RNA–Protein interactions for RNA: ENST00000506630.1

TCOF1-209, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 897 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-209ENST00000506630 KREMEN2Q8NCW0 462 aa14.33□□□□□ -0.12
TCOF1-209ENST00000506630 GSTCDQ8NEC7 633 aa14.33□□□□□ -0.12
TCOF1-209ENST00000506630 FEZF2Q8TBJ5 459 aa14.33□□□□□ -0.12
TCOF1-209ENST00000506630 KCNN1Q92952 543 aa14.33□□□□□ -0.12
TCOF1-209ENST00000506630 IGSF21Q96ID5 467 aa14.33□□□□□ -0.12
TCOF1-209ENST00000506630 TCF25Q9BQ70 676 aa14.33□□□□□ -0.12
TCOF1-209ENST00000506630 APOL5Q9BWW9 433 aa14.33□□□□□ -0.12
TCOF1-209ENST00000506630 TRIM9Q9C026 710 aa14.33□□□□□ -0.12
TCOF1-209ENST00000506630 TSHZ2Q9NRE2 1034 aa14.33□□□□□ -0.12
TCOF1-209ENST00000506630 SORCS3Q9UPU3 1222 aa14.33□□□□□ -0.12
TCOF1-209ENST00000506630 PRG3Q9Y2Y8 225 aaPredicted RBP14.33□□□□□ -0.12
TCOF1-209ENST00000506630 ZFHX2Q9C0A1 2572 aaPredicted RBP14.33□□□□□ -0.12
TCOF1-209ENST00000506630 TRIOO75962 3097 aa14.32□□□□□ -0.12
TCOF1-209ENST00000506630 PLXNA3P51805 1871 aa14.32□□□□□ -0.12
TCOF1-209ENST00000506630 FRMD3A2A2Y4 597 aa14.32□□□□□ -0.12
TCOF1-209ENST00000506630 HIDE1A8MVS5 230 aa14.32□□□□□ -0.12
TCOF1-209ENST00000506630 PTGESO14684 152 aa14.32□□□□□ -0.12
TCOF1-209ENST00000506630 FSCN2O14926 492 aa14.32□□□□□ -0.12
TCOF1-209ENST00000506630 NR1I2O75469 434 aa14.32□□□□□ -0.12
TCOF1-209ENST00000506630 PDGFBP01127 241 aaPredicted RBP14.32□□□□□ -0.12
TCOF1-209ENST00000506630 PIGRP01833 764 aa14.32□□□□□ -0.12
TCOF1-209ENST00000506630 ALDH2P05091 517 aa14.32□□□□□ -0.12
TCOF1-209ENST00000506630 THP07101 528 aa14.32□□□□□ -0.12
TCOF1-209ENST00000506630 AFMP43652 599 aa14.32□□□□□ -0.12
TCOF1-209ENST00000506630 DSC1Q08554 894 aa14.32□□□□□ -0.12
TCOF1-209ENST00000506630 KCNC3Q14003 757 aa14.32□□□□□ -0.12
TCOF1-209ENST00000506630 SEZ6Q53EL9 994 aa14.32□□□□□ -0.12
TCOF1-209ENST00000506630 CES5AQ6NT32 575 aa14.32□□□□□ -0.12
TCOF1-209ENST00000506630 SYCE2Q6PIF2 218 aa14.32□□□□□ -0.12
TCOF1-209ENST00000506630 ZNF720Q7Z2F6 126 aa14.32□□□□□ -0.12
TCOF1-209ENST00000506630 MAP4K3Q8IVH8 894 aa14.32□□□□□ -0.12
TCOF1-209ENST00000506630 FSIP1Q8NA03 581 aa14.32□□□□□ -0.12
TCOF1-209ENST00000506630 BCL7CQ8WUZ0 217 aaPredicted RBP14.32□□□□□ -0.12
TCOF1-209ENST00000506630 HVCN1Q96D96 273 aa14.32□□□□□ -0.12
TCOF1-209ENST00000506630 CXCL16Q9H2A7 254 aa14.32□□□□□ -0.12
TCOF1-209ENST00000506630 BLZF1Q9H2G9 400 aa14.32□□□□□ -0.12
TCOF1-209ENST00000506630 ST6GALNAC4Q9H4F1 302 aa14.32□□□□□ -0.12
TCOF1-209ENST00000506630 TOPORSQ9NS56 1045 aaPredicted RBP14.32□□□□□ -0.12
TCOF1-209ENST00000506630 SERTAD1Q9UHV2 236 aa14.32□□□□□ -0.12
TCOF1-209ENST00000506630 CDH22Q9UJ99 828 aa14.32□□□□□ -0.12
TCOF1-209ENST00000506630 MTCL1Q9Y4B5 1905 aaKnown RBP14.32□□□□□ -0.12
TCOF1-209ENST00000506630 CASTOR2A6NHX0 329 aa14.31□□□□□ -0.12
TCOF1-209ENST00000506630 MYBP10242 640 aa14.31□□□□□ -0.12
TCOF1-209ENST00000506630 CASP1P29466 404 aa14.31□□□□□ -0.12
TCOF1-209ENST00000506630 SYKP43405 635 aa14.31□□□□□ -0.12
TCOF1-209ENST00000506630 MCL1Q07820 350 aa14.31□□□□□ -0.12
TCOF1-209ENST00000506630 TMC7Q7Z402 723 aa14.31□□□□□ -0.12
TCOF1-209ENST00000506630 GRAMD1CQ8IYS0 662 aa14.31□□□□□ -0.12
TCOF1-209ENST00000506630 VPS52Q8N1B4 723 aa14.31□□□□□ -0.12
TCOF1-209ENST00000506630 CASP10Q92851 521 aa14.31□□□□□ -0.12
TCOF1-209ENST00000506630 NECTIN4Q96NY8 510 aa14.31□□□□□ -0.12
TCOF1-209ENST00000506630 ACAP3Q96P50 834 aa14.31□□□□□ -0.12
TCOF1-209ENST00000506630 C7orf25Q9BPX7 421 aa14.31□□□□□ -0.12
TCOF1-209ENST00000506630 HAPLN2Q9GZV7 340 aa14.31□□□□□ -0.12
TCOF1-209ENST00000506630 OLFML3Q9NRN5 406 aa14.31□□□□□ -0.12
TCOF1-209ENST00000506630 MARCH5Q9NX47 278 aa14.31□□□□□ -0.12
TCOF1-209ENST00000506630 CACNG4Q9UBN1 327 aa14.31□□□□□ -0.12
TCOF1-209ENST00000506630 EXOC7Q9UPT5 735 aa14.31□□□□□ -0.12
TCOF1-209ENST00000506630 KMT2EQ8IZD2 1858 aa14.31□□□□□ -0.12
TCOF1-209ENST00000506630 CACNA1HO95180 2353 aa14.31□□□□□ -0.12
TCOF1-209ENST00000506630 ACTN4O43707 911 aaKnown RBP14.3□□□□□ -0.12
TCOF1-209ENST00000506630 PPP1R37O75864 691 aa14.3□□□□□ -0.12
TCOF1-209ENST00000506630 CASP5P51878 434 aa14.3□□□□□ -0.12
TCOF1-209ENST00000506630 NDUFA8P51970 172 aa14.3□□□□□ -0.12
TCOF1-209ENST00000506630 ITIH3Q06033 890 aa14.3□□□□□ -0.12
TCOF1-209ENST00000506630 TUSC3Q13454 348 aa14.3□□□□□ -0.12
TCOF1-209ENST00000506630 ALCAMQ13740 583 aa14.3□□□□□ -0.12
TCOF1-209ENST00000506630 SMC1AQ14683 1233 aaKnown RBP14.3□□□□□ -0.12
TCOF1-209ENST00000506630 BMS1Q14692 1282 aaKnown RBP14.3□□□□□ -0.12
TCOF1-209ENST00000506630 L1TD1Q5T7N2 865 aaKnown RBP14.3□□□□□ -0.12
TCOF1-209ENST00000506630 SLC39A4Q6P5W5 647 aa14.3□□□□□ -0.12
TCOF1-209ENST00000506630 ASCL5Q7RTU5 278 aa14.3□□□□□ -0.12
TCOF1-209ENST00000506630 DDX53Q86TM3 631 aaKnown RBP14.3□□□□□ -0.12
TCOF1-209ENST00000506630 RABGGTAQ92696 567 aa14.3□□□□□ -0.12
TCOF1-209ENST00000506630 ACCSQ96QU6 501 aa14.3□□□□□ -0.12
TCOF1-209ENST00000506630 MSTO1Q9BUK6 570 aa14.3□□□□□ -0.12
TCOF1-209ENST00000506630 COLEC11Q9BWP8 271 aa14.3□□□□□ -0.12
TCOF1-209ENST00000506630 FGFBP2Q9BYJ0 223 aa14.3□□□□□ -0.12
TCOF1-209ENST00000506630 ZBP1Q9H171 429 aa14.3□□□□□ -0.12
TCOF1-209ENST00000506630 CIZ1Q9ULV3 898 aaPredicted RBP14.3□□□□□ -0.12
TCOF1-209ENST00000506630 HPSEQ9Y251 543 aa14.3□□□□□ -0.12
TCOF1-209ENST00000506630 PCDHB13Q9Y5F0 798 aa14.3□□□□□ -0.12
TCOF1-209ENST00000506630 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP14.29□□□□□ -0.12
TCOF1-209ENST00000506630 A0A1W2PQ27 194 aa14.29□□□□□ -0.12
TCOF1-209ENST00000506630 A0A1W2PQ64 194 aa14.29□□□□□ -0.12
TCOF1-209ENST00000506630 A0A1W2PQD8 194 aa14.29□□□□□ -0.12
TCOF1-209ENST00000506630 GOLGA6L4A6NEF3 574 aa14.29□□□□□ -0.12
TCOF1-209ENST00000506630 PRR23AA6NEV1 266 aa14.29□□□□□ -0.12
TCOF1-209ENST00000506630 TISP43B9A030 160 aa14.29□□□□□ -0.12
TCOF1-209ENST00000506630 ANKRD63C9JTQ0 380 aa14.29□□□□□ -0.12
TCOF1-209ENST00000506630 F8W810 466 aa14.29□□□□□ -0.12
TCOF1-209ENST00000506630 SLFN14P0C7P3 912 aa14.29□□□□□ -0.12
TCOF1-209ENST00000506630 CXCL8P10145 99 aa14.29□□□□□ -0.12
TCOF1-209ENST00000506630 NBL1P41271 181 aa14.29□□□□□ -0.12
TCOF1-209ENST00000506630 TNFSF9P41273 254 aa14.29□□□□□ -0.12
TCOF1-209ENST00000506630 CUL4BQ13620 913 aa14.29□□□□□ -0.12
TCOF1-209ENST00000506630 HSP90AA2PQ14568 343 aaPredicted RBP14.29□□□□□ -0.12
TCOF1-209ENST00000506630 KYAT1Q16773 422 aa14.29□□□□□ -0.12
TCOF1-209ENST00000506630 CNNM4Q6P4Q7 775 aa14.29□□□□□ -0.12
TCOF1-209ENST00000506630 STXBP4Q6ZWJ1 553 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms