RNA–Protein interactions for RNA: ENST00000490969.5

SNAPC3-206, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

TSL 1 (best)

Gene SNAPC3, Length 2,524 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-206ENST00000490969 KLC1Q07866 573 aa20.63■□□□□ 0.89
SNAPC3-206ENST00000490969 COG2Q14746 738 aa20.63■□□□□ 0.89
SNAPC3-206ENST00000490969 ZNF746Q6NUN9 644 aaPredicted RBP20.63■□□□□ 0.89
SNAPC3-206ENST00000490969 C1orf54Q8WWF1 131 aa20.63■□□□□ 0.89
SNAPC3-206ENST00000490969 DNAJC9Q8WXX5 260 aa20.63■□□□□ 0.89
SNAPC3-206ENST00000490969 MRIQ9BWK5 157 aa20.63■□□□□ 0.89
SNAPC3-206ENST00000490969 NINJ2Q9NZG7 142 aa20.63■□□□□ 0.89
SNAPC3-206ENST00000490969 ASB3Q9Y575 518 aa20.63■□□□□ 0.89
SNAPC3-206ENST00000490969 CLRN2A0PK11 232 aa20.62■□□□□ 0.89
SNAPC3-206ENST00000490969 H0Y3Z8 333 aa20.62■□□□□ 0.89
SNAPC3-206ENST00000490969 MAPK13O15264 365 aa20.62■□□□□ 0.89
SNAPC3-206ENST00000490969 EIF3DO15371 548 aaKnown RBP eCLIP20.62■□□□□ 0.89
SNAPC3-206ENST00000490969 CDH16O75309 829 aa20.62■□□□□ 0.89
SNAPC3-206ENST00000490969 CHRNB2P17787 502 aa20.62■□□□□ 0.89
SNAPC3-206ENST00000490969 NFIL3Q16649 462 aa20.62■□□□□ 0.89
SNAPC3-206ENST00000490969 NBPF20Q3BBV1 942 aa20.62■□□□□ 0.89
SNAPC3-206ENST00000490969 PRR16Q569H4 304 aa20.62■□□□□ 0.89
SNAPC3-206ENST00000490969 WASHC2DQ5SRD0 308 aa20.62■□□□□ 0.89
SNAPC3-206ENST00000490969 RSBN1LQ6PCB5 846 aaPredicted RBP20.62■□□□□ 0.89
SNAPC3-206ENST00000490969 SLC7A6OSQ96CW6 309 aaPredicted RBP20.62■□□□□ 0.89
SNAPC3-206ENST00000490969 SNF8Q96H20 258 aa20.62■□□□□ 0.89
SNAPC3-206ENST00000490969 ACTL7BQ9Y614 415 aa20.62■□□□□ 0.89
SNAPC3-206ENST00000490969 ATMINO43313 823 aaPredicted RBP20.62■□□□□ 0.89
SNAPC3-206ENST00000490969 EPHB2P29323 1055 aa20.62■□□□□ 0.89
SNAPC3-206ENST00000490969 NMT1P30419 496 aaKnown RBP20.62■□□□□ 0.89
SNAPC3-206ENST00000490969 WDR4P57081 412 aaKnown RBP20.62■□□□□ 0.89
SNAPC3-206ENST00000490969 TGFB2P61812 414 aa20.62■□□□□ 0.89
SNAPC3-206ENST00000490969 CYP4A11Q02928 519 aa20.62■□□□□ 0.89
SNAPC3-206ENST00000490969 LLGL1Q15334 1064 aa20.62■□□□□ 0.89
SNAPC3-206ENST00000490969 ZC2HC1CQ53FD0 456 aaPredicted RBP20.62■□□□□ 0.89
SNAPC3-206ENST00000490969 TTC8Q8TAM2 541 aa20.62■□□□□ 0.89
SNAPC3-206ENST00000490969 PAIP2Q9BPZ3 127 aaKnown RBP20.62■□□□□ 0.89
SNAPC3-206ENST00000490969 PSME4Q14997 1843 aa20.62■□□□□ 0.89
SNAPC3-206ENST00000490969 BRCA1P38398 1863 aaKnown RBP20.61■□□□□ 0.89
SNAPC3-206ENST00000490969 NFKBIEO00221 500 aa20.61■□□□□ 0.89
SNAPC3-206ENST00000490969 MTA2O94776 668 aa20.61■□□□□ 0.89
SNAPC3-206ENST00000490969 VIL1P09327 827 aaKnown RBP20.61■□□□□ 0.89
SNAPC3-206ENST00000490969 MYBL1P10243 752 aa20.61■□□□□ 0.89
SNAPC3-206ENST00000490969 GAP43P17677 238 aa20.61■□□□□ 0.89
SNAPC3-206ENST00000490969 POLD1P28340 1107 aa20.61■□□□□ 0.89
SNAPC3-206ENST00000490969 ITGA8P53708 1063 aa20.61■□□□□ 0.89
SNAPC3-206ENST00000490969 SNX1Q13596 522 aa20.61■□□□□ 0.89
SNAPC3-206ENST00000490969 SGO2Q562F6 1265 aa20.61■□□□□ 0.89
SNAPC3-206ENST00000490969 DALRD3Q5D0E6 543 aaKnown RBP20.61■□□□□ 0.89
SNAPC3-206ENST00000490969 TMEM154Q6P9G4 183 aa20.61■□□□□ 0.89
SNAPC3-206ENST00000490969 CDAN1Q8IWY9 1227 aa20.61■□□□□ 0.89
SNAPC3-206ENST00000490969 RPUSD2Q8IZ73 545 aaKnown RBP20.61■□□□□ 0.89
SNAPC3-206ENST00000490969 UPF1Q92900 1129 aaKnown RBP eCLIP20.61■□□□□ 0.89
SNAPC3-206ENST00000490969 FAM47DPA6NHR8 397 aa20.61■□□□□ 0.89
SNAPC3-206ENST00000490969 CLDN3O15551 220 aa20.61■□□□□ 0.89
SNAPC3-206ENST00000490969 T-ENOLP0DO92 83 aa20.61■□□□□ 0.89
SNAPC3-206ENST00000490969 IVDP26440 423 aa20.61■□□□□ 0.89
SNAPC3-206ENST00000490969 CNGA1P29973 690 aa20.61■□□□□ 0.89
SNAPC3-206ENST00000490969 CYP2J2P51589 502 aa20.61■□□□□ 0.89
SNAPC3-206ENST00000490969 PRELPP51888 382 aa20.61■□□□□ 0.89
SNAPC3-206ENST00000490969 JAG1P78504 1218 aa20.61■□□□□ 0.89
SNAPC3-206ENST00000490969 MOGSQ13724 837 aa20.61■□□□□ 0.89
SNAPC3-206ENST00000490969 TMEM63BQ5T3F8 832 aa20.61■□□□□ 0.89
SNAPC3-206ENST00000490969 ZNF449Q6P9G9 518 aa20.61■□□□□ 0.89
SNAPC3-206ENST00000490969 BTBD6Q96KE9 485 aa20.61■□□□□ 0.89
SNAPC3-206ENST00000490969 IDI2Q9BXS1 227 aa20.61■□□□□ 0.89
SNAPC3-206ENST00000490969 PHTF1Q9UMS5 762 aa20.61■□□□□ 0.89
SNAPC3-206ENST00000490969 FRMD4BQ9Y2L6 1034 aa20.61■□□□□ 0.89
SNAPC3-206ENST00000490969 IGKV6D-41A0A0C4DH26 115 aa20.6■□□□□ 0.89
SNAPC3-206ENST00000490969 TULP1O00294 542 aaPredicted RBP20.6■□□□□ 0.89
SNAPC3-206ENST00000490969 MAGEB2O15479 319 aa20.6■□□□□ 0.89
SNAPC3-206ENST00000490969 DCTN3O75935 186 aa20.6■□□□□ 0.89
SNAPC3-206ENST00000490969 BCRP11274 1271 aa20.6■□□□□ 0.89
SNAPC3-206ENST00000490969 RFX1P22670 979 aa20.6■□□□□ 0.89
SNAPC3-206ENST00000490969 PTGER2P43116 358 aa20.6■□□□□ 0.89
SNAPC3-206ENST00000490969 CXCL9Q07325 125 aa20.6■□□□□ 0.89
SNAPC3-206ENST00000490969 DNAJC3Q13217 504 aa20.6■□□□□ 0.89
SNAPC3-206ENST00000490969 MOXD1Q6UVY6 613 aa20.6■□□□□ 0.89
SNAPC3-206ENST00000490969 KSR1Q8IVT5 923 aa20.6■□□□□ 0.89
SNAPC3-206ENST00000490969 ANKRD35Q8N283 1001 aa20.6■□□□□ 0.89
SNAPC3-206ENST00000490969 GALNT15Q8N3T1 639 aa20.6■□□□□ 0.89
SNAPC3-206ENST00000490969 SH3TC2Q8TF17 1288 aa20.6■□□□□ 0.89
SNAPC3-206ENST00000490969 DENND2DQ9H6A0 471 aaPredicted RBP20.6■□□□□ 0.89
SNAPC3-206ENST00000490969 PIDD1Q9HB75 910 aa20.6■□□□□ 0.89
SNAPC3-206ENST00000490969 RABGAP1Q9Y3P9 1069 aa20.6■□□□□ 0.89
SNAPC3-206ENST00000490969 ENTPD5O75356 428 aa20.6■□□□□ 0.89
SNAPC3-206ENST00000490969 RPS6KA3P51812 740 aa20.6■□□□□ 0.89
SNAPC3-206ENST00000490969 NLGN2Q8NFZ4 835 aa20.6■□□□□ 0.89
SNAPC3-206ENST00000490969 USP20Q9Y2K6 914 aa20.6■□□□□ 0.89
SNAPC3-206ENST00000490969 RASA4BC9J798 803 aa20.59■□□□□ 0.89
SNAPC3-206ENST00000490969 RASA4O43374 803 aa20.59■□□□□ 0.89
SNAPC3-206ENST00000490969 FAM13AO94988 1023 aa20.59■□□□□ 0.89
SNAPC3-206ENST00000490969 SP100P23497 879 aaPredicted RBP20.59■□□□□ 0.89
SNAPC3-206ENST00000490969 ALDH3A1P30838 453 aa20.59■□□□□ 0.89
SNAPC3-206ENST00000490969 GCLCP48506 637 aaPredicted RBP20.59■□□□□ 0.89
SNAPC3-206ENST00000490969 RASSF2P50749 326 aa20.59■□□□□ 0.89
SNAPC3-206ENST00000490969 TRAF1Q13077 416 aa20.59■□□□□ 0.89
SNAPC3-206ENST00000490969 TRIP13Q15645 432 aaPredicted RBP20.59■□□□□ 0.89
SNAPC3-206ENST00000490969 APBB1IPQ7Z5R6 666 aaPredicted RBP20.59■□□□□ 0.89
SNAPC3-206ENST00000490969 MYCT1Q8N699 235 aa20.59■□□□□ 0.89
SNAPC3-206ENST00000490969 RBBP8NLQ8NC74 664 aaPredicted RBP20.59■□□□□ 0.89
SNAPC3-206ENST00000490969 LMO3Q8TAP4 145 aa20.59■□□□□ 0.89
SNAPC3-206ENST00000490969 ZNF564Q8TBZ8 553 aaPredicted RBP20.59■□□□□ 0.89
SNAPC3-206ENST00000490969 SPOCK2Q92563 424 aa20.59■□□□□ 0.89
SNAPC3-206ENST00000490969 PWWP2AQ96N64 755 aa20.59■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms