RNA–Protein interactions for RNA: ENST00000491668.1

SEC61A1-206, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 4

Gene SEC61A1, Length 558 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-206ENST00000491668 GLYCTKQ8IVS8 523 aa13.9□□□□□ -0.18
SEC61A1-206ENST00000491668 TMEM130Q8N3G9 435 aa13.9□□□□□ -0.18
SEC61A1-206ENST00000491668 KRI1Q8N9T8 703 aaKnown RBP13.9□□□□□ -0.18
SEC61A1-206ENST00000491668 KCNN1Q92952 543 aa13.9□□□□□ -0.18
SEC61A1-206ENST00000491668 EPSTI1Q96J88 318 aa13.9□□□□□ -0.18
SEC61A1-206ENST00000491668 CDK5RAP3Q96JB5 506 aa13.9□□□□□ -0.18
SEC61A1-206ENST00000491668 CHAMP1Q96JM3 812 aa13.9□□□□□ -0.18
SEC61A1-206ENST00000491668 SNX27Q96L92 541 aa13.9□□□□□ -0.18
SEC61A1-206ENST00000491668 FBXO2Q9UK22 296 aaPredicted RBP13.9□□□□□ -0.18
SEC61A1-206ENST00000491668 NR2E1Q9Y466 385 aa13.9□□□□□ -0.18
SEC61A1-206ENST00000491668 ARIH1Q9Y4X5 557 aaPredicted RBP13.9□□□□□ -0.18
SEC61A1-206ENST00000491668 MTCL1Q9Y4B5 1905 aaKnown RBP13.9□□□□□ -0.18
SEC61A1-206ENST00000491668 CCDC195A0A1B0GUA6 201 aa13.89□□□□□ -0.19
SEC61A1-206ENST00000491668 TMEM189-UBE2V1I3L0A0 370 aa13.89□□□□□ -0.19
SEC61A1-206ENST00000491668 I3L4J1 428 aa13.89□□□□□ -0.19
SEC61A1-206ENST00000491668 TOM1L1O75674 476 aa13.89□□□□□ -0.19
SEC61A1-206ENST00000491668 C1RP00736 705 aa13.89□□□□□ -0.19
SEC61A1-206ENST00000491668 ASGR2P07307 311 aa13.89□□□□□ -0.19
SEC61A1-206ENST00000491668 FGFR3P22607 806 aa13.89□□□□□ -0.19
SEC61A1-206ENST00000491668 PLA2G5P39877 138 aa13.89□□□□□ -0.19
SEC61A1-206ENST00000491668 NCKAP1LP55160 1127 aa13.89□□□□□ -0.19
SEC61A1-206ENST00000491668 DHX8Q14562 1220 aaKnown RBP13.89□□□□□ -0.19
SEC61A1-206ENST00000491668 SLC10A6Q3KNW5 377 aa13.89□□□□□ -0.19
SEC61A1-206ENST00000491668 SPECC1Q5M775 1068 aa13.89□□□□□ -0.19
SEC61A1-206ENST00000491668 RSPO2Q6UXX9 243 aaPredicted RBP13.89□□□□□ -0.19
SEC61A1-206ENST00000491668 BMP8AQ7Z5Y6 402 aa13.89□□□□□ -0.19
SEC61A1-206ENST00000491668 GPBP1Q86WP2 473 aa13.89□□□□□ -0.19
SEC61A1-206ENST00000491668 ZDHHC14Q8IZN3 488 aa13.89□□□□□ -0.19
SEC61A1-206ENST00000491668 KREMEN2Q8NCW0 462 aa13.89□□□□□ -0.19
SEC61A1-206ENST00000491668 RASSF8Q8NHQ8 419 aa13.89□□□□□ -0.19
SEC61A1-206ENST00000491668 PIK3R5Q8WYR1 880 aa13.89□□□□□ -0.19
SEC61A1-206ENST00000491668 RAD54LQ92698 747 aa13.89□□□□□ -0.19
SEC61A1-206ENST00000491668 C18orf25Q96B23 403 aaPredicted RBP13.89□□□□□ -0.19
SEC61A1-206ENST00000491668 FIZ1Q96SL8 496 aa13.89□□□□□ -0.19
SEC61A1-206ENST00000491668 TTPALQ9BTX7 342 aa13.89□□□□□ -0.19
SEC61A1-206ENST00000491668 RHOBTB2Q9BYZ6 727 aa13.89□□□□□ -0.19
SEC61A1-206ENST00000491668 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.89□□□□□ -0.19
SEC61A1-206ENST00000491668 LIMD1Q9UGP4 676 aa13.89□□□□□ -0.19
SEC61A1-206ENST00000491668 USTQ9Y2C2 406 aa13.89□□□□□ -0.19
SEC61A1-206ENST00000491668 HCN4Q9Y3Q4 1203 aa13.89□□□□□ -0.19
SEC61A1-206ENST00000491668 DOCK6Q96HP0 2047 aa13.88□□□□□ -0.19
SEC61A1-206ENST00000491668 GOLGA6L4A6NEF3 574 aa13.88□□□□□ -0.19
SEC61A1-206ENST00000491668 FAM189A1O60320 539 aa13.88□□□□□ -0.19
SEC61A1-206ENST00000491668 PPP6R2O75170 966 aa13.88□□□□□ -0.19
SEC61A1-206ENST00000491668 B3GAT3O94766 335 aa13.88□□□□□ -0.19
SEC61A1-206ENST00000491668 KCNE1P15382 129 aa13.88□□□□□ -0.19
SEC61A1-206ENST00000491668 TXLNAP40222 546 aa13.88□□□□□ -0.19
SEC61A1-206ENST00000491668 SIGLEC14Q08ET2 396 aa13.88□□□□□ -0.19
SEC61A1-206ENST00000491668 DCLRE1AQ6PJP8 1040 aa13.88□□□□□ -0.19
SEC61A1-206ENST00000491668 ZPBP2Q6X784 338 aa13.88□□□□□ -0.19
SEC61A1-206ENST00000491668 HAUS6Q7Z4H7 955 aa13.88□□□□□ -0.19
SEC61A1-206ENST00000491668 CEP57Q86XR8 500 aa13.88□□□□□ -0.19
SEC61A1-206ENST00000491668 HDAC7Q8WUI4 952 aa13.88□□□□□ -0.19
SEC61A1-206ENST00000491668 LEO1Q8WVC0 666 aaPredicted RBP13.88□□□□□ -0.19
SEC61A1-206ENST00000491668 CALML4Q96GE6 196 aa13.88□□□□□ -0.19
SEC61A1-206ENST00000491668 CLIC6Q96NY7 704 aa13.88□□□□□ -0.19
SEC61A1-206ENST00000491668 TCHPQ9BT92 498 aa13.88□□□□□ -0.19
SEC61A1-206ENST00000491668 CCDC94Q9BW85 323 aaPredicted RBP13.88□□□□□ -0.19
SEC61A1-206ENST00000491668 CCSER1Q9C0I3 900 aa13.88□□□□□ -0.19
SEC61A1-206ENST00000491668 GDPD2Q9HCC8 539 aa13.88□□□□□ -0.19
SEC61A1-206ENST00000491668 WDR6Q9NNW5 1121 aaKnown RBP13.88□□□□□ -0.19
SEC61A1-206ENST00000491668 CNTN3Q9P232 1028 aa13.88□□□□□ -0.19
SEC61A1-206ENST00000491668 ANKFY1Q9P2R3 1169 aa13.88□□□□□ -0.19
SEC61A1-206ENST00000491668 RCOR1Q9UKL0 485 aa13.88□□□□□ -0.19
SEC61A1-206ENST00000491668 ODF2LQ9ULJ1 636 aa13.88□□□□□ -0.19
SEC61A1-206ENST00000491668 SRPRBQ9Y5M8 271 aaKnown RBP13.88□□□□□ -0.19
SEC61A1-206ENST00000491668 CITO14578 2027 aa13.88□□□□□ -0.19
SEC61A1-206ENST00000491668 WDR87Q6ZQQ6 2873 aa13.88□□□□□ -0.19
SEC61A1-206ENST00000491668 PDCD11Q14690 1871 aaKnown RBP13.87□□□□□ -0.19
SEC61A1-206ENST00000491668 CUTAO60888 179 aa13.87□□□□□ -0.19
SEC61A1-206ENST00000491668 PDGFBP01127 241 aaPredicted RBP13.87□□□□□ -0.19
SEC61A1-206ENST00000491668 HARSP12081 509 aaKnown RBP13.87□□□□□ -0.19
SEC61A1-206ENST00000491668 TKTP29401 623 aaKnown RBP13.87□□□□□ -0.19
SEC61A1-206ENST00000491668 BRCC3P46736 316 aa13.87□□□□□ -0.19
SEC61A1-206ENST00000491668 SMTNP53814 917 aa13.87□□□□□ -0.19
SEC61A1-206ENST00000491668 MCL1Q07820 350 aa13.87□□□□□ -0.19
SEC61A1-206ENST00000491668 STRN3Q13033 797 aa13.87□□□□□ -0.19
SEC61A1-206ENST00000491668 NOLC1Q14978 699 aaKnown RBP eCLIP13.87□□□□□ -0.19
SEC61A1-206ENST00000491668 PSMD5Q16401 504 aa13.87□□□□□ -0.19
SEC61A1-206ENST00000491668 ZBTB41Q5SVQ8 909 aa13.87□□□□□ -0.19
SEC61A1-206ENST00000491668 SLC39A4Q6P5W5 647 aa13.87□□□□□ -0.19
SEC61A1-206ENST00000491668 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.87□□□□□ -0.19
SEC61A1-206ENST00000491668 APBB1IPQ7Z5R6 666 aaPredicted RBP13.87□□□□□ -0.19
SEC61A1-206ENST00000491668 TDRD5Q8NAT2 981 aaKnown RBP13.87□□□□□ -0.19
SEC61A1-206ENST00000491668 ACAP3Q96P50 834 aa13.87□□□□□ -0.19
SEC61A1-206ENST00000491668 GBP4Q96PP9 640 aa13.87□□□□□ -0.19
SEC61A1-206ENST00000491668 PLEKHA4Q9H4M7 779 aa13.87□□□□□ -0.19
SEC61A1-206ENST00000491668 TOPORSQ9NS56 1045 aaPredicted RBP13.87□□□□□ -0.19
SEC61A1-206ENST00000491668 FBXW11Q9UKB1 542 aa13.87□□□□□ -0.19
SEC61A1-206ENST00000491668 DOCK8Q8NF50 2099 aa13.87□□□□□ -0.19
SEC61A1-206ENST00000491668 ZMYND10O75800 440 aa13.86□□□□□ -0.19
SEC61A1-206ENST00000491668 KCNA4P22459 653 aa13.86□□□□□ -0.19
SEC61A1-206ENST00000491668 TNFSF9P41273 254 aa13.86□□□□□ -0.19
SEC61A1-206ENST00000491668 YARSP54577 528 aaKnown RBP13.86□□□□□ -0.19
SEC61A1-206ENST00000491668 ELAVL2Q12926 359 aaKnown RBP13.86□□□□□ -0.19
SEC61A1-206ENST00000491668 IER5LQ5T953 404 aa13.86□□□□□ -0.19
SEC61A1-206ENST00000491668 CCDC149Q6ZUS6 474 aa13.86□□□□□ -0.19
SEC61A1-206ENST00000491668 SMG7Q92540 1137 aaKnown RBP13.86□□□□□ -0.19
SEC61A1-206ENST00000491668 PBXIP1Q96AQ6 731 aa13.86□□□□□ -0.19
SEC61A1-206ENST00000491668 DDX27Q96GQ7 796 aaKnown RBP13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms