.94
PDGFC-205ENST00000506880 INTS13Q9NVM9 706 aa9.16□□□□□ -0.94
PDGFC-205ENST00000506880 FNIP2Q9P278 1114 aa9.16□□□□□ -0.94
PDGFC-205ENST00000506880 HSFX1Q9UBD0 423 aa9.16□□□□□ -0.94
PDGFC-205ENST00000506880 ADAM28Q9UKQ2 775 aa9.16□□□□□ -0.94
PDGFC-205ENST00000506880 GDAQ9Y2T3 454 aa9.16□□□□□ -0.94
PDGFC-205ENST00000506880 YBX2Q9Y2T7 364 aaKnown RBP9.16□□□□□ -0.94
PDGFC-205ENST00000506880 GTPBP10A4D1E9 387 aaKnown RBP9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms