RNA–Protein interactions for RNA: ENST00000494047.5

RFC4-214, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 1,393 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-214ENST00000494047 ACAD10Q6JQN1 1059 aa12.28□□□□□ -0.44
RFC4-214ENST00000494047 GJB7Q6PEY0 223 aa12.28□□□□□ -0.44
RFC4-214ENST00000494047 PPP1R21Q6ZMI0 780 aa12.28□□□□□ -0.44
RFC4-214ENST00000494047 MIGA2Q7L4E1 593 aa12.28□□□□□ -0.44
RFC4-214ENST00000494047 CCDC13Q8IYE1 715 aa12.28□□□□□ -0.44
RFC4-214ENST00000494047 DAW1Q8N136 415 aa12.28□□□□□ -0.44
RFC4-214ENST00000494047 PPM1KQ8N3J5 372 aa12.28□□□□□ -0.44
RFC4-214ENST00000494047 PRELID2Q8N945 189 aa12.28□□□□□ -0.44
RFC4-214ENST00000494047 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.28□□□□□ -0.44
RFC4-214ENST00000494047 RAPGEF5Q92565 580 aa12.28□□□□□ -0.44
RFC4-214ENST00000494047 ZNF653Q96CK0 615 aa12.28□□□□□ -0.44
RFC4-214ENST00000494047 ARHGEF26Q96DR7 871 aa12.28□□□□□ -0.44
RFC4-214ENST00000494047 SNF8Q96H20 258 aa12.28□□□□□ -0.44
RFC4-214ENST00000494047 SGSM3Q96HU1 749 aa12.28□□□□□ -0.44
RFC4-214ENST00000494047 IFT74Q96LB3 600 aa12.28□□□□□ -0.44
RFC4-214ENST00000494047 MFSD14AQ96MC6 490 aa12.28□□□□□ -0.44
RFC4-214ENST00000494047 TTC25Q96NG3 672 aa12.28□□□□□ -0.44
RFC4-214ENST00000494047 ZIC5Q96T25 663 aa12.28□□□□□ -0.44
RFC4-214ENST00000494047 NUP85Q9BW27 656 aa12.28□□□□□ -0.44
RFC4-214ENST00000494047 TRAIPQ9BWF2 469 aa12.28□□□□□ -0.44
RFC4-214ENST00000494047 TMEM117Q9H0C3 514 aa12.28□□□□□ -0.44
RFC4-214ENST00000494047 NEUROG2Q9H2A3 272 aa12.28□□□□□ -0.44
RFC4-214ENST00000494047 PLEKHA4Q9H4M7 779 aa12.28□□□□□ -0.44
RFC4-214ENST00000494047 UBN1Q9NPG3 1134 aa12.28□□□□□ -0.44
RFC4-214ENST00000494047 RNF186Q9NXI6 227 aa12.28□□□□□ -0.44
RFC4-214ENST00000494047 DDX20Q9UHI6 824 aaKnown RBP12.28□□□□□ -0.44
RFC4-214ENST00000494047 PCDHB2Q9Y5E7 798 aa12.28□□□□□ -0.44
RFC4-214ENST00000494047 FAM196BA6NMK8 535 aa12.27□□□□□ -0.45
RFC4-214ENST00000494047 SFI1A8K8P3 1242 aa12.27□□□□□ -0.45
RFC4-214ENST00000494047 SMAPO00193 183 aa12.27□□□□□ -0.45
RFC4-214ENST00000494047 RIPK2O43353 540 aa12.27□□□□□ -0.45
RFC4-214ENST00000494047 SORBS3O60504 671 aa12.27□□□□□ -0.45
RFC4-214ENST00000494047 DGAT1O75907 488 aa12.27□□□□□ -0.45
RFC4-214ENST00000494047 ABHD2P08910 425 aa12.27□□□□□ -0.45
RFC4-214ENST00000494047 CYP11B1P15538 503 aa12.27□□□□□ -0.45
RFC4-214ENST00000494047 HNRNPH1P31943 449 aaKnown RBP12.27□□□□□ -0.45
RFC4-214ENST00000494047 TAP1Q03518 808 aa12.27□□□□□ -0.45
RFC4-214ENST00000494047 XRCC4Q13426 336 aa12.27□□□□□ -0.45
RFC4-214ENST00000494047 SGO2Q562F6 1265 aa12.27□□□□□ -0.45
RFC4-214ENST00000494047 ANKRD20A8PQ5CZ79 823 aa12.27□□□□□ -0.45
RFC4-214ENST00000494047 WDR44Q5JSH3 913 aa12.27□□□□□ -0.45
RFC4-214ENST00000494047 SLFN12LQ6IEE8 588 aa12.27□□□□□ -0.45
RFC4-214ENST00000494047 TNS4Q8IZW8 715 aa12.27□□□□□ -0.45
RFC4-214ENST00000494047 GPD1LQ8N335 351 aa12.27□□□□□ -0.45
RFC4-214ENST00000494047 BANK1Q8NDB2 785 aa12.27□□□□□ -0.45
RFC4-214ENST00000494047 FBXO25Q8TCJ0 367 aa12.27□□□□□ -0.45
RFC4-214ENST00000494047 ALG3Q92685 438 aa12.27□□□□□ -0.45
RFC4-214ENST00000494047 WNK4Q96J92 1243 aa12.27□□□□□ -0.45
RFC4-214ENST00000494047 TRIM51Q9BSJ1 452 aa12.27□□□□□ -0.45
RFC4-214ENST00000494047 CFHR5Q9BXR6 569 aa12.27□□□□□ -0.45
RFC4-214ENST00000494047 FRMD8P1Q9BZ68 369 aaPredicted RBP12.27□□□□□ -0.45
RFC4-214ENST00000494047 CELF4Q9BZC1 486 aaKnown RBP12.27□□□□□ -0.45
RFC4-214ENST00000494047 KIAA1683Q9H0B3 1180 aa12.27□□□□□ -0.45
RFC4-214ENST00000494047 RAB20Q9NX57 234 aa12.27□□□□□ -0.45
RFC4-214ENST00000494047 GRHL1Q9NZI5 618 aa12.27□□□□□ -0.45
RFC4-214ENST00000494047 TBX20Q9UMR3 447 aa12.27□□□□□ -0.45
RFC4-214ENST00000494047 NFASCO94856 1347 aa12.26□□□□□ -0.45
RFC4-214ENST00000494047 DHX15O43143 795 aaKnown RBP12.26□□□□□ -0.45
RFC4-214ENST00000494047 ZBED4O75132 1171 aa12.26□□□□□ -0.45
RFC4-214ENST00000494047 TRPA1O75762 1119 aa12.26□□□□□ -0.45
RFC4-214ENST00000494047 ARP10275 920 aa12.26□□□□□ -0.45
RFC4-214ENST00000494047 CCND2P30279 289 aa12.26□□□□□ -0.45
RFC4-214ENST00000494047 GCLMP48507 274 aa12.26□□□□□ -0.45
RFC4-214ENST00000494047 MESDQ14696 234 aa12.26□□□□□ -0.45
RFC4-214ENST00000494047 COG2Q14746 738 aa12.26□□□□□ -0.45
RFC4-214ENST00000494047 STAT4Q14765 748 aa12.26□□□□□ -0.45
RFC4-214ENST00000494047 SNCBQ16143 134 aa12.26□□□□□ -0.45
RFC4-214ENST00000494047 CLEC16AQ2KHT3 1053 aa12.26□□□□□ -0.45
RFC4-214ENST00000494047 ZDHHC24Q6UX98 284 aa12.26□□□□□ -0.45
RFC4-214ENST00000494047 RNF207Q6ZRF8 634 aa12.26□□□□□ -0.45
RFC4-214ENST00000494047 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.26□□□□□ -0.45
RFC4-214ENST00000494047 ARHGEF18Q6ZSZ5 1173 aa12.26□□□□□ -0.45
RFC4-214ENST00000494047 DDX42Q86XP3 938 aaKnown RBP eCLIP12.26□□□□□ -0.45
RFC4-214ENST00000494047 GPIHBP1Q8IV16 184 aa12.26□□□□□ -0.45
RFC4-214ENST00000494047 SPICE1Q8N0Z3 855 aa12.26□□□□□ -0.45
RFC4-214ENST00000494047 ATL2Q8NHH9 583 aa12.26□□□□□ -0.45
RFC4-214ENST00000494047 PARD3BQ8TEW8 1205 aa12.26□□□□□ -0.45
RFC4-214ENST00000494047 HINFPQ9BQA5 517 aa12.26□□□□□ -0.45
RFC4-214ENST00000494047 GOLPH3Q9H4A6 298 aa12.26□□□□□ -0.45
RFC4-214ENST00000494047 KMT5AQ9NQR1 393 aa12.26□□□□□ -0.45
RFC4-214ENST00000494047 KLC4Q9NSK0 619 aa12.26□□□□□ -0.45
RFC4-214ENST00000494047 COG5Q9UP83 839 aa12.26□□□□□ -0.45
RFC4-214ENST00000494047 ARID2Q68CP9 1835 aa12.26□□□□□ -0.45
RFC4-214ENST00000494047 OTOFQ9HC10 1997 aa12.25□□□□□ -0.45
RFC4-214ENST00000494047 CDH16O75309 829 aa12.25□□□□□ -0.45
RFC4-214ENST00000494047 RASSF9O75901 435 aa12.25□□□□□ -0.45
RFC4-214ENST00000494047 SUN1O94901 812 aa12.25□□□□□ -0.45
RFC4-214ENST00000494047 EZRP15311 586 aaKnown RBP12.25□□□□□ -0.45
RFC4-214ENST00000494047 ATF2P15336 505 aa12.25□□□□□ -0.45
RFC4-214ENST00000494047 ITGB5P18084 799 aa12.25□□□□□ -0.45
RFC4-214ENST00000494047 DRD4P21917 467 aa12.25□□□□□ -0.45
RFC4-214ENST00000494047 MAPK4P31152 587 aa12.25□□□□□ -0.45
RFC4-214ENST00000494047 SKIV2L2P42285 1042 aaKnown RBP12.25□□□□□ -0.45
RFC4-214ENST00000494047 NSFP46459 744 aaKnown RBP12.25□□□□□ -0.45
RFC4-214ENST00000494047 SLC18A1P54219 525 aa12.25□□□□□ -0.45
RFC4-214ENST00000494047 COPS2P61201 443 aa12.25□□□□□ -0.45
RFC4-214ENST00000494047 FMO1Q01740 532 aa12.25□□□□□ -0.45
RFC4-214ENST00000494047 MCL1Q07820 350 aa12.25□□□□□ -0.45
RFC4-214ENST00000494047 PPP3CAQ08209 521 aa12.25□□□□□ -0.45
RFC4-214ENST00000494047 RIPK1Q13546 671 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms