RNA–Protein interactions for RNA: ENST00000488920.2

CCHCR1-215, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 3

Gene CCHCR1, Length 715 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-215ENST00000488920 BRCC3P46736 316 aa13.06□□□□□ -0.32
CCHCR1-215ENST00000488920 SPECC1Q5M775 1068 aa13.06□□□□□ -0.32
CCHCR1-215ENST00000488920 FAM173BQ6P4H8 233 aa13.06□□□□□ -0.32
CCHCR1-215ENST00000488920 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.06□□□□□ -0.32
CCHCR1-215ENST00000488920 MYCT1Q8N699 235 aa13.06□□□□□ -0.32
CCHCR1-215ENST00000488920 C3orf58Q8NDZ4 430 aa13.06□□□□□ -0.32
CCHCR1-215ENST00000488920 C18orf25Q96B23 403 aaPredicted RBP13.06□□□□□ -0.32
CCHCR1-215ENST00000488920 DDX27Q96GQ7 796 aaKnown RBP13.06□□□□□ -0.32
CCHCR1-215ENST00000488920 SNX27Q96L92 541 aa13.06□□□□□ -0.32
CCHCR1-215ENST00000488920 REEP2Q9BRK0 252 aa13.06□□□□□ -0.32
CCHCR1-215ENST00000488920 RHOBTB2Q9BYZ6 727 aa13.06□□□□□ -0.32
CCHCR1-215ENST00000488920 PRKD2Q9BZL6 878 aa13.06□□□□□ -0.32
CCHCR1-215ENST00000488920 KCNH6Q9H252 994 aa13.06□□□□□ -0.32
CCHCR1-215ENST00000488920 SLC38A7Q9NVC3 462 aa13.06□□□□□ -0.32
CCHCR1-215ENST00000488920 ZDHHC7Q9NXF8 308 aa13.06□□□□□ -0.32
CCHCR1-215ENST00000488920 LARSQ9P2J5 1176 aaKnown RBP13.06□□□□□ -0.32
CCHCR1-215ENST00000488920 WDFY4Q6ZS81 3184 aa13.06□□□□□ -0.32
CCHCR1-215ENST00000488920 PODXLO00592 558 aa13.05□□□□□ -0.32
CCHCR1-215ENST00000488920 CLDN3O15551 220 aa13.05□□□□□ -0.32
CCHCR1-215ENST00000488920 TRAPPC3O43617 180 aa13.05□□□□□ -0.32
CCHCR1-215ENST00000488920 KRT18P05783 430 aaKnown RBP13.05□□□□□ -0.32
CCHCR1-215ENST00000488920 SYT1P21579 422 aa13.05□□□□□ -0.32
CCHCR1-215ENST00000488920 TKTP29401 623 aaKnown RBP13.05□□□□□ -0.32
CCHCR1-215ENST00000488920 MARCKSP29966 332 aaPredicted RBP13.05□□□□□ -0.32
CCHCR1-215ENST00000488920 OR1D2P34982 312 aa13.05□□□□□ -0.32
CCHCR1-215ENST00000488920 VCPP55072 806 aaKnown RBP13.05□□□□□ -0.32
CCHCR1-215ENST00000488920 NOLC1Q14978 699 aaKnown RBP eCLIP13.05□□□□□ -0.32
CCHCR1-215ENST00000488920 SLC10A6Q3KNW5 377 aa13.05□□□□□ -0.32
CCHCR1-215ENST00000488920 PDXDC1Q6P996 788 aa13.05□□□□□ -0.32
CCHCR1-215ENST00000488920 RSPO2Q6UXX9 243 aaPredicted RBP13.05□□□□□ -0.32
CCHCR1-215ENST00000488920 ZPBP2Q6X784 338 aa13.05□□□□□ -0.32
CCHCR1-215ENST00000488920 USP49Q70CQ1 688 aa13.05□□□□□ -0.32
CCHCR1-215ENST00000488920 HAUS6Q7Z4H7 955 aa13.05□□□□□ -0.32
CCHCR1-215ENST00000488920 RAD54LQ92698 747 aa13.05□□□□□ -0.32
CCHCR1-215ENST00000488920 STAMQ92783 540 aa13.05□□□□□ -0.32
CCHCR1-215ENST00000488920 BICD1Q96G01 975 aa13.05□□□□□ -0.32
CCHCR1-215ENST00000488920 EPSTI1Q96J88 318 aa13.05□□□□□ -0.32
CCHCR1-215ENST00000488920 MYADMQ96S97 322 aa13.05□□□□□ -0.32
CCHCR1-215ENST00000488920 HAPLN2Q9GZV7 340 aa13.05□□□□□ -0.32
CCHCR1-215ENST00000488920 ZHX3Q9H4I2 956 aa13.05□□□□□ -0.32
CCHCR1-215ENST00000488920 KCNK12Q9HB15 430 aa13.05□□□□□ -0.32
CCHCR1-215ENST00000488920 CNTN3Q9P232 1028 aa13.05□□□□□ -0.32
CCHCR1-215ENST00000488920 FBXW11Q9UKB1 542 aa13.05□□□□□ -0.32
CCHCR1-215ENST00000488920 ODF2LQ9ULJ1 636 aa13.05□□□□□ -0.32
CCHCR1-215ENST00000488920 CLUHO75153 1309 aa13.05□□□□□ -0.32
CCHCR1-215ENST00000488920 TDRD15B5MCY1 1934 aaKnown RBP13.04□□□□□ -0.32
CCHCR1-215ENST00000488920 H0YCG3 227 aa13.04□□□□□ -0.32
CCHCR1-215ENST00000488920 FAM13AO94988 1023 aa13.04□□□□□ -0.32
CCHCR1-215ENST00000488920 PAPLNO95428 1278 aa13.04□□□□□ -0.32
CCHCR1-215ENST00000488920 AVPR2P30518 371 aa13.04□□□□□ -0.32
CCHCR1-215ENST00000488920 NCKAP1LP55160 1127 aa13.04□□□□□ -0.32
CCHCR1-215ENST00000488920 NHLH1Q02575 133 aa13.04□□□□□ -0.32
CCHCR1-215ENST00000488920 CEBPZQ03701 1054 aaKnown RBP13.04□□□□□ -0.32
CCHCR1-215ENST00000488920 SPAG1Q07617 926 aa13.04□□□□□ -0.32
CCHCR1-215ENST00000488920 MCL1Q07820 350 aa13.04□□□□□ -0.32
CCHCR1-215ENST00000488920 RESTQ13127 1097 aa13.04□□□□□ -0.32
CCHCR1-215ENST00000488920 TDGQ13569 410 aa13.04□□□□□ -0.32
CCHCR1-215ENST00000488920 RAB33AQ14088 237 aa13.04□□□□□ -0.32
CCHCR1-215ENST00000488920 PTPAQ15257 358 aa13.04□□□□□ -0.32
CCHCR1-215ENST00000488920 PPM1LQ5SGD2 360 aa13.04□□□□□ -0.32
CCHCR1-215ENST00000488920 AXDND1Q5T1B0 1012 aaPredicted RBP13.04□□□□□ -0.32
CCHCR1-215ENST00000488920 LIN9Q5TKA1 542 aa13.04□□□□□ -0.32
CCHCR1-215ENST00000488920 PRSS33Q8NF86 280 aa13.04□□□□□ -0.32
CCHCR1-215ENST00000488920 RSAD2Q8WXG1 361 aa13.04□□□□□ -0.32
CCHCR1-215ENST00000488920 MTRRQ9UBK8 725 aa13.04□□□□□ -0.32
CCHCR1-215ENST00000488920 TBX20Q9UMR3 447 aa13.04□□□□□ -0.32
CCHCR1-215ENST00000488920 CDY1Q9Y6F8 540 aa13.04□□□□□ -0.32
CCHCR1-215ENST00000488920 CCL16O15467 120 aa13.03□□□□□ -0.32
CCHCR1-215ENST00000488920 C8AP07357 584 aa13.03□□□□□ -0.32
CCHCR1-215ENST00000488920 CXCL8P10145 99 aa13.03□□□□□ -0.32
CCHCR1-215ENST00000488920 HOXD11P31277 338 aaPredicted RBP13.03□□□□□ -0.32
CCHCR1-215ENST00000488920 RPL9P32969 192 aaKnown RBP13.03□□□□□ -0.32
CCHCR1-215ENST00000488920 DDIT3P35638 169 aa13.03□□□□□ -0.32
CCHCR1-215ENST00000488920 LIG4P49917 911 aa13.03□□□□□ -0.32
CCHCR1-215ENST00000488920 NTHL1P78549 312 aa13.03□□□□□ -0.32
CCHCR1-215ENST00000488920 ANKS3Q6ZW76 656 aa13.03□□□□□ -0.32
CCHCR1-215ENST00000488920 GET4Q7L5D6 327 aaPredicted RBP13.03□□□□□ -0.32
CCHCR1-215ENST00000488920 GRASPQ7Z6J2 395 aaPredicted RBP13.03□□□□□ -0.32
CCHCR1-215ENST00000488920 TMEM130Q8N3G9 435 aa13.03□□□□□ -0.32
CCHCR1-215ENST00000488920 ST13P5Q8NFI4 369 aaPredicted RBP13.03□□□□□ -0.32
CCHCR1-215ENST00000488920 SLC7A14Q8TBB6 771 aa13.03□□□□□ -0.32
CCHCR1-215ENST00000488920 CLIC6Q96NY7 704 aa13.03□□□□□ -0.32
CCHCR1-215ENST00000488920 CCSER1Q9C0I3 900 aa13.03□□□□□ -0.32
CCHCR1-215ENST00000488920 PARVGQ9HBI0 331 aa13.03□□□□□ -0.32
CCHCR1-215ENST00000488920 EPS15L1Q9UBC2 864 aa13.03□□□□□ -0.32
CCHCR1-215ENST00000488920 FBXO2Q9UK22 296 aaPredicted RBP13.03□□□□□ -0.32
CCHCR1-215ENST00000488920 POLIQ9UNA4 740 aa13.03□□□□□ -0.32
CCHCR1-215ENST00000488920 NUB1Q9Y5A7 615 aa13.03□□□□□ -0.32
CCHCR1-215ENST00000488920 BACE2Q9Y5Z0 518 aa13.03□□□□□ -0.32
CCHCR1-215ENST00000488920 K7ENM7 598 aa13.02□□□□□ -0.33
CCHCR1-215ENST00000488920 NARSO43776 548 aaKnown RBP13.02□□□□□ -0.33
CCHCR1-215ENST00000488920 TRAK2O60296 914 aa13.02□□□□□ -0.33
CCHCR1-215ENST00000488920 TBCAO75347 108 aaKnown RBP13.02□□□□□ -0.33
CCHCR1-215ENST00000488920 CLTAP09496 248 aa13.02□□□□□ -0.33
CCHCR1-215ENST00000488920 HNRNPA1P09651 372 aaKnown RBP eCLIP13.02□□□□□ -0.33
CCHCR1-215ENST00000488920 LAMP2P13473 410 aa13.02□□□□□ -0.33
CCHCR1-215ENST00000488920 FSHRP23945 695 aa13.02□□□□□ -0.33
CCHCR1-215ENST00000488920 NMT1P30419 496 aaKnown RBP13.02□□□□□ -0.33
CCHCR1-215ENST00000488920 TNFSF9P41273 254 aa13.02□□□□□ -0.33
CCHCR1-215ENST00000488920 ZNF131P52739 623 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms