RNA–Protein interactions for RNA: ENST00000491860.1

NUP50-217, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 493 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-217ENST00000491860 UPP1Q16831 310 aa9.59□□□□□ -0.87
NUP50-217ENST00000491860 XKR4Q5GH76 650 aa9.59□□□□□ -0.87
NUP50-217ENST00000491860 PPM1LQ5SGD2 360 aa9.59□□□□□ -0.87
NUP50-217ENST00000491860 NT5DC1Q5TFE4 455 aa9.59□□□□□ -0.87
NUP50-217ENST00000491860 EEF1DP3Q658K8 133 aa9.59□□□□□ -0.87
NUP50-217ENST00000491860 KANK3Q6NY19 840 aa9.59□□□□□ -0.87
NUP50-217ENST00000491860 ZPBP2Q6X784 338 aa9.59□□□□□ -0.87
NUP50-217ENST00000491860 C1orf186Q6ZWK4 172 aa9.59□□□□□ -0.87
NUP50-217ENST00000491860 MTSS1LQ765P7 747 aa9.59□□□□□ -0.87
NUP50-217ENST00000491860 BRAPQ7Z569 592 aa9.59□□□□□ -0.87
NUP50-217ENST00000491860 SYT2Q8N9I0 419 aaPredicted RBP9.59□□□□□ -0.87
NUP50-217ENST00000491860 LNX1Q8TBB1 728 aaPredicted RBP9.59□□□□□ -0.87
NUP50-217ENST00000491860 KCNN1Q92952 543 aa9.59□□□□□ -0.87
NUP50-217ENST00000491860 ZNF707Q96C28 371 aaPredicted RBP9.59□□□□□ -0.87
NUP50-217ENST00000491860 CALML4Q96GE6 196 aa9.59□□□□□ -0.87
NUP50-217ENST00000491860 OXCT2Q9BYC2 517 aaPredicted RBP9.59□□□□□ -0.87
NUP50-217ENST00000491860 PTPRHQ9HD43 1115 aa9.59□□□□□ -0.87
NUP50-217ENST00000491860 KCNH3Q9ULD8 1083 aa9.59□□□□□ -0.87
NUP50-217ENST00000491860 ODF2LQ9ULJ1 636 aa9.59□□□□□ -0.87
NUP50-217ENST00000491860 MAFFQ9ULX9 164 aa9.59□□□□□ -0.87
NUP50-217ENST00000491860 SMC3Q9UQE7 1217 aa9.59□□□□□ -0.87
NUP50-217ENST00000491860 ZNF292O60281 2723 aa9.58□□□□□ -0.88
NUP50-217ENST00000491860 DMXL1Q9Y485 3027 aa9.58□□□□□ -0.88
NUP50-217ENST00000491860 SMIM28A0A1B0GU29 152 aa9.58□□□□□ -0.88
NUP50-217ENST00000491860 TTLL13PA6NNM8 815 aa9.58□□□□□ -0.88
NUP50-217ENST00000491860 F8W810 466 aa9.58□□□□□ -0.88
NUP50-217ENST00000491860 XPOTO43592 962 aaKnown RBP9.58□□□□□ -0.88
NUP50-217ENST00000491860 C8AP07357 584 aa9.58□□□□□ -0.88
NUP50-217ENST00000491860 LAMP2P13473 410 aa9.58□□□□□ -0.88
NUP50-217ENST00000491860 AOC1P19801 751 aa9.58□□□□□ -0.88
NUP50-217ENST00000491860 PDCP20941 246 aa9.58□□□□□ -0.88
NUP50-217ENST00000491860 PROZP22891 400 aa9.58□□□□□ -0.88
NUP50-217ENST00000491860 PAX3P23760 479 aa9.58□□□□□ -0.88
NUP50-217ENST00000491860 FSHRP23945 695 aa9.58□□□□□ -0.88
NUP50-217ENST00000491860 GJB2P29033 226 aa9.58□□□□□ -0.88
NUP50-217ENST00000491860 ELF1P32519 619 aa9.58□□□□□ -0.88
NUP50-217ENST00000491860 UBA7P41226 1012 aa9.58□□□□□ -0.88
NUP50-217ENST00000491860 NBR1Q14596 966 aa9.58□□□□□ -0.88
NUP50-217ENST00000491860 NOLC1Q14978 699 aaKnown RBP eCLIP9.58□□□□□ -0.88
NUP50-217ENST00000491860 PRSS55Q6UWB4 352 aaPredicted RBP9.58□□□□□ -0.88
NUP50-217ENST00000491860 ALKAL1Q6UXT8 129 aa9.58□□□□□ -0.88
NUP50-217ENST00000491860 DAW1Q8N136 415 aa9.58□□□□□ -0.88
NUP50-217ENST00000491860 HASPINQ8TF76 798 aa9.58□□□□□ -0.88
NUP50-217ENST00000491860 SHDQ96IW2 340 aa9.58□□□□□ -0.88
NUP50-217ENST00000491860 TMX3Q96JJ7 454 aa9.58□□□□□ -0.88
NUP50-217ENST00000491860 B3GALT6Q96L58 329 aa9.58□□□□□ -0.88
NUP50-217ENST00000491860 CLSTN3Q9BQT9 956 aa9.58□□□□□ -0.88
NUP50-217ENST00000491860 PAAF1Q9BRP4 392 aa9.58□□□□□ -0.88
NUP50-217ENST00000491860 KIFC3Q9BVG8 833 aa9.58□□□□□ -0.88
NUP50-217ENST00000491860 CDT1Q9H211 546 aa9.58□□□□□ -0.88
NUP50-217ENST00000491860 PLEKHA5Q9HAU0 1116 aa9.58□□□□□ -0.88
NUP50-217ENST00000491860 CNTN3Q9P232 1028 aa9.58□□□□□ -0.88
NUP50-217ENST00000491860 MTRRQ9UBK8 725 aa9.58□□□□□ -0.88
NUP50-217ENST00000491860 CDH7Q9ULB5 785 aa9.58□□□□□ -0.88
NUP50-217ENST00000491860 GVINP1Q7Z2Y8 2422 aa9.58□□□□□ -0.88
NUP50-217ENST00000491860 VWA8A3KMH1 1905 aa9.58□□□□□ -0.88
NUP50-217ENST00000491860 ARHGEF37A1IGU5 675 aa9.57□□□□□ -0.88
NUP50-217ENST00000491860 VWA3AA6NCI4 1184 aa9.57□□□□□ -0.88
NUP50-217ENST00000491860 ANHXE9PGG2 379 aa9.57□□□□□ -0.88
NUP50-217ENST00000491860 PODXLO00592 558 aa9.57□□□□□ -0.88
NUP50-217ENST00000491860 SLC16A4O15374 487 aa9.57□□□□□ -0.88
NUP50-217ENST00000491860 CLDN3O15551 220 aa9.57□□□□□ -0.88
NUP50-217ENST00000491860 SPATA31D3P0C874 917 aa9.57□□□□□ -0.88
NUP50-217ENST00000491860 RPL17P18621 184 aaKnown RBP9.57□□□□□ -0.88
NUP50-217ENST00000491860 OR1D2P34982 312 aa9.57□□□□□ -0.88
NUP50-217ENST00000491860 LONP1P36776 959 aaKnown RBP9.57□□□□□ -0.88
NUP50-217ENST00000491860 CLCNKBP51801 687 aa9.57□□□□□ -0.88
NUP50-217ENST00000491860 PFKPQ01813 784 aa9.57□□□□□ -0.88
NUP50-217ENST00000491860 ZRSR1Q15695 479 aaKnown RBP9.57□□□□□ -0.88
NUP50-217ENST00000491860 AXDND1Q5T1B0 1012 aaPredicted RBP9.57□□□□□ -0.88
NUP50-217ENST00000491860 LARP1BQ659C4 914 aaKnown RBP9.57□□□□□ -0.88
NUP50-217ENST00000491860 SLC8B1Q6J4K2 584 aa9.57□□□□□ -0.88
NUP50-217ENST00000491860 PHLDB3Q6NSJ2 640 aa9.57□□□□□ -0.88
NUP50-217ENST00000491860 SPATA31D4Q6ZUB0 917 aa9.57□□□□□ -0.88
NUP50-217ENST00000491860 GET4Q7L5D6 327 aaPredicted RBP9.57□□□□□ -0.88
NUP50-217ENST00000491860 FRMD5Q7Z6J6 570 aa9.57□□□□□ -0.88
NUP50-217ENST00000491860 GLYCTKQ8IVS8 523 aa9.57□□□□□ -0.88
NUP50-217ENST00000491860 ADSSL1Q8N142 457 aa9.57□□□□□ -0.88
NUP50-217ENST00000491860 SIX5Q8N196 739 aa9.57□□□□□ -0.88
NUP50-217ENST00000491860 SLC44A3Q8N4M1 653 aa9.57□□□□□ -0.88
NUP50-217ENST00000491860 APPL2Q8NEU8 664 aa9.57□□□□□ -0.88
NUP50-217ENST00000491860 FLCNQ8NFG4 579 aa9.57□□□□□ -0.88
NUP50-217ENST00000491860 RASSF8Q8NHQ8 419 aa9.57□□□□□ -0.88
NUP50-217ENST00000491860 BORCS6Q96GS4 357 aa9.57□□□□□ -0.88
NUP50-217ENST00000491860 MMTAG2Q9BU76 263 aaKnown RBP9.57□□□□□ -0.88
NUP50-217ENST00000491860 RUSC1Q9BVN2 902 aa9.57□□□□□ -0.88
NUP50-217ENST00000491860 AVENQ9NQS1 362 aaPredicted RBP9.57□□□□□ -0.88
NUP50-217ENST00000491860 SLC2A4RGQ9NR83 387 aa9.57□□□□□ -0.88
NUP50-217ENST00000491860 NUB1Q9Y5A7 615 aa9.57□□□□□ -0.88
NUP50-217ENST00000491860 PDCD11Q14690 1871 aaKnown RBP9.56□□□□□ -0.88
NUP50-217ENST00000491860 PP2D1A8MPX8 630 aa9.56□□□□□ -0.88
NUP50-217ENST00000491860 STK25O00506 426 aa9.56□□□□□ -0.88
NUP50-217ENST00000491860 MICAL2O94851 1124 aa9.56□□□□□ -0.88
NUP50-217ENST00000491860 LRG1P02750 347 aa9.56□□□□□ -0.88
NUP50-217ENST00000491860 EDN1P05305 212 aa9.56□□□□□ -0.88
NUP50-217ENST00000491860 CLTAP09496 248 aa9.56□□□□□ -0.88
NUP50-217ENST00000491860 PLA2G4BP0C869 781 aa9.56□□□□□ -0.88
NUP50-217ENST00000491860 MAPTP10636 758 aaKnown RBP9.56□□□□□ -0.88
NUP50-217ENST00000491860 MARCKSP29966 332 aaPredicted RBP9.56□□□□□ -0.88
NUP50-217ENST00000491860 MATR3P43243 847 aaKnown RBP eCLIP9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms