RNA–Protein interactions for RNA: ENST00000491421.5

LSM2-213, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM2, Length 820 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-213ENST00000491421 PLCG1P19174 1290 aa9.04□□□□□ -0.96
LSM2-213ENST00000491421 FGFR3P22607 806 aa9.04□□□□□ -0.96
LSM2-213ENST00000491421 IGFBP6P24592 240 aaPredicted RBP9.04□□□□□ -0.96
LSM2-213ENST00000491421 GBP2P32456 591 aaPredicted RBP9.04□□□□□ -0.96
LSM2-213ENST00000491421 MATR3P43243 847 aaKnown RBP eCLIP9.04□□□□□ -0.96
LSM2-213ENST00000491421 GRIN1Q05586 938 aa9.04□□□□□ -0.96
LSM2-213ENST00000491421 SOX4Q06945 474 aaPredicted RBP9.04□□□□□ -0.96
LSM2-213ENST00000491421 DHX8Q14562 1220 aaKnown RBP9.04□□□□□ -0.96
LSM2-213ENST00000491421 NOLC1Q14978 699 aaKnown RBP eCLIP9.04□□□□□ -0.961e-7■□□□□ 11
LSM2-213ENST00000491421 KARSQ15046 597 aaKnown RBP9.04□□□□□ -0.96
LSM2-213ENST00000491421 UPP1Q16831 310 aa9.04□□□□□ -0.96
LSM2-213ENST00000491421 ARSHQ5FYA8 562 aa9.04□□□□□ -0.96
LSM2-213ENST00000491421 XKR4Q5GH76 650 aa9.04□□□□□ -0.96
LSM2-213ENST00000491421 ALKAL1Q6UXT8 129 aa9.04□□□□□ -0.96
LSM2-213ENST00000491421 ZPBP2Q6X784 338 aa9.04□□□□□ -0.96
LSM2-213ENST00000491421 BICD1Q96G01 975 aa9.04□□□□□ -0.96
LSM2-213ENST00000491421 DDX27Q96GQ7 796 aaKnown RBP9.04□□□□□ -0.96
LSM2-213ENST00000491421 ZBTB45Q96K62 511 aaPredicted RBP9.04□□□□□ -0.96
LSM2-213ENST00000491421 CLSTN3Q9BQT9 956 aa9.04□□□□□ -0.96
LSM2-213ENST00000491421 REEP2Q9BRK0 252 aa9.04□□□□□ -0.96
LSM2-213ENST00000491421 PRKD2Q9BZL6 878 aa9.04□□□□□ -0.96
LSM2-213ENST00000491421 CNTN3Q9P232 1028 aa9.04□□□□□ -0.96
LSM2-213ENST00000491421 FBXW11Q9UKB1 542 aa9.04□□□□□ -0.96
LSM2-213ENST00000491421 ODF2LQ9ULJ1 636 aa9.04□□□□□ -0.96
LSM2-213ENST00000491421 TECTAO75443 2155 aa9.04□□□□□ -0.96
LSM2-213ENST00000491421 I3L4J1 428 aa9.03□□□□□ -0.96
LSM2-213ENST00000491421 K7ENM7 598 aa9.03□□□□□ -0.96
LSM2-213ENST00000491421 CLDN3O15551 220 aa9.03□□□□□ -0.96
LSM2-213ENST00000491421 ADAM12O43184 909 aa9.03□□□□□ -0.96
LSM2-213ENST00000491421 N4BP1O75113 896 aaKnown RBP9.03□□□□□ -0.96
LSM2-213ENST00000491421 TBCAO75347 108 aaKnown RBP9.03□□□□□ -0.96
LSM2-213ENST00000491421 FAM13AO94988 1023 aa9.03□□□□□ -0.96
LSM2-213ENST00000491421 PAPLNO95428 1278 aa9.03□□□□□ -0.96
LSM2-213ENST00000491421 PDGFBP01127 241 aaPredicted RBP9.03□□□□□ -0.96
LSM2-213ENST00000491421 KRT18P05783 430 aaKnown RBP9.03□□□□□ -0.96
LSM2-213ENST00000491421 HNRNPA1P09651 372 aaKnown RBP eCLIP9.03□□□□□ -0.96
LSM2-213ENST00000491421 TKTP29401 623 aaKnown RBP9.03□□□□□ -0.96
LSM2-213ENST00000491421 OR1D2P34982 312 aa9.03□□□□□ -0.96
LSM2-213ENST00000491421 BRCC3P46736 316 aa9.03□□□□□ -0.96
LSM2-213ENST00000491421 VCPP55072 806 aaKnown RBP9.03□□□□□ -0.96
LSM2-213ENST00000491421 NCKAP1LP55160 1127 aa9.03□□□□□ -0.96
LSM2-213ENST00000491421 NHLH1Q02575 133 aa9.03□□□□□ -0.96
LSM2-213ENST00000491421 MCL1Q07820 350 aa9.03□□□□□ -0.96
LSM2-213ENST00000491421 TDGQ13569 410 aa9.03□□□□□ -0.96
LSM2-213ENST00000491421 MCM6Q14566 821 aa9.03□□□□□ -0.96
LSM2-213ENST00000491421 SEZ6Q53EL9 994 aa9.03□□□□□ -0.96
LSM2-213ENST00000491421 PPM1LQ5SGD2 360 aa9.03□□□□□ -0.96
LSM2-213ENST00000491421 IER5LQ5T953 404 aa9.03□□□□□ -0.96
LSM2-213ENST00000491421 CD300LGQ6UXG3 332 aa9.03□□□□□ -0.96
LSM2-213ENST00000491421 ANKS3Q6ZW76 656 aa9.03□□□□□ -0.96
LSM2-213ENST00000491421 HAUS6Q7Z4H7 955 aa9.03□□□□□ -0.96
LSM2-213ENST00000491421 MYCT1Q8N699 235 aa9.03□□□□□ -0.96
LSM2-213ENST00000491421 C3orf58Q8NDZ4 430 aa9.03□□□□□ -0.96
LSM2-213ENST00000491421 RAD54LQ92698 747 aa9.03□□□□□ -0.96
LSM2-213ENST00000491421 C18orf25Q96B23 403 aaPredicted RBP9.03□□□□□ -0.96
LSM2-213ENST00000491421 ZMAT2Q96NC0 199 aaKnown RBP9.03□□□□□ -0.96
LSM2-213ENST00000491421 PRRX2Q99811 253 aa9.03□□□□□ -0.96
LSM2-213ENST00000491421 KCNK12Q9HB15 430 aa9.03□□□□□ -0.96
LSM2-213ENST00000491421 PARVGQ9HBI0 331 aa9.03□□□□□ -0.96
LSM2-213ENST00000491421 IGSF9Q9P2J2 1179 aa9.03□□□□□ -0.96
LSM2-213ENST00000491421 EPS15L1Q9UBC2 864 aa9.03□□□□□ -0.96
LSM2-213ENST00000491421 MTRRQ9UBK8 725 aa9.03□□□□□ -0.96
LSM2-213ENST00000491421 NUB1Q9Y5A7 615 aa9.03□□□□□ -0.96
LSM2-213ENST00000491421 CLIC4Q9Y696 253 aa9.03□□□□□ -0.96
LSM2-213ENST00000491421 HNRNPDLO14979 420 aaKnown RBP9.02□□□□□ -0.97
LSM2-213ENST00000491421 MEFVO15553 781 aaPredicted RBP9.02□□□□□ -0.97
LSM2-213ENST00000491421 XYLBO75191 536 aa9.02□□□□□ -0.97
LSM2-213ENST00000491421 C8AP07357 584 aa9.02□□□□□ -0.97
LSM2-213ENST00000491421 CLTAP09496 248 aa9.02□□□□□ -0.97
LSM2-213ENST00000491421 CXCL8P10145 99 aa9.02□□□□□ -0.97
LSM2-213ENST00000491421 SYT1P21579 422 aa9.02□□□□□ -0.97
LSM2-213ENST00000491421 SCP2P22307 547 aa9.02□□□□□ -0.97
LSM2-213ENST00000491421 MARCKSP29966 332 aaPredicted RBP9.02□□□□□ -0.97
LSM2-213ENST00000491421 AVPR2P30518 371 aa9.02□□□□□ -0.97
LSM2-213ENST00000491421 HOXA9P31269 272 aa9.02□□□□□ -0.97
LSM2-213ENST00000491421 RPL9P32969 192 aaKnown RBP9.02□□□□□ -0.97
LSM2-213ENST00000491421 LIG4P49917 911 aa9.02□□□□□ -0.97
LSM2-213ENST00000491421 ZNF131P52739 623 aa9.02□□□□□ -0.97
LSM2-213ENST00000491421 PTPN5P54829 565 aa9.02□□□□□ -0.97
LSM2-213ENST00000491421 RESTQ13127 1097 aa9.02□□□□□ -0.97
LSM2-213ENST00000491421 RAB33AQ14088 237 aa9.02□□□□□ -0.97
LSM2-213ENST00000491421 SLC10A6Q3KNW5 377 aa9.02□□□□□ -0.97
LSM2-213ENST00000491421 GET4Q7L5D6 327 aaPredicted RBP9.02□□□□□ -0.97
LSM2-213ENST00000491421 GRASPQ7Z6J2 395 aaPredicted RBP9.02□□□□□ -0.97
LSM2-213ENST00000491421 PRSS33Q8NF86 280 aa9.02□□□□□ -0.97
LSM2-213ENST00000491421 SLC7A14Q8TBB6 771 aa9.02□□□□□ -0.97
LSM2-213ENST00000491421 LRRC15Q8TF66 581 aa9.02□□□□□ -0.97
LSM2-213ENST00000491421 RSAD2Q8WXG1 361 aa9.02□□□□□ -0.97
LSM2-213ENST00000491421 LARP4BQ92615 738 aaKnown RBP9.02□□□□□ -0.97
LSM2-213ENST00000491421 MYADMQ96S97 322 aa9.02□□□□□ -0.97
LSM2-213ENST00000491421 BACH2Q9BYV9 841 aa9.02□□□□□ -0.97
LSM2-213ENST00000491421 MFSD1Q9H3U5 465 aa9.02□□□□□ -0.97
LSM2-213ENST00000491421 ZHX3Q9H4I2 956 aa9.02□□□□□ -0.97
LSM2-213ENST00000491421 BLOC1S4Q9NUP1 217 aa9.02□□□□□ -0.97
LSM2-213ENST00000491421 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP9.02□□□□□ -0.97
LSM2-213ENST00000491421 TBX20Q9UMR3 447 aa9.02□□□□□ -0.97
LSM2-213ENST00000491421 POLIQ9UNA4 740 aa9.02□□□□□ -0.97
LSM2-213ENST00000491421 BACE2Q9Y5Z0 518 aa9.02□□□□□ -0.97
LSM2-213ENST00000491421 CDY1Q9Y6F8 540 aa9.02□□□□□ -0.97
LSM2-213ENST00000491421 TDRD15B5MCY1 1934 aaKnown RBP9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms