RNA–Protein interactions for RNA: ENST00000505998.5

NIPBL-205, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 5

Gene NIPBL, Length 969 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-205ENST00000505998 KRTAP9-4Q9BYQ2 154 aa7.32□□□□□ -1.24
NIPBL-205ENST00000505998 GTPBP4Q9BZE4 634 aaKnown RBP7.32□□□□□ -1.24
NIPBL-205ENST00000505998 FMN1Q68DA7 1419 aa7.32□□□□□ -1.24
NIPBL-205ENST00000505998 MAPKBP1O60336 1514 aa7.32□□□□□ -1.24
NIPBL-205ENST00000505998 KDM5BQ9UGL1 1544 aa7.32□□□□□ -1.24
NIPBL-205ENST00000505998 FYCO1Q9BQS8 1478 aa7.31□□□□□ -1.24
NIPBL-205ENST00000505998 CXorf49A8MYA2 514 aaPredicted RBP7.31□□□□□ -1.24
NIPBL-205ENST00000505998 GOLGA6L6A8MZA4 724 aa7.31□□□□□ -1.24
NIPBL-205ENST00000505998 B8ZZF3 427 aa7.31□□□□□ -1.24
NIPBL-205ENST00000505998 WNT10BO00744 389 aa7.31□□□□□ -1.24
NIPBL-205ENST00000505998 ATP5JP18859 108 aa7.31□□□□□ -1.24
NIPBL-205ENST00000505998 ALDH1A3P47895 512 aa7.31□□□□□ -1.24
NIPBL-205ENST00000505998 CLRN1P58418 232 aa7.31□□□□□ -1.24
NIPBL-205ENST00000505998 TARDBPQ13148 414 aaKnown RBP eCLIP7.31□□□□□ -1.24
NIPBL-205ENST00000505998 MTM1Q13496 603 aa7.31□□□□□ -1.24
NIPBL-205ENST00000505998 DCAF17Q5H9S7 520 aaPredicted RBP7.31□□□□□ -1.24
NIPBL-205ENST00000505998 METTL24Q5JXM2 366 aa7.31□□□□□ -1.24
NIPBL-205ENST00000505998 LCE4AQ5TA78 99 aa7.31□□□□□ -1.24
NIPBL-205ENST00000505998 Q6ZRM9 215 aa7.31□□□□□ -1.24
NIPBL-205ENST00000505998 PRR18Q8N4B5 295 aa7.31□□□□□ -1.24
NIPBL-205ENST00000505998 OR52N2Q8NGI0 321 aa7.31□□□□□ -1.24
NIPBL-205ENST00000505998 SLC35B2Q8TB61 432 aa7.31□□□□□ -1.24
NIPBL-205ENST00000505998 TFAP2CQ92754 450 aa7.31□□□□□ -1.24
NIPBL-205ENST00000505998 PGBD4Q96DM1 585 aa7.31□□□□□ -1.24
NIPBL-205ENST00000505998 CLPTM1LQ96KA5 538 aa7.31□□□□□ -1.24
NIPBL-205ENST00000505998 MRI1Q9BV20 369 aa7.31□□□□□ -1.24
NIPBL-205ENST00000505998 GPR87Q9BY21 358 aa7.31□□□□□ -1.24
NIPBL-205ENST00000505998 NOB1Q9ULX3 412 aaKnown RBP7.31□□□□□ -1.24
NIPBL-205ENST00000505998 RUVBL1Q9Y265 456 aaKnown RBP7.31□□□□□ -1.24
NIPBL-205ENST00000505998 PCDHB1Q9Y5F3 818 aa7.31□□□□□ -1.24
NIPBL-205ENST00000505998 MAP3K1Q13233 1512 aa7.31□□□□□ -1.24
NIPBL-205ENST00000505998 OFD1O75665 1012 aa7.3□□□□□ -1.24
NIPBL-205ENST00000505998 HSPA6P17066 643 aa7.3□□□□□ -1.24
NIPBL-205ENST00000505998 MAN2A2P49641 1150 aa7.3□□□□□ -1.24
NIPBL-205ENST00000505998 RABGGTBP53611 331 aa7.3□□□□□ -1.24
NIPBL-205ENST00000505998 RAP2BP61225 183 aa7.3□□□□□ -1.24
NIPBL-205ENST00000505998 ATP8B2P98198 1209 aa7.3□□□□□ -1.24
NIPBL-205ENST00000505998 CNGB1Q14028 1251 aaPredicted RBP7.3□□□□□ -1.24
NIPBL-205ENST00000505998 R3HDM1Q15032 1099 aaKnown RBP7.3□□□□□ -1.24
NIPBL-205ENST00000505998 ATP2B3Q16720 1220 aa7.3□□□□□ -1.24
NIPBL-205ENST00000505998 BMT2Q1RMZ1 405 aa7.3□□□□□ -1.24
NIPBL-205ENST00000505998 OTUD7BQ6GQQ9 843 aa7.3□□□□□ -1.24
NIPBL-205ENST00000505998 EFCAB12Q6NXP0 572 aa7.3□□□□□ -1.24
NIPBL-205ENST00000505998 GADL1Q6ZQY3 521 aa7.3□□□□□ -1.24
NIPBL-205ENST00000505998 GPRIN1Q7Z2K8 1008 aa7.3□□□□□ -1.24
NIPBL-205ENST00000505998 ZFP28Q8NHY6 868 aa7.3□□□□□ -1.24
NIPBL-205ENST00000505998 LRGUKQ96M69 825 aa7.3□□□□□ -1.24
NIPBL-205ENST00000505998 MNTQ99583 582 aa7.3□□□□□ -1.24
NIPBL-205ENST00000505998 C1QTNF3Q9BXJ4 246 aa7.3□□□□□ -1.24
NIPBL-205ENST00000505998 KRTAP3-1Q9BYR8 98 aa7.3□□□□□ -1.24
NIPBL-205ENST00000505998 CPEB1Q9BZB8 566 aaKnown RBP7.3□□□□□ -1.24
NIPBL-205ENST00000505998 POGKQ9P215 609 aa7.3□□□□□ -1.24
NIPBL-205ENST00000505998 TESMINQ9Y4I5 508 aa7.3□□□□□ -1.24
NIPBL-205ENST00000505998 ZCCHC11Q5TAX3 1644 aaKnown RBP7.3□□□□□ -1.24
NIPBL-205ENST00000505998 NUP153P49790 1475 aaKnown RBP7.3□□□□□ -1.24
NIPBL-205ENST00000505998 FHOD3Q2V2M9 1422 aa7.29□□□□□ -1.24
NIPBL-205ENST00000505998 VPS8Q8N3P4 1428 aa7.29□□□□□ -1.24
NIPBL-205ENST00000505998 CASKIN1Q8WXD9 1431 aa7.29□□□□□ -1.24
NIPBL-205ENST00000505998 TSPAN6O43657 245 aa7.29□□□□□ -1.24
NIPBL-205ENST00000505998 U2AF1L5P0DN76 240 aaPredicted RBP7.29□□□□□ -1.24
NIPBL-205ENST00000505998 ACRV1P26436 265 aa7.29□□□□□ -1.24
NIPBL-205ENST00000505998 SCNN1GP51170 649 aa7.29□□□□□ -1.24
NIPBL-205ENST00000505998 CTXN1P60606 82 aa7.29□□□□□ -1.24
NIPBL-205ENST00000505998 U2AF1Q01081 240 aaKnown RBP eCLIP7.29□□□□□ -1.24
NIPBL-205ENST00000505998 RAB39AQ14964 217 aa7.29□□□□□ -1.24
NIPBL-205ENST00000505998 VPS72Q15906 364 aa7.29□□□□□ -1.24
NIPBL-205ENST00000505998 PGS1Q32NB8 556 aa7.29□□□□□ -1.24
NIPBL-205ENST00000505998 ATXN7L2Q5T6C5 722 aaPredicted RBP7.29□□□□□ -1.24
NIPBL-205ENST00000505998 FAM102BQ5T8I3 360 aa7.29□□□□□ -1.24
NIPBL-205ENST00000505998 CXorf57Q6NSI4 855 aaKnown RBP7.29□□□□□ -1.24
NIPBL-205ENST00000505998 NSUN6Q8TEA1 469 aaKnown RBP7.29□□□□□ -1.24
NIPBL-205ENST00000505998 MVB12AQ96EY5 273 aa7.29□□□□□ -1.24
NIPBL-205ENST00000505998 AIFM3Q96NN9 605 aa7.29□□□□□ -1.24
NIPBL-205ENST00000505998 MAP3K14Q99558 947 aa7.29□□□□□ -1.24
NIPBL-205ENST00000505998 NMRK2Q9NPI5 230 aa7.29□□□□□ -1.24
NIPBL-205ENST00000505998 TSC22D4Q9Y3Q8 395 aa7.29□□□□□ -1.24
NIPBL-205ENST00000505998 UACAQ9BZF9 1416 aa7.28□□□□□ -1.24
NIPBL-205ENST00000505998 AP1G1O43747 822 aa7.28□□□□□ -1.24
NIPBL-205ENST00000505998 MGAT1P26572 445 aa7.28□□□□□ -1.24
NIPBL-205ENST00000505998 DSC2Q02487 901 aa7.28□□□□□ -1.24
NIPBL-205ENST00000505998 CREMQ03060 361 aa7.28□□□□□ -1.24
NIPBL-205ENST00000505998 GTF2H3Q13889 308 aa7.28□□□□□ -1.24
NIPBL-205ENST00000505998 RRP1BQ14684 758 aaKnown RBP7.28□□□□□ -1.24
NIPBL-205ENST00000505998 THEMIS2Q5TEJ8 643 aa7.28□□□□□ -1.24
NIPBL-205ENST00000505998 C1QL3Q5VWW1 255 aa7.28□□□□□ -1.24
NIPBL-205ENST00000505998 SEM1Q6ZVN7 128 aa7.28□□□□□ -1.24
NIPBL-205ENST00000505998 PLXDC1Q8IUK5 500 aa7.28□□□□□ -1.24
NIPBL-205ENST00000505998 RNF169Q8NCN4 708 aa7.28□□□□□ -1.24
NIPBL-205ENST00000505998 OR10H5Q8NGA6 315 aa7.28□□□□□ -1.24
NIPBL-205ENST00000505998 IFI44Q8TCB0 444 aa7.28□□□□□ -1.24
NIPBL-205ENST00000505998 HPS3Q969F9 1004 aa7.28□□□□□ -1.24
NIPBL-205ENST00000505998 CLIP3Q96DZ5 547 aa7.28□□□□□ -1.24
NIPBL-205ENST00000505998 MRGPRX4Q96LA9 322 aa7.28□□□□□ -1.24
NIPBL-205ENST00000505998 MAN1C1Q9NR34 630 aa7.28□□□□□ -1.24
NIPBL-205ENST00000505998 AURKAIP1Q9NWT8 199 aaPredicted RBP7.28□□□□□ -1.24
NIPBL-205ENST00000505998 CALCOCO1Q9P1Z2 691 aa7.28□□□□□ -1.24
NIPBL-205ENST00000505998 PLB1Q6P1J6 1458 aa7.28□□□□□ -1.24
NIPBL-205ENST00000505998 PTPRGP23470 1445 aa7.27□□□□□ -1.24
NIPBL-205ENST00000505998 KRTAP23-1A1A580 65 aa7.27□□□□□ -1.25
NIPBL-205ENST00000505998 KLRG2A4D1S0 409 aaPredicted RBP7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms