RNA–Protein interactions for RNA: ENST00000498607.2

SCG5-209, Transcript of secretogranin V, humanhuman

TSL 2

Gene SCG5, Length 853 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCG5-209ENST00000498607 LACTBL1A8MY62 500 aa12.62□□□□□ -0.39
SCG5-209ENST00000498607 MEFVO15553 781 aaPredicted RBP12.62□□□□□ -0.39
SCG5-209ENST00000498607 TIMP1P01033 207 aa12.62□□□□□ -0.39
SCG5-209ENST00000498607 TNNI1P19237 187 aa12.62□□□□□ -0.39
SCG5-209ENST00000498607 GCLMP48507 274 aa12.62□□□□□ -0.39
SCG5-209ENST00000498607 CCL23P55773 120 aa12.62□□□□□ -0.39
SCG5-209ENST00000498607 CCDC173Q0VFZ6 552 aa12.62□□□□□ -0.39
SCG5-209ENST00000498607 CBWD6Q4V339 395 aa12.62□□□□□ -0.39
SCG5-209ENST00000498607 CBWD3Q5JTY5 395 aa12.62□□□□□ -0.39
SCG5-209ENST00000498607 CBWD5Q5RIA9 395 aa12.62□□□□□ -0.39
SCG5-209ENST00000498607 SPECC1LQ69YQ0 1117 aa12.62□□□□□ -0.39
SCG5-209ENST00000498607 GBP6Q6ZN66 633 aa12.62□□□□□ -0.39
SCG5-209ENST00000498607 MRPL10Q7Z7H8 261 aaKnown RBP12.62□□□□□ -0.39
SCG5-209ENST00000498607 NT5DC4Q86YG4 428 aa12.62□□□□□ -0.39
SCG5-209ENST00000498607 DBF4BQ8NFT6 615 aa12.62□□□□□ -0.39
SCG5-209ENST00000498607 LINC01599Q8WXQ3 324 aa12.62□□□□□ -0.39
SCG5-209ENST00000498607 ABHD8Q96I13 439 aa12.62□□□□□ -0.39
SCG5-209ENST00000498607 SCLYQ96I15 445 aa12.62□□□□□ -0.39
SCG5-209ENST00000498607 TSPAN18Q96SJ8 248 aa12.62□□□□□ -0.39
SCG5-209ENST00000498607 POP1Q99575 1024 aaKnown RBP12.62□□□□□ -0.39
SCG5-209ENST00000498607 APOL6Q9BWW8 343 aa12.62□□□□□ -0.39
SCG5-209ENST00000498607 TMEM117Q9H0C3 514 aa12.62□□□□□ -0.39
SCG5-209ENST00000498607 MMRN2Q9H8L6 949 aa12.62□□□□□ -0.39
SCG5-209ENST00000498607 PRDM5Q9NQX1 630 aaPredicted RBP12.62□□□□□ -0.39
SCG5-209ENST00000498607 RGS18Q9NS28 235 aa12.62□□□□□ -0.39
SCG5-209ENST00000498607 C1orf112Q9NSG2 853 aa12.62□□□□□ -0.39
SCG5-209ENST00000498607 SIK3Q9Y2K2 1263 aa12.62□□□□□ -0.39
SCG5-209ENST00000498607 HES2Q9Y543 173 aa12.62□□□□□ -0.39
SCG5-209ENST00000498607 CENPFP49454 3210 aa12.62□□□□□ -0.39
SCG5-209ENST00000498607 PTPRJQ12913 1337 aa12.62□□□□□ -0.39
SCG5-209ENST00000498607 TRIM43BA6NCK2 446 aa12.61□□□□□ -0.39
SCG5-209ENST00000498607 C9IYK1 514 aa12.61□□□□□ -0.39
SCG5-209ENST00000498607 ITGA4P13612 1032 aa12.61□□□□□ -0.39
SCG5-209ENST00000498607 RAG1P15918 1043 aa12.61□□□□□ -0.39
SCG5-209ENST00000498607 ATF7P17544 494 aaPredicted RBP12.61□□□□□ -0.39
SCG5-209ENST00000498607 CETN1Q12798 172 aa12.61□□□□□ -0.39
SCG5-209ENST00000498607 TMEM132DQ14C87 1099 aa12.61□□□□□ -0.39
SCG5-209ENST00000498607 EXOC3L4Q17RC7 722 aa12.61□□□□□ -0.39
SCG5-209ENST00000498607 ZACNQ401N2 412 aa12.61□□□□□ -0.39
SCG5-209ENST00000498607 XKR4Q5GH76 650 aa12.61□□□□□ -0.39
SCG5-209ENST00000498607 COL13A1Q5TAT6 717 aaPredicted RBP12.61□□□□□ -0.39
SCG5-209ENST00000498607 LMBRD2Q68DH5 695 aaPredicted RBP12.61□□□□□ -0.39
SCG5-209ENST00000498607 KRT39Q6A163 491 aa12.61□□□□□ -0.39
SCG5-209ENST00000498607 JADE1Q6IE81 842 aa12.61□□□□□ -0.39
SCG5-209ENST00000498607 C15orf39Q6ZRI6 1047 aa12.61□□□□□ -0.39
SCG5-209ENST00000498607 SLC24A5Q71RS6 500 aa12.61□□□□□ -0.39
SCG5-209ENST00000498607 SV2AQ7L0J3 742 aa12.61□□□□□ -0.39
SCG5-209ENST00000498607 TMC6Q7Z403 805 aa12.61□□□□□ -0.39
SCG5-209ENST00000498607 ECHDC2Q86YB7 292 aa12.61□□□□□ -0.39
SCG5-209ENST00000498607 DRC7Q8IY82 874 aa12.61□□□□□ -0.39
SCG5-209ENST00000498607 EFCAB13Q8IY85 973 aa12.61□□□□□ -0.39
SCG5-209ENST00000498607 ZNF516Q92618 1163 aa12.61□□□□□ -0.39
SCG5-209ENST00000498607 TRIM43Q96BQ3 446 aaPredicted RBP12.61□□□□□ -0.39
SCG5-209ENST00000498607 IQCDQ96DY2 449 aa12.61□□□□□ -0.39
SCG5-209ENST00000498607 PPP1R9BQ96SB3 815 aa12.61□□□□□ -0.39
SCG5-209ENST00000498607 GCNT4Q9P109 453 aa12.61□□□□□ -0.39
SCG5-209ENST00000498607 CNTN3Q9P232 1028 aa12.61□□□□□ -0.39
SCG5-209ENST00000498607 PARP2Q9UGN5 583 aa12.61□□□□□ -0.39
SCG5-209ENST00000498607 DERAQ9Y315 318 aa12.61□□□□□ -0.39
SCG5-209ENST00000498607 COQ4Q9Y3A0 265 aa12.61□□□□□ -0.39
SCG5-209ENST00000498607 C2CD2Q9Y426 696 aa12.61□□□□□ -0.39
SCG5-209ENST00000498607 TTC3P53804 2025 aa12.61□□□□□ -0.39
SCG5-209ENST00000498607 LTBP2Q14767 1821 aa12.6□□□□□ -0.39
SCG5-209ENST00000498607 GOLGA6L6A8MZA4 724 aa12.6□□□□□ -0.39
SCG5-209ENST00000498607 RBAK-RBAKDNI3L0D1 243 aa12.6□□□□□ -0.39
SCG5-209ENST00000498607 TNNC2P02585 160 aa12.6□□□□□ -0.39
SCG5-209ENST00000498607 C4BPAP04003 597 aaKnown RBP12.6□□□□□ -0.39
SCG5-209ENST00000498607 NFICP08651 508 aa12.6□□□□□ -0.39
SCG5-209ENST00000498607 TMEM191BP0C7N4 346 aa12.6□□□□□ -0.39
SCG5-209ENST00000498607 AKAP5P24588 427 aa12.6□□□□□ -0.39
SCG5-209ENST00000498607 FAM189BP81408 668 aa12.6□□□□□ -0.39
SCG5-209ENST00000498607 TFAMQ00059 246 aaKnown RBP12.6□□□□□ -0.39
SCG5-209ENST00000498607 KCNMA1Q12791 1236 aa12.6□□□□□ -0.39
SCG5-209ENST00000498607 BIRC3Q13489 604 aa12.6□□□□□ -0.39
SCG5-209ENST00000498607 TRIM14Q14142 442 aa12.6□□□□□ -0.39
SCG5-209ENST00000498607 PTPN21Q16825 1174 aa12.6□□□□□ -0.39
SCG5-209ENST00000498607 DUOXA2Q1HG44 320 aa12.6□□□□□ -0.39
SCG5-209ENST00000498607 EPC2Q52LR7 807 aa12.6□□□□□ -0.39
SCG5-209ENST00000498607 TDRD10Q5VZ19 366 aaKnown RBP12.6□□□□□ -0.39
SCG5-209ENST00000498607 ALKAL1Q6UXT8 129 aa12.6□□□□□ -0.39
SCG5-209ENST00000498607 AGMOQ6ZNB7 445 aa12.6□□□□□ -0.39
SCG5-209ENST00000498607 ZNF598Q86UK7 904 aaKnown RBP12.6□□□□□ -0.39
SCG5-209ENST00000498607 RTN4RL1Q86UN2 441 aaPredicted RBP12.6□□□□□ -0.39
SCG5-209ENST00000498607 FBXL13Q8NEE6 735 aa12.6□□□□□ -0.39
SCG5-209ENST00000498607 OR5B17Q8NGF7 314 aa12.6□□□□□ -0.39
SCG5-209ENST00000498607 CACTINQ8WUQ7 758 aaKnown RBP12.6□□□□□ -0.39
SCG5-209ENST00000498607 PGBD4Q96DM1 585 aa12.6□□□□□ -0.39
SCG5-209ENST00000498607 ANKRD36BP1Q96IX9 119 aa12.6□□□□□ -0.39
SCG5-209ENST00000498607 PCMTD1Q96MG8 357 aaPredicted RBP12.6□□□□□ -0.39
SCG5-209ENST00000498607 CRACR2AQ9BSW2 395 aa12.6□□□□□ -0.39
SCG5-209ENST00000498607 HTATIP2Q9BUP3 242 aa12.6□□□□□ -0.39
SCG5-209ENST00000498607 LSM14BQ9BX40 385 aaKnown RBP12.6□□□□□ -0.39
SCG5-209ENST00000498607 MTMR12Q9C0I1 747 aa12.6□□□□□ -0.39
SCG5-209ENST00000498607 INTS2Q9H0H0 1204 aaKnown RBP12.6□□□□□ -0.39
SCG5-209ENST00000498607 IMPACTQ9P2X3 320 aa12.6□□□□□ -0.39
SCG5-209ENST00000498607 GIT1Q9Y2X7 761 aa12.6□□□□□ -0.39
SCG5-209ENST00000498607 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.6□□□□□ -0.39
SCG5-209ENST00000498607 TDRD15B5MCY1 1934 aaKnown RBP12.59□□□□□ -0.39
SCG5-209ENST00000498607 EOMESO95936 686 aa12.59□□□□□ -0.39
SCG5-209ENST00000498607 HLA-DRAP01903 254 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms