RNA–Protein interactions for RNA: ENST00000498034.5

LMBR1-219, Transcript of limb development membrane protein 1, humanhuman

TSL 3

Gene LMBR1, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-219ENST00000498034 PHOX2BQ99453 314 aa22.28■■□□□ 1.16
LMBR1-219ENST00000498034 TOPORSQ9NS56 1045 aaPredicted RBP22.28■■□□□ 1.16
LMBR1-219ENST00000498034 I3L4J1 428 aa22.27■■□□□ 1.16
LMBR1-219ENST00000498034 STRN3Q13033 797 aa22.27■■□□□ 1.16
LMBR1-219ENST00000498034 PDXDC1Q6P996 788 aa22.27■■□□□ 1.16
LMBR1-219ENST00000498034 SNX27Q96L92 541 aa22.27■■□□□ 1.16
LMBR1-219ENST00000498034 IGSF9Q9P2J2 1179 aa22.27■■□□□ 1.16
LMBR1-219ENST00000498034 WDFY4Q6ZS81 3184 aa22.26■■□□□ 1.15
LMBR1-219ENST00000498034 MEFVO15553 781 aaPredicted RBP22.26■■□□□ 1.15
LMBR1-219ENST00000498034 MAPTP10636 758 aaKnown RBP22.26■■□□□ 1.15
LMBR1-219ENST00000498034 TKTP29401 623 aaKnown RBP22.26■■□□□ 1.15
LMBR1-219ENST00000498034 OR1D2P34982 312 aa22.26■■□□□ 1.15
LMBR1-219ENST00000498034 SMTNP53814 917 aa22.26■■□□□ 1.15
LMBR1-219ENST00000498034 SEZ6Q53EL9 994 aa22.26■■□□□ 1.15
LMBR1-219ENST00000498034 ARSHQ5FYA8 562 aa22.26■■□□□ 1.15
LMBR1-219ENST00000498034 RSPO2Q6UXX9 243 aaPredicted RBP22.26■■□□□ 1.15
LMBR1-219ENST00000498034 GET4Q7L5D6 327 aaPredicted RBP22.26■■□□□ 1.15
LMBR1-219ENST00000498034 LRRC15Q8TF66 581 aa22.26■■□□□ 1.15
LMBR1-219ENST00000498034 MFSD1Q9H3U5 465 aa22.26■■□□□ 1.15
LMBR1-219ENST00000498034 EPS15L1Q9UBC2 864 aa22.26■■□□□ 1.15
LMBR1-219ENST00000498034 MTRRQ9UBK8 725 aa22.26■■□□□ 1.15
LMBR1-219ENST00000498034 DUSP12Q9UNI6 340 aa22.26■■□□□ 1.15
LMBR1-219ENST00000498034 ZDBF2Q9HCK1 2354 aa22.26■■□□□ 1.15
LMBR1-219ENST00000498034 NARSO43776 548 aaKnown RBP22.25■■□□□ 1.15
LMBR1-219ENST00000498034 C8AP07357 584 aa22.25■■□□□ 1.15
LMBR1-219ENST00000498034 GRIN1Q05586 938 aa22.25■■□□□ 1.15
LMBR1-219ENST00000498034 RAB33AQ14088 237 aa22.25■■□□□ 1.15
LMBR1-219ENST00000498034 LIN9Q5TKA1 542 aa22.25■■□□□ 1.15
LMBR1-219ENST00000498034 GRASPQ7Z6J2 395 aaPredicted RBP22.25■■□□□ 1.15
LMBR1-219ENST00000498034 TMEM105Q8N8V8 129 aa22.25■■□□□ 1.15
LMBR1-219ENST00000498034 DDX27Q96GQ7 796 aaKnown RBP22.25■■□□□ 1.15
LMBR1-219ENST00000498034 AK8Q96MA6 479 aa22.25■■□□□ 1.15
LMBR1-219ENST00000498034 SLC38A7Q9NVC3 462 aa22.25■■□□□ 1.15
LMBR1-219ENST00000498034 KCND2Q9NZV8 630 aa22.25■■□□□ 1.15
LMBR1-219ENST00000498034 ANKFY1Q9P2R3 1169 aa22.25■■□□□ 1.15
LMBR1-219ENST00000498034 KCNG1Q9UIX4 513 aa22.25■■□□□ 1.15
LMBR1-219ENST00000498034 CITO14578 2027 aa22.24■■□□□ 1.15
LMBR1-219ENST00000498034 DOCK6Q96HP0 2047 aa22.24■■□□□ 1.15
LMBR1-219ENST00000498034 DOCK8Q8NF50 2099 aa22.24■■□□□ 1.15
LMBR1-219ENST00000498034 PODXLO00592 558 aa22.24■■□□□ 1.15
LMBR1-219ENST00000498034 TRAPPC3O43617 180 aa22.24■■□□□ 1.15
LMBR1-219ENST00000498034 TOM1L1O75674 476 aa22.24■■□□□ 1.15
LMBR1-219ENST00000498034 KCNE1P15382 129 aa22.24■■□□□ 1.15
LMBR1-219ENST00000498034 UBA7P41226 1012 aa22.24■■□□□ 1.15
LMBR1-219ENST00000498034 NTHL1P78549 312 aa22.24■■□□□ 1.15
LMBR1-219ENST00000498034 DHX8Q14562 1220 aaKnown RBP22.24■■□□□ 1.15
LMBR1-219ENST00000498034 NOLC1Q14978 699 aaKnown RBP eCLIP22.24■■□□□ 1.15
LMBR1-219ENST00000498034 PPM1LQ5SGD2 360 aa22.24■■□□□ 1.15
LMBR1-219ENST00000498034 BRAPQ7Z569 592 aa22.24■■□□□ 1.15
LMBR1-219ENST00000498034 C18orf25Q96B23 403 aaPredicted RBP22.24■■□□□ 1.15
LMBR1-219ENST00000498034 CALML4Q96GE6 196 aa22.24■■□□□ 1.15
LMBR1-219ENST00000498034 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP22.24■■□□□ 1.15
LMBR1-219ENST00000498034 CNTN3Q9P232 1028 aa22.24■■□□□ 1.15
LMBR1-219ENST00000498034 CDY1Q9Y6F8 540 aa22.24■■□□□ 1.15
LMBR1-219ENST00000498034 CCL16O15467 120 aa22.23■■□□□ 1.15
LMBR1-219ENST00000498034 HNRNPA1P09651 372 aaKnown RBP eCLIP22.23■■□□□ 1.15
LMBR1-219ENST00000498034 LAMP2P13473 410 aa22.23■■□□□ 1.15
LMBR1-219ENST00000498034 NCKAP1LP55160 1127 aa22.23■■□□□ 1.15
LMBR1-219ENST00000498034 CUL4AQ13619 759 aa22.23■■□□□ 1.15
LMBR1-219ENST00000498034 SF3A1Q15459 793 aaKnown RBP22.23■■□□□ 1.15
LMBR1-219ENST00000498034 SLC10A6Q3KNW5 377 aa22.23■■□□□ 1.15
LMBR1-219ENST00000498034 AXDND1Q5T1B0 1012 aaPredicted RBP22.23■■□□□ 1.15
LMBR1-219ENST00000498034 ASTLQ6HA08 431 aaPredicted RBP22.23■■□□□ 1.15
LMBR1-219ENST00000498034 GPBP1Q86WP2 473 aa22.23■■□□□ 1.15
LMBR1-219ENST00000498034 SLC44A3Q8N4M1 653 aa22.23■■□□□ 1.15
LMBR1-219ENST00000498034 FLCNQ8NFG4 579 aa22.23■■□□□ 1.15
LMBR1-219ENST00000498034 ST13P5Q8NFI4 369 aaPredicted RBP22.23■■□□□ 1.15
LMBR1-219ENST00000498034 SLC7A14Q8TBB6 771 aa22.23■■□□□ 1.15
LMBR1-219ENST00000498034 REEP2Q9BRK0 252 aa22.23■■□□□ 1.15
LMBR1-219ENST00000498034 HAPLN2Q9GZV7 340 aa22.23■■□□□ 1.15
LMBR1-219ENST00000498034 BLOC1S4Q9NUP1 217 aa22.23■■□□□ 1.15
LMBR1-219ENST00000498034 LARSQ9P2J5 1176 aaKnown RBP22.23■■□□□ 1.15
LMBR1-219ENST00000498034 FBXL21Q9UKT6 434 aa22.23■■□□□ 1.15
LMBR1-219ENST00000498034 POLIQ9UNA4 740 aa22.23■■□□□ 1.15
LMBR1-219ENST00000498034 VPS37CA5D8V6 355 aaPredicted RBP22.22■■□□□ 1.15
LMBR1-219ENST00000498034 CLDN3O15551 220 aa22.22■■□□□ 1.15
LMBR1-219ENST00000498034 SLC26A4O43511 780 aa22.22■■□□□ 1.15
LMBR1-219ENST00000498034 FSHRP23945 695 aa22.22■■□□□ 1.15
LMBR1-219ENST00000498034 MATR3P43243 847 aaKnown RBP eCLIP22.22■■□□□ 1.152e-6■■■■□ 20.9
LMBR1-219ENST00000498034 ZPBP2Q6X784 338 aa22.22■■□□□ 1.15
LMBR1-219ENST00000498034 ANKS3Q6ZW76 656 aa22.22■■□□□ 1.15
LMBR1-219ENST00000498034 HAUS6Q7Z4H7 955 aa22.22■■□□□ 1.15
LMBR1-219ENST00000498034 FAM86C1Q9NVL1 165 aa22.22■■□□□ 1.15
LMBR1-219ENST00000498034 ODF2LQ9ULJ1 636 aa22.22■■□□□ 1.15
LMBR1-219ENST00000498034 BACE2Q9Y5Z0 518 aa22.22■■□□□ 1.15
LMBR1-219ENST00000498034 H0Y858 1186 aa22.21■■□□□ 1.15
LMBR1-219ENST00000498034 GALR2O43603 387 aaPredicted RBP22.21■■□□□ 1.15
LMBR1-219ENST00000498034 BMP15O95972 392 aa22.21■■□□□ 1.15
LMBR1-219ENST00000498034 CFHP08603 1231 aa22.21■■□□□ 1.15
LMBR1-219ENST00000498034 NPR3P17342 541 aa22.21■■□□□ 1.15
LMBR1-219ENST00000498034 PLCG1P19174 1290 aa22.21■■□□□ 1.15
LMBR1-219ENST00000498034 HOXA9P31269 272 aa22.21■■□□□ 1.15
LMBR1-219ENST00000498034 MCL1Q07820 350 aa22.21■■□□□ 1.15
LMBR1-219ENST00000498034 MCM6Q14566 821 aa22.21■■□□□ 1.15
LMBR1-219ENST00000498034 KARSQ15046 597 aaKnown RBP22.21■■□□□ 1.15
LMBR1-219ENST00000498034 CWF19L1Q69YN2 538 aaKnown RBP22.21■■□□□ 1.15
LMBR1-219ENST00000498034 SIX5Q8N196 739 aa22.21■■□□□ 1.15
LMBR1-219ENST00000498034 TMEM130Q8N3G9 435 aa22.21■■□□□ 1.15
LMBR1-219ENST00000498034 BICD1Q96G01 975 aa22.21■■□□□ 1.15
LMBR1-219ENST00000498034 PDCD11Q14690 1871 aaKnown RBP22.2■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms