RNA–Protein interactions for RNA: ENST00000489417.5

SND1-214, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 2

Gene SND1, Length 1,447 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-214ENST00000489417 RBAK-RBAKDNI3L0D1 243 aa22.55■■□□□ 1.2
SND1-214ENST00000489417 PHACTR2O75167 634 aa22.55■■□□□ 1.2
SND1-214ENST00000489417 LRRN2O75325 713 aa22.55■■□□□ 1.2
SND1-214ENST00000489417 VNN1O95497 513 aa22.55■■□□□ 1.2
SND1-214ENST00000489417 TNNC2P02585 160 aa22.55■■□□□ 1.2
SND1-214ENST00000489417 NFICP08651 508 aa22.55■■□□□ 1.2
SND1-214ENST00000489417 RFX1P22670 979 aa22.55■■□□□ 1.2
SND1-214ENST00000489417 JADE1Q6IE81 842 aa22.55■■□□□ 1.2
SND1-214ENST00000489417 LRRC8DQ7L1W4 858 aa22.55■■□□□ 1.2
SND1-214ENST00000489417 ZSCAN30Q86W11 494 aa22.55■■□□□ 1.2
SND1-214ENST00000489417 SNX27Q96L92 541 aa22.55■■□□□ 1.2
SND1-214ENST00000489417 ZNHIT6Q9NWK9 470 aaKnown RBP22.55■■□□□ 1.2
SND1-214ENST00000489417 EIF2AK3Q9NZJ5 1116 aaKnown RBP22.55■■□□□ 1.2
SND1-214ENST00000489417 DNAJC12Q9UKB3 198 aa22.55■■□□□ 1.2
SND1-214ENST00000489417 AJAP1Q9UKB5 411 aaPredicted RBP22.55■■□□□ 1.2
SND1-214ENST00000489417 PYCARDQ9ULZ3 195 aa22.55■■□□□ 1.2
SND1-214ENST00000489417 HES2Q9Y543 173 aa22.55■■□□□ 1.2
SND1-214ENST00000489417 IPPQ9Y573 584 aa22.55■■□□□ 1.2
SND1-214ENST00000489417 ANK1P16157 1881 aa22.54■■□□□ 1.2
SND1-214ENST00000489417 ZC3H11AO75152 810 aaKnown RBP eCLIP22.54■■□□□ 1.22e-6■■■□□ 15
SND1-214ENST00000489417 RECQL4O94761 1208 aa22.54■■□□□ 1.2
SND1-214ENST00000489417 ZSCAN20P17040 1043 aaPredicted RBP22.54■■□□□ 1.2
SND1-214ENST00000489417 HNRNPH3P31942 346 aaKnown RBP22.54■■□□□ 1.2
SND1-214ENST00000489417 DSC3Q14574 896 aa22.54■■□□□ 1.2
SND1-214ENST00000489417 C1orf53Q5VUE5 145 aa22.54■■□□□ 1.2
SND1-214ENST00000489417 PHLDB3Q6NSJ2 640 aa22.54■■□□□ 1.2
SND1-214ENST00000489417 TRAPPC11Q7Z392 1133 aa22.54■■□□□ 1.2
SND1-214ENST00000489417 ARHGEF19Q8IW93 802 aa22.54■■□□□ 1.2
SND1-214ENST00000489417 SMG8Q8ND04 991 aaKnown RBP22.54■■□□□ 1.2
SND1-214ENST00000489417 NT5C1BQ96P26 610 aa22.54■■□□□ 1.2
SND1-214ENST00000489417 SPAG5Q96R06 1193 aa22.54■■□□□ 1.2
SND1-214ENST00000489417 TMEM106CQ9BVX2 250 aa22.54■■□□□ 1.2
SND1-214ENST00000489417 APOL6Q9BWW8 343 aa22.54■■□□□ 1.2
SND1-214ENST00000489417 PRDM10Q9NQV6 1147 aa22.54■■□□□ 1.2
SND1-214ENST00000489417 MYO6Q9UM54 1294 aa22.54■■□□□ 1.2
SND1-214ENST00000489417 RALGAPA2Q2PPJ7 1873 aa22.53■■□□□ 1.2
SND1-214ENST00000489417 DCDC2CA8MYV0 355 aa22.53■■□□□ 1.2
SND1-214ENST00000489417 CAPN2P17655 700 aa22.53■■□□□ 1.2
SND1-214ENST00000489417 RAPGEF1Q13905 1077 aa22.53■■□□□ 1.2
SND1-214ENST00000489417 MBTPS1Q14703 1052 aa22.53■■□□□ 1.2
SND1-214ENST00000489417 TMEM132DQ14C87 1099 aa22.53■■□□□ 1.2
SND1-214ENST00000489417 MEA1Q16626 185 aa22.53■■□□□ 1.2
SND1-214ENST00000489417 TRIM60Q495X7 471 aa22.53■■□□□ 1.2
SND1-214ENST00000489417 NT5DC4Q86YG4 428 aa22.53■■□□□ 1.2
SND1-214ENST00000489417 SYN2Q92777 582 aaPredicted RBP22.53■■□□□ 1.2
SND1-214ENST00000489417 TOX2Q96NM4 488 aa22.53■■□□□ 1.2
SND1-214ENST00000489417 C11orf49Q9H6J7 331 aa22.53■■□□□ 1.2
SND1-214ENST00000489417 FAM105AQ9NUU6 356 aa22.53■■□□□ 1.2
SND1-214ENST00000489417 PLAGL2Q9UPG8 496 aa22.53■■□□□ 1.2
SND1-214ENST00000489417 DERAQ9Y315 318 aa22.53■■□□□ 1.2
SND1-214ENST00000489417 C2CD2Q9Y426 696 aa22.53■■□□□ 1.2
SND1-214ENST00000489417 PCDHB2Q9Y5E7 798 aa22.53■■□□□ 1.2
SND1-214ENST00000489417 PITPNM1O00562 1244 aa22.52■■□□□ 1.2
SND1-214ENST00000489417 AKAP5P24588 427 aa22.52■■□□□ 1.2
SND1-214ENST00000489417 JAM2P57087 298 aa22.52■■□□□ 1.2
SND1-214ENST00000489417 NCOA4Q13772 614 aa22.52■■□□□ 1.2
SND1-214ENST00000489417 WDR44Q5JSH3 913 aa22.52■■□□□ 1.2
SND1-214ENST00000489417 SFMBT2Q5VUG0 894 aa22.52■■□□□ 1.2
SND1-214ENST00000489417 WDR59Q6PJI9 974 aa22.52■■□□□ 1.2
SND1-214ENST00000489417 CYP26C1Q6V0L0 522 aa22.52■■□□□ 1.2
SND1-214ENST00000489417 TMTC1Q8IUR5 882 aa22.52■■□□□ 1.2
SND1-214ENST00000489417 HACE1Q8IYU2 909 aa22.52■■□□□ 1.2
SND1-214ENST00000489417 STK33Q9BYT3 514 aa22.52■■□□□ 1.2
SND1-214ENST00000489417 UBE2TQ9NPD8 197 aaPredicted RBP22.52■■□□□ 1.2
SND1-214ENST00000489417 UTP3Q9NQZ2 479 aaKnown RBP eCLIP22.52■■□□□ 1.21e-6■■■■■ 82.4
SND1-214ENST00000489417 PARP2Q9UGN5 583 aa22.52■■□□□ 1.2
SND1-214ENST00000489417 ARHGAP6O43182 974 aa22.51■■□□□ 1.19
SND1-214ENST00000489417 MGEA5O60502 916 aa22.51■■□□□ 1.19
SND1-214ENST00000489417 TLE2Q04725 743 aa22.51■■□□□ 1.19
SND1-214ENST00000489417 E4F1Q66K89 784 aaPredicted RBP22.51■■□□□ 1.19
SND1-214ENST00000489417 KIF12Q96FN5 646 aa22.51■■□□□ 1.19
SND1-214ENST00000489417 PI4K2AQ9BTU6 479 aa22.51■■□□□ 1.19
SND1-214ENST00000489417 RNF39Q9H2S5 420 aa22.51■■□□□ 1.19
SND1-214ENST00000489417 C1orf112Q9NSG2 853 aa22.51■■□□□ 1.19
SND1-214ENST00000489417 CNTN3Q9P232 1028 aa22.51■■□□□ 1.19
SND1-214ENST00000489417 RAB27AP51159 221 aa22.5■■□□□ 1.19
SND1-214ENST00000489417 CDK17Q00537 523 aa22.5■■□□□ 1.19
SND1-214ENST00000489417 TRPC3Q13507 836 aa22.5■■□□□ 1.19
SND1-214ENST00000489417 DRAP1Q14919 205 aaPredicted RBP22.5■■□□□ 1.19
SND1-214ENST00000489417 ALKAL1Q6UXT8 129 aa22.5■■□□□ 1.19
SND1-214ENST00000489417 PPM1KQ8N3J5 372 aa22.5■■□□□ 1.19
SND1-214ENST00000489417 HELQQ8TDG4 1101 aa22.5■■□□□ 1.19
SND1-214ENST00000489417 PAWRQ96IZ0 340 aaKnown RBP22.5■■□□□ 1.19
SND1-214ENST00000489417 TRAIPQ9BWF2 469 aa22.5■■□□□ 1.19
SND1-214ENST00000489417 MCOLN1Q9GZU1 580 aa22.5■■□□□ 1.19
SND1-214ENST00000489417 AIPL1Q9NZN9 384 aa22.5■■□□□ 1.19
SND1-214ENST00000489417 ITGA4P13612 1032 aa22.49■■□□□ 1.19
SND1-214ENST00000489417 STAT1P42224 750 aa22.49■■□□□ 1.19
SND1-214ENST00000489417 MFAP3P55082 362 aa22.49■■□□□ 1.19
SND1-214ENST00000489417 FAAP100Q0VG06 881 aa22.49■■□□□ 1.19
SND1-214ENST00000489417 ASIC2Q16515 512 aa22.49■■□□□ 1.19
SND1-214ENST00000489417 ARHGAP44Q17R89 818 aa22.49■■□□□ 1.19
SND1-214ENST00000489417 XKR4Q5GH76 650 aa22.49■■□□□ 1.19
SND1-214ENST00000489417 C1orf127Q8N9H9 656 aa22.49■■□□□ 1.19
SND1-214ENST00000489417 TATDN2Q93075 761 aa22.49■■□□□ 1.19
SND1-214ENST00000489417 FAM81BQ96LP2 452 aa22.49■■□□□ 1.19
SND1-214ENST00000489417 TSPAN18Q96SJ8 248 aa22.49■■□□□ 1.19
SND1-214ENST00000489417 CHP1Q99653 195 aa22.49■■□□□ 1.19
SND1-214ENST00000489417 ADAM2Q99965 735 aa22.49■■□□□ 1.19
SND1-214ENST00000489417 IFIH1Q9BYX4 1025 aaKnown RBP22.49■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms