RNA–Protein interactions for RNA: ENST00000506783.5

PHF3-208, Transcript of PHD finger protein 3, humanhuman

TSL 1 (best)

Gene PHF3, Length 3,700 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-208ENST00000506783 ACSS2Q9NR19 701 aa10.21□□□□□ -0.77
PHF3-208ENST00000506783 HOMER3Q9NSC5 361 aa10.21□□□□□ -0.77
PHF3-208ENST00000506783 KLHL14Q9P2G3 628 aa10.21□□□□□ -0.77
PHF3-208ENST00000506783 SBDSQ9Y3A5 250 aaKnown RBP eCLIP10.21□□□□□ -0.77
PHF3-208ENST00000506783 NR2E3Q9Y5X4 410 aa10.21□□□□□ -0.77
PHF3-208ENST00000506783 C4AP0C0L4 1744 aa10.21□□□□□ -0.77
PHF3-208ENST00000506783 C4BP0C0L5 1744 aa10.21□□□□□ -0.77
PHF3-208ENST00000506783 ENO4A6NNW6 628 aa10.21□□□□□ -0.77
PHF3-208ENST00000506783 P4HBP07237 508 aaKnown RBP10.21□□□□□ -0.77
PHF3-208ENST00000506783 COILP38432 576 aaPredicted RBP10.21□□□□□ -0.77
PHF3-208ENST00000506783 HSPA9P38646 679 aaKnown RBP10.21□□□□□ -0.77
PHF3-208ENST00000506783 CETN2P41208 172 aa10.21□□□□□ -0.77
PHF3-208ENST00000506783 NPTX2P47972 431 aa10.21□□□□□ -0.77
PHF3-208ENST00000506783 ARSEP51690 589 aa10.21□□□□□ -0.77
PHF3-208ENST00000506783 AMHR2Q16671 573 aa10.21□□□□□ -0.77
PHF3-208ENST00000506783 TAOK1Q7L7X3 1001 aa10.21□□□□□ -0.77
PHF3-208ENST00000506783 SLC13A5Q86YT5 568 aaPredicted RBP10.21□□□□□ -0.77
PHF3-208ENST00000506783 FMNL3Q8IVF7 1028 aa10.21□□□□□ -0.77
PHF3-208ENST00000506783 CCDC89Q8N998 374 aa10.21□□□□□ -0.77
PHF3-208ENST00000506783 GLIS1Q8NBF1 620 aa10.21□□□□□ -0.77
PHF3-208ENST00000506783 SCFD2Q8WU76 684 aa10.21□□□□□ -0.77
PHF3-208ENST00000506783 KREMEN1Q96MU8 473 aa10.21□□□□□ -0.77
PHF3-208ENST00000506783 RBM15Q96T37 977 aaKnown RBP eCLIP10.21□□□□□ -0.77
PHF3-208ENST00000506783 HSD17B14Q9BPX1 270 aa10.21□□□□□ -0.77
PHF3-208ENST00000506783 PABPC3Q9H361 631 aaKnown RBP10.21□□□□□ -0.77
PHF3-208ENST00000506783 NPHS2Q9NP85 383 aa10.21□□□□□ -0.77
PHF3-208ENST00000506783 RNF146Q9NTX7 359 aa10.21□□□□□ -0.77
PHF3-208ENST00000506783 RAB20Q9NX57 234 aa10.21□□□□□ -0.77
PHF3-208ENST00000506783 SUCLA2Q9P2R7 463 aaPredicted RBP10.21□□□□□ -0.77
PHF3-208ENST00000506783 HAO1Q9UJM8 370 aa10.21□□□□□ -0.77
PHF3-208ENST00000506783 TRAF3IP3Q9Y228 551 aa10.21□□□□□ -0.77
PHF3-208ENST00000506783 RARRES1P49788 294 aa10.21□□□□□ -0.78
PHF3-208ENST00000506783 RGS7P49802 495 aa10.21□□□□□ -0.78
PHF3-208ENST00000506783 SPIRE1Q08AE8 756 aa10.21□□□□□ -0.78
PHF3-208ENST00000506783 PDIA2Q13087 525 aaKnown RBP10.21□□□□□ -0.78
PHF3-208ENST00000506783 KRT39Q6A163 491 aa10.21□□□□□ -0.78
PHF3-208ENST00000506783 RSBN1LQ6PCB5 846 aaPredicted RBP10.21□□□□□ -0.78
PHF3-208ENST00000506783 CYP4X1Q8N118 509 aa10.21□□□□□ -0.78
PHF3-208ENST00000506783 FBXL13Q8NEE6 735 aa10.21□□□□□ -0.78
PHF3-208ENST00000506783 PPP1R14CQ8TAE6 165 aa10.21□□□□□ -0.78
PHF3-208ENST00000506783 WRNIP1Q96S55 665 aa10.21□□□□□ -0.78
PHF3-208ENST00000506783 ZSWIM1Q9BR11 485 aa10.21□□□□□ -0.78
PHF3-208ENST00000506783 CCDC77Q9BR77 488 aa10.21□□□□□ -0.78
PHF3-208ENST00000506783 MSTO1Q9BUK6 570 aa10.21□□□□□ -0.78
PHF3-208ENST00000506783 NSRP1Q9H0G5 558 aaKnown RBP10.21□□□□□ -0.78
PHF3-208ENST00000506783 RPAP3Q9H6T3 665 aaPredicted RBP10.21□□□□□ -0.78
PHF3-208ENST00000506783 PRM3Q9NNZ6 103 aa10.21□□□□□ -0.78
PHF3-208ENST00000506783 NYAP2Q9P242 653 aa10.21□□□□□ -0.78
PHF3-208ENST00000506783 ZNF70Q9UC06 446 aaPredicted RBP10.21□□□□□ -0.78
PHF3-208ENST00000506783 VAV3Q9UKW4 847 aa10.21□□□□□ -0.78
PHF3-208ENST00000506783 INPP5FQ9Y2H2 1132 aa10.21□□□□□ -0.78
PHF3-208ENST00000506783 MYH11P35749 1972 aa10.2□□□□□ -0.78
PHF3-208ENST00000506783 CFAP69A5D8W1 941 aa10.2□□□□□ -0.78
PHF3-208ENST00000506783 BAG2O95816 211 aa10.2□□□□□ -0.78
PHF3-208ENST00000506783 GNA15P30679 374 aa10.2□□□□□ -0.78
PHF3-208ENST00000506783 TNFAIP1Q13829 316 aa10.2□□□□□ -0.78
PHF3-208ENST00000506783 C1orf228Q6PIY5 440 aa10.2□□□□□ -0.78
PHF3-208ENST00000506783 PALM2Q8IXS6 379 aa10.2□□□□□ -0.78
PHF3-208ENST00000506783 HACE1Q8IYU2 909 aa10.2□□□□□ -0.78
PHF3-208ENST00000506783 DAW1Q8N136 415 aa10.2□□□□□ -0.78
PHF3-208ENST00000506783 ERP27Q96DN0 273 aa10.2□□□□□ -0.78
PHF3-208ENST00000506783 IQCDQ96DY2 449 aa10.2□□□□□ -0.78
PHF3-208ENST00000506783 CFAP36Q96G28 342 aa10.2□□□□□ -0.78
PHF3-208ENST00000506783 NAP1L4Q99733 375 aaKnown RBP10.2□□□□□ -0.78
PHF3-208ENST00000506783 GLT8D2Q9H1C3 349 aa10.2□□□□□ -0.78
PHF3-208ENST00000506783 EFCC1Q9HA90 598 aa10.2□□□□□ -0.78
PHF3-208ENST00000506783 CNTRLQ7Z7A1 2325 aa10.2□□□□□ -0.78
PHF3-208ENST00000506783 XIRP1Q702N8 1843 aaKnown RBP10.2□□□□□ -0.78
PHF3-208ENST00000506783 UMODL1Q5DID0 1318 aa10.2□□□□□ -0.78
PHF3-208ENST00000506783 MYO18AQ92614 2054 aaKnown RBP10.2□□□□□ -0.78
PHF3-208ENST00000506783 F8VP50 259 aa10.2□□□□□ -0.78
PHF3-208ENST00000506783 KIAA0391O15091 583 aaKnown RBP10.2□□□□□ -0.78
PHF3-208ENST00000506783 CBX6O95503 412 aa10.2□□□□□ -0.78
PHF3-208ENST00000506783 TMEM253P0C7T8 217 aa10.2□□□□□ -0.78
PHF3-208ENST00000506783 SSTR1P30872 391 aa10.2□□□□□ -0.78
PHF3-208ENST00000506783 MSH2P43246 934 aa10.2□□□□□ -0.78
PHF3-208ENST00000506783 PHKA2P46019 1235 aa10.2□□□□□ -0.78
PHF3-208ENST00000506783 GAD2Q05329 585 aa10.2□□□□□ -0.78
PHF3-208ENST00000506783 PPP2R5AQ15172 486 aa10.2□□□□□ -0.78
PHF3-208ENST00000506783 DACT2Q5SW24 774 aa10.2□□□□□ -0.78
PHF3-208ENST00000506783 MKNK1Q9BUB5 465 aa10.2□□□□□ -0.78
PHF3-208ENST00000506783 CEP41Q9BYV8 373 aa10.2□□□□□ -0.78
PHF3-208ENST00000506783 IQCGQ9H095 443 aaKnown RBP10.2□□□□□ -0.78
PHF3-208ENST00000506783 POLR3FQ9H1D9 316 aaPredicted RBP10.2□□□□□ -0.78
PHF3-208ENST00000506783 FBXO40Q9UH90 709 aa10.2□□□□□ -0.78
PHF3-208ENST00000506783 NLRP11P59045 1033 aaKnown RBP10.2□□□□□ -0.78
PHF3-208ENST00000506783 IFRD2Q12894 506 aaPredicted RBP10.2□□□□□ -0.78
PHF3-208ENST00000506783 EPM2AIP1Q7L775 607 aaPredicted RBP10.2□□□□□ -0.78
PHF3-208ENST00000506783 C1orf131Q8NDD1 294 aaKnown RBP10.2□□□□□ -0.78
PHF3-208ENST00000506783 ACTRT1Q8TDG2 376 aa10.2□□□□□ -0.78
PHF3-208ENST00000506783 EPS8L1Q8TE68 723 aa10.2□□□□□ -0.78
PHF3-208ENST00000506783 UPF1Q92900 1129 aaKnown RBP eCLIP10.2□□□□□ -0.78
PHF3-208ENST00000506783 ANKRD12Q6UB98 2062 aa10.2□□□□□ -0.78
PHF3-208ENST00000506783 MYH3P11055 1940 aa10.2□□□□□ -0.78
PHF3-208ENST00000506783 GAKO14976 1311 aa10.19□□□□□ -0.78
PHF3-208ENST00000506783 CITO14578 2027 aa10.19□□□□□ -0.78
PHF3-208ENST00000506783 hCG_1984214I3L0E3 225 aa10.19□□□□□ -0.78
PHF3-208ENST00000506783 TRAPPC3O43617 180 aa10.19□□□□□ -0.78
PHF3-208ENST00000506783 CLK2P49760 499 aaKnown RBP10.19□□□□□ -0.78
PHF3-208ENST00000506783 LACTBP83111 547 aaPredicted RBP10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms