RNA–Protein interactions for RNA: ENST00000490035.6

LSAMP-205, Transcript of limbic system associated membrane protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSAMP, Length 9,446 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-205ENST00000490035 LRRIQ1Q96JM4 1722 aa9.31□□□□□ -0.92
LSAMP-205ENST00000490035 LMTK2Q8IWU2 1503 aa9.31□□□□□ -0.92
LSAMP-205ENST00000490035 FAM47DPA6NHR8 397 aa9.31□□□□□ -0.92
LSAMP-205ENST00000490035 TOMM70O94826 608 aa9.31□□□□□ -0.92
LSAMP-205ENST00000490035 HOXA13P31271 388 aaPredicted RBP9.31□□□□□ -0.92
LSAMP-205ENST00000490035 S100A5P33763 92 aa9.31□□□□□ -0.92
LSAMP-205ENST00000490035 DEFA1P59665 94 aa9.31□□□□□ -0.92
LSAMP-205ENST00000490035 DEFA3P59666 94 aa9.31□□□□□ -0.92
LSAMP-205ENST00000490035 CENPPQ6IPU0 288 aa9.31□□□□□ -0.92
LSAMP-205ENST00000490035 ETNK1Q9HBU6 452 aa9.31□□□□□ -0.92
LSAMP-205ENST00000490035 CNTFP26441 200 aa9.31□□□□□ -0.92
LSAMP-205ENST00000490035 EIF3EP60228 445 aaKnown RBP9.31□□□□□ -0.92
LSAMP-205ENST00000490035 KLC1Q07866 573 aa9.31□□□□□ -0.92
LSAMP-205ENST00000490035 GTF2H3Q13889 308 aa9.31□□□□□ -0.92
LSAMP-205ENST00000490035 TTC39BQ5VTQ0 682 aaPredicted RBP9.31□□□□□ -0.92
LSAMP-205ENST00000490035 ISCA1Q9BUE6 129 aa9.31□□□□□ -0.92
LSAMP-205ENST00000490035 POLR3FQ9H1D9 316 aaPredicted RBP9.31□□□□□ -0.92
LSAMP-205ENST00000490035 IGSF9BQ9UPX0 1349 aa9.31□□□□□ -0.92
LSAMP-205ENST00000490035 ZNF263O14978 683 aa9.31□□□□□ -0.92
LSAMP-205ENST00000490035 MEFVO15553 781 aaPredicted RBP9.31□□□□□ -0.92
LSAMP-205ENST00000490035 PTK6Q13882 451 aa9.31□□□□□ -0.92
LSAMP-205ENST00000490035 NAB2Q15742 525 aa9.31□□□□□ -0.92
LSAMP-205ENST00000490035 SUSD4Q5VX71 490 aa9.31□□□□□ -0.92
LSAMP-205ENST00000490035 BTBD8Q5XKL5 378 aa9.31□□□□□ -0.92
LSAMP-205ENST00000490035 GPIHBP1Q8IV16 184 aa9.31□□□□□ -0.92
LSAMP-205ENST00000490035 SPATA16Q9BXB7 569 aa9.31□□□□□ -0.92
LSAMP-205ENST00000490035 BAZ2BQ9UIF8 2168 aaKnown RBP9.31□□□□□ -0.92
LSAMP-205ENST00000490035 F5H6K3 240 aa9.31□□□□□ -0.92
LSAMP-205ENST00000490035 ATP1A3P13637 1013 aa9.31□□□□□ -0.92
LSAMP-205ENST00000490035 SPRP35270 261 aaPredicted RBP9.31□□□□□ -0.92
LSAMP-205ENST00000490035 KLRC3Q07444 240 aa9.31□□□□□ -0.92
LSAMP-205ENST00000490035 CCDC144BQ3MJ40 725 aa9.31□□□□□ -0.92
LSAMP-205ENST00000490035 SNRNP48Q6IEG0 339 aaKnown RBP9.31□□□□□ -0.92
LSAMP-205ENST00000490035 SPATA21Q7Z572 469 aa9.31□□□□□ -0.92
LSAMP-205ENST00000490035 SCFD2Q8WU76 684 aa9.31□□□□□ -0.92
LSAMP-205ENST00000490035 HNRNPLLQ8WVV9 542 aaKnown RBP9.31□□□□□ -0.92
LSAMP-205ENST00000490035 SH3GL3Q99963 347 aa9.31□□□□□ -0.92
LSAMP-205ENST00000490035 LSM7Q9UK45 103 aaKnown RBP9.31□□□□□ -0.92
LSAMP-205ENST00000490035 GRID1Q9ULK0 1009 aa9.31□□□□□ -0.92
LSAMP-205ENST00000490035 TTC26A0AVF1 554 aa9.31□□□□□ -0.92
LSAMP-205ENST00000490035 GTF2H1P32780 548 aa9.31□□□□□ -0.92
LSAMP-205ENST00000490035 MDH1P40925 334 aaKnown RBP9.31□□□□□ -0.92
LSAMP-205ENST00000490035 RANBP1P43487 201 aa9.31□□□□□ -0.92
LSAMP-205ENST00000490035 CDH6P55285 790 aa9.31□□□□□ -0.92
LSAMP-205ENST00000490035 TPI1P60174 286 aa9.31□□□□□ -0.92
LSAMP-205ENST00000490035 PDK1Q15118 436 aa9.31□□□□□ -0.92
LSAMP-205ENST00000490035 TRIP13Q15645 432 aaPredicted RBP9.31□□□□□ -0.92
LSAMP-205ENST00000490035 RABL6Q3YEC7 729 aaPredicted RBP9.31□□□□□ -0.92
LSAMP-205ENST00000490035 RGS9BPQ6ZS82 235 aa9.31□□□□□ -0.92
LSAMP-205ENST00000490035 SIRT2Q8IXJ6 389 aa9.31□□□□□ -0.92
LSAMP-205ENST00000490035 CCDC24Q8N4L8 307 aa9.31□□□□□ -0.92
LSAMP-205ENST00000490035 MTIF3Q9H2K0 278 aaKnown RBP9.31□□□□□ -0.92
LSAMP-205ENST00000490035 EPS8L2Q9H6S3 715 aa9.31□□□□□ -0.92
LSAMP-205ENST00000490035 KRCC1Q9NPI7 259 aaPredicted RBP9.31□□□□□ -0.92
LSAMP-205ENST00000490035 KCNH4Q9UQ05 1017 aa9.31□□□□□ -0.92
LSAMP-205ENST00000490035 USP15Q9Y4E8 981 aaPredicted RBP9.31□□□□□ -0.92
LSAMP-205ENST00000490035 EMSYQ7Z589 1322 aa9.3□□□□□ -0.92
LSAMP-205ENST00000490035 IQCA1LA6NCM1 817 aa9.3□□□□□ -0.92
LSAMP-205ENST00000490035 DNAJC6O75061 913 aa9.3□□□□□ -0.92
LSAMP-205ENST00000490035 ATP5BP06576 529 aaKnown RBP9.3□□□□□ -0.92
LSAMP-205ENST00000490035 HIST1H2AGP0C0S8 130 aaPredicted RBP9.3□□□□□ -0.92
LSAMP-205ENST00000490035 HIST1H2ADP20671 130 aa9.3□□□□□ -0.92
LSAMP-205ENST00000490035 ZBED8Q8IZ13 594 aa9.3□□□□□ -0.92
LSAMP-205ENST00000490035 HIST1H2AHQ96KK5 128 aa9.3□□□□□ -0.92
LSAMP-205ENST00000490035 HIST1H2AJQ99878 128 aa9.3□□□□□ -0.92
LSAMP-205ENST00000490035 H2AFJQ9BTM1 129 aa9.3□□□□□ -0.92
LSAMP-205ENST00000490035 PCDHB2Q9Y5E7 798 aa9.3□□□□□ -0.92
LSAMP-205ENST00000490035 PPP1R37O75864 691 aa9.3□□□□□ -0.92
LSAMP-205ENST00000490035 OCM2P0CE71 109 aa9.3□□□□□ -0.92
LSAMP-205ENST00000490035 OCMP0CE72 109 aaPredicted RBP9.3□□□□□ -0.92
LSAMP-205ENST00000490035 SLC2A3P11169 496 aa9.3□□□□□ -0.92
LSAMP-205ENST00000490035 NCKAP1LP55160 1127 aa9.3□□□□□ -0.92
LSAMP-205ENST00000490035 HNRNPH2P55795 449 aaKnown RBP9.3□□□□□ -0.92
LSAMP-205ENST00000490035 EGFL8Q99944 293 aa9.3□□□□□ -0.92
LSAMP-205ENST00000490035 M0R3G1 203 aa9.3□□□□□ -0.92
LSAMP-205ENST00000490035 NEMP1O14524 444 aa9.3□□□□□ -0.92
LSAMP-205ENST00000490035 DPYSL4O14531 572 aa9.3□□□□□ -0.92
LSAMP-205ENST00000490035 PCSK1P29120 753 aa9.3□□□□□ -0.92
LSAMP-205ENST00000490035 KRT17Q04695 432 aa9.3□□□□□ -0.92
LSAMP-205ENST00000490035 STRIP1Q5VSL9 837 aa9.3□□□□□ -0.92
LSAMP-205ENST00000490035 HAUS6Q7Z4H7 955 aa9.3□□□□□ -0.92
LSAMP-205ENST00000490035 PHF21AQ96BD5 680 aa9.3□□□□□ -0.92
LSAMP-205ENST00000490035 CRAMP1Q96RY5 1269 aa9.3□□□□□ -0.92
LSAMP-205ENST00000490035 RUBCNLQ9H714 662 aa9.3□□□□□ -0.92
LSAMP-205ENST00000490035 RNF146Q9NTX7 359 aa9.3□□□□□ -0.92
LSAMP-205ENST00000490035 MAD2L2Q9UI95 211 aa9.3□□□□□ -0.92
LSAMP-205ENST00000490035 POLBP06746 335 aa9.3□□□□□ -0.92
LSAMP-205ENST00000490035 GARTP22102 1010 aa9.3□□□□□ -0.92
LSAMP-205ENST00000490035 HADHAP40939 763 aa9.3□□□□□ -0.92
LSAMP-205ENST00000490035 PDCLQ13371 301 aa9.3□□□□□ -0.92
LSAMP-205ENST00000490035 RHPN2Q8IUC4 686 aa9.3□□□□□ -0.92
LSAMP-205ENST00000490035 CD302Q8IX05 232 aa9.3□□□□□ -0.92
LSAMP-205ENST00000490035 TEKT4Q8WW24 435 aa9.3□□□□□ -0.92
LSAMP-205ENST00000490035 TMEM8AQ9HCN3 771 aa9.3□□□□□ -0.92
LSAMP-205ENST00000490035 IL1RAPL1Q9NZN1 696 aa9.3□□□□□ -0.92
LSAMP-205ENST00000490035 KIAA1257Q9ULG3 409 aa9.3□□□□□ -0.92
LSAMP-205ENST00000490035 CASZ1Q86V15 1759 aa9.3□□□□□ -0.92
LSAMP-205ENST00000490035 HMOX2P30519 316 aa9.3□□□□□ -0.92
LSAMP-205ENST00000490035 ZNF200P98182 395 aaPredicted RBP9.3□□□□□ -0.92
LSAMP-205ENST00000490035 KPNB1Q14974 876 aaKnown RBP9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms