RNA–Protein interactions for RNA: ENST00000506368.5

SCLT1-208, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 2,096 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-208ENST00000506368 DENND1AQ8TEH3 1009 aa16.92■□□□□ 0.3
SCLT1-208ENST00000506368 RPGRQ92834 1020 aaKnown RBP16.92■□□□□ 0.3
SCLT1-208ENST00000506368 CELF1Q92879 486 aaKnown RBP16.92■□□□□ 0.3
SCLT1-208ENST00000506368 OPTNQ96CV9 577 aa16.92■□□□□ 0.3
SCLT1-208ENST00000506368 CFAP57Q96MR6 1250 aa16.92■□□□□ 0.3
SCLT1-208ENST00000506368 MBOAT7Q96N66 472 aa16.92■□□□□ 0.3
SCLT1-208ENST00000506368 TTC25Q96NG3 672 aa16.92■□□□□ 0.3
SCLT1-208ENST00000506368 OLFM3Q96PB7 478 aa16.92■□□□□ 0.3
SCLT1-208ENST00000506368 CRAMP1Q96RY5 1269 aa16.92■□□□□ 0.3
SCLT1-208ENST00000506368 MIS12Q9H081 205 aa16.92■□□□□ 0.3
SCLT1-208ENST00000506368 MLXIPLQ9NP71 852 aa16.92■□□□□ 0.3
SCLT1-208ENST00000506368 UVRAGQ9P2Y5 699 aa16.92■□□□□ 0.3
SCLT1-208ENST00000506368 TMCO1Q9UM00 188 aa16.92■□□□□ 0.3
SCLT1-208ENST00000506368 PLIN4Q96Q06 1357 aa16.91■□□□□ 0.3
SCLT1-208ENST00000506368 MYO3BQ8WXR4 1341 aa16.91■□□□□ 0.3
SCLT1-208ENST00000506368 TP73O15350 636 aa16.91■□□□□ 0.3
SCLT1-208ENST00000506368 SETSIPP0DME0 302 aa16.91■□□□□ 0.3
SCLT1-208ENST00000506368 PYGMP11217 842 aa16.91■□□□□ 0.3
SCLT1-208ENST00000506368 ATF2P15336 505 aa16.91■□□□□ 0.3
SCLT1-208ENST00000506368 CASP5P51878 434 aa16.91■□□□□ 0.3
SCLT1-208ENST00000506368 WDR4P57081 412 aaKnown RBP16.91■□□□□ 0.3
SCLT1-208ENST00000506368 GJB7Q6PEY0 223 aa16.91■□□□□ 0.3
SCLT1-208ENST00000506368 STXBP4Q6ZWJ1 553 aa16.91■□□□□ 0.3
SCLT1-208ENST00000506368 STKLD1Q8NE28 680 aa16.91■□□□□ 0.3
SCLT1-208ENST00000506368 SUPT20HQ8NEM7 779 aa16.91■□□□□ 0.3
SCLT1-208ENST00000506368 MIPOL1Q8TD10 442 aa16.91■□□□□ 0.3
SCLT1-208ENST00000506368 SCG3Q8WXD2 468 aaKnown RBP16.91■□□□□ 0.3
SCLT1-208ENST00000506368 MAML1Q92585 1016 aa16.91■□□□□ 0.3
SCLT1-208ENST00000506368 BTBD10Q9BSF8 475 aa16.91■□□□□ 0.3
SCLT1-208ENST00000506368 PIDD1Q9HB75 910 aa16.91■□□□□ 0.3
SCLT1-208ENST00000506368 VAT1LQ9HCJ6 419 aa16.91■□□□□ 0.3
SCLT1-208ENST00000506368 ZNF219Q9P2Y4 722 aaPredicted RBP16.91■□□□□ 0.3
SCLT1-208ENST00000506368 DNAJB4Q9UDY4 337 aa16.91■□□□□ 0.3
SCLT1-208ENST00000506368 MTMR7Q9Y216 660 aa16.91■□□□□ 0.3
SCLT1-208ENST00000506368 PTPN22Q9Y2R2 807 aa16.91■□□□□ 0.3
SCLT1-208ENST00000506368 COMMD3-BMI1R4GMX3 469 aa16.91■□□□□ 0.3
SCLT1-208ENST00000506368 NPHP3-ACAD11A0A0J9YXS1 232 aa16.9■□□□□ 0.3
SCLT1-208ENST00000506368 ENTPD5O75356 428 aa16.9■□□□□ 0.3
SCLT1-208ENST00000506368 TROVE2P10155 538 aaKnown RBP eCLIP16.9■□□□□ 0.3
SCLT1-208ENST00000506368 RPA1P27694 616 aa16.9■□□□□ 0.3
SCLT1-208ENST00000506368 SGO2Q562F6 1265 aa16.9■□□□□ 0.3
SCLT1-208ENST00000506368 PHLDB3Q6NSJ2 640 aa16.9■□□□□ 0.3
SCLT1-208ENST00000506368 FAM47EQ6ZV65 393 aa16.9■□□□□ 0.3
SCLT1-208ENST00000506368 TRABD2AQ86V40 505 aa16.9■□□□□ 0.3
SCLT1-208ENST00000506368 TTC8Q8TAM2 541 aa16.9■□□□□ 0.3
SCLT1-208ENST00000506368 WDR66Q8TBY9 1149 aa16.9■□□□□ 0.3
SCLT1-208ENST00000506368 STMN2Q93045 179 aa16.9■□□□□ 0.3
SCLT1-208ENST00000506368 INTS2Q9H0H0 1204 aaKnown RBP16.9■□□□□ 0.3
SCLT1-208ENST00000506368 ZWILCHQ9H900 591 aa16.9■□□□□ 0.3
SCLT1-208ENST00000506368 CYLDQ9NQC7 956 aa16.9■□□□□ 0.3
SCLT1-208ENST00000506368 ANAPC5Q9UJX4 755 aa16.9■□□□□ 0.3
SCLT1-208ENST00000506368 ANGPTL2Q9UKU9 493 aa16.9■□□□□ 0.3
SCLT1-208ENST00000506368 ZMYM2Q9UBW7 1377 aa16.9■□□□□ 0.3
SCLT1-208ENST00000506368 H0Y3Z8 333 aa16.9■□□□□ 0.3
SCLT1-208ENST00000506368 P4HA2O15460 535 aa16.9■□□□□ 0.3
SCLT1-208ENST00000506368 EXOC3O60645 756 aa16.9■□□□□ 0.3
SCLT1-208ENST00000506368 TBCAO75347 108 aaKnown RBP16.9■□□□□ 0.3
SCLT1-208ENST00000506368 FTLP02792 175 aaPredicted RBP16.9■□□□□ 0.3
SCLT1-208ENST00000506368 IMPDH2P12268 514 aa16.9■□□□□ 0.3
SCLT1-208ENST00000506368 TGFB2P61812 414 aa16.9■□□□□ 0.3
SCLT1-208ENST00000506368 CENPCQ03188 943 aa16.9■□□□□ 0.3
SCLT1-208ENST00000506368 MYBPC2Q14324 1141 aa16.9■□□□□ 0.3
SCLT1-208ENST00000506368 KYNUQ16719 465 aa16.9■□□□□ 0.3
SCLT1-208ENST00000506368 CCDC89Q8N998 374 aa16.9■□□□□ 0.3
SCLT1-208ENST00000506368 ZNF184Q99676 751 aaPredicted RBP16.9■□□□□ 0.3
SCLT1-208ENST00000506368 REEP2Q9BRK0 252 aa16.9■□□□□ 0.3
SCLT1-208ENST00000506368 CENPKQ9BS16 269 aa16.9■□□□□ 0.3
SCLT1-208ENST00000506368 SEPT11Q9NVA2 429 aaKnown RBP16.9■□□□□ 0.3
SCLT1-208ENST00000506368 ATXN10Q9UBB4 475 aa16.9■□□□□ 0.3
SCLT1-208ENST00000506368 PCDHB13Q9Y5F0 798 aa16.9■□□□□ 0.3
SCLT1-208ENST00000506368 ARFGEF1Q9Y6D6 1849 aa16.89■□□□□ 0.29
SCLT1-208ENST00000506368 SPOPO43791 374 aa16.89■□□□□ 0.29
SCLT1-208ENST00000506368 PSMG1O95456 288 aa16.89■□□□□ 0.29
SCLT1-208ENST00000506368 SNHG28P0DPA3 235 aa16.89■□□□□ 0.29
SCLT1-208ENST00000506368 IVDP26440 423 aa16.89■□□□□ 0.29
SCLT1-208ENST00000506368 CDK8P49336 464 aa16.89■□□□□ 0.29
SCLT1-208ENST00000506368 CETN1Q12798 172 aa16.89■□□□□ 0.29
SCLT1-208ENST00000506368 SH2D4BQ5SQS7 431 aa16.89■□□□□ 0.29
SCLT1-208ENST00000506368 AADACL2Q6P093 401 aa16.89■□□□□ 0.29
SCLT1-208ENST00000506368 NLRP9Q7RTR0 991 aa16.89■□□□□ 0.29
SCLT1-208ENST00000506368 MASTLQ96GX5 879 aa16.89■□□□□ 0.29
SCLT1-208ENST00000506368 SMC6Q96SB8 1091 aa16.89■□□□□ 0.29
SCLT1-208ENST00000506368 CPVLQ9H3G5 476 aa16.89■□□□□ 0.29
SCLT1-208ENST00000506368 TTC36A6NLP5 189 aa16.89■□□□□ 0.29
SCLT1-208ENST00000506368 F8W8V4 182 aa16.89■□□□□ 0.29
SCLT1-208ENST00000506368 NPR1P16066 1061 aa16.89■□□□□ 0.29
SCLT1-208ENST00000506368 CHKAP35790 457 aa16.89■□□□□ 0.29
SCLT1-208ENST00000506368 CASP4P49662 377 aa16.89■□□□□ 0.29
SCLT1-208ENST00000506368 ITGA8P53708 1063 aa16.89■□□□□ 0.29
SCLT1-208ENST00000506368 CACNB1Q02641 598 aaPredicted RBP16.89■□□□□ 0.29
SCLT1-208ENST00000506368 DNAJC3Q13217 504 aa16.89■□□□□ 0.29
SCLT1-208ENST00000506368 RCN1Q15293 331 aa16.89■□□□□ 0.29
SCLT1-208ENST00000506368 KHDC1Q4VXA5 237 aaKnown RBP16.89■□□□□ 0.29
SCLT1-208ENST00000506368 TAF1BQ53T94 588 aaPredicted RBP16.89■□□□□ 0.29
SCLT1-208ENST00000506368 ZNF449Q6P9G9 518 aa16.89■□□□□ 0.29
SCLT1-208ENST00000506368 LCA5Q86VQ0 697 aa16.89■□□□□ 0.29
SCLT1-208ENST00000506368 RBM12BQ8IXT5 1001 aaKnown RBP16.89■□□□□ 0.29
SCLT1-208ENST00000506368 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.89■□□□□ 0.29
SCLT1-208ENST00000506368 FRMD4BQ9Y2L6 1034 aa16.89■□□□□ 0.29
SCLT1-208ENST00000506368 DNAJC6O75061 913 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms