RNA–Protein interactions for RNA: ENST00000486516.5

COMMD6-211, Transcript of COMM domain containing 6, humanhuman

TSL 5

Gene COMMD6, Length 374 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD6-211ENST00000486516 PFKMP08237 780 aa3.4□□□□□ -1.87
COMMD6-211ENST00000486516 LTA4HP09960 611 aaKnown RBP3.4□□□□□ -1.87
COMMD6-211ENST00000486516 SLC6A2P23975 617 aa3.4□□□□□ -1.87
COMMD6-211ENST00000486516 FLT3LGP49771 235 aa3.4□□□□□ -1.87
COMMD6-211ENST00000486516 LAMB3Q13751 1172 aa3.4□□□□□ -1.87
COMMD6-211ENST00000486516 RAB33AQ14088 237 aa3.4□□□□□ -1.87
COMMD6-211ENST00000486516 LRRC41Q15345 812 aa3.4□□□□□ -1.87
COMMD6-211ENST00000486516 MTERF2Q49AM1 385 aa3.4□□□□□ -1.87
COMMD6-211ENST00000486516 VWA1Q6PCB0 445 aa3.4□□□□□ -1.87
COMMD6-211ENST00000486516 FBXO18Q8NFZ0 1043 aa3.4□□□□□ -1.87
COMMD6-211ENST00000486516 FBXL20Q96IG2 436 aa3.4□□□□□ -1.87
COMMD6-211ENST00000486516 CAMKK2Q96RR4 588 aa3.4□□□□□ -1.87
COMMD6-211ENST00000486516 SEMA4CQ9C0C4 833 aa3.4□□□□□ -1.87
COMMD6-211ENST00000486516 ZMAT4Q9H898 229 aa3.4□□□□□ -1.87
COMMD6-211ENST00000486516 SAMD15Q9P1V8 674 aa3.4□□□□□ -1.87
COMMD6-211ENST00000486516 PADI4Q9UM07 663 aa3.4□□□□□ -1.87
COMMD6-211ENST00000486516 TRGV11A0A075B6L2 103 aa3.39□□□□□ -1.87
COMMD6-211ENST00000486516 MPPED1O15442 326 aa3.39□□□□□ -1.87
COMMD6-211ENST00000486516 PDPK1O15530 556 aa3.39□□□□□ -1.87
COMMD6-211ENST00000486516 PJA2O43164 708 aa3.39□□□□□ -1.87
COMMD6-211ENST00000486516 GAS8-AS1O95177 125 aa3.39□□□□□ -1.87
COMMD6-211ENST00000486516 CYP2D6P10635 497 aa3.39□□□□□ -1.87
COMMD6-211ENST00000486516 GCSHP23434 173 aa3.39□□□□□ -1.87
COMMD6-211ENST00000486516 SLC44A4Q53GD3 710 aa3.39□□□□□ -1.87
COMMD6-211ENST00000486516 CREB3L3Q68CJ9 461 aa3.39□□□□□ -1.87
COMMD6-211ENST00000486516 COLGALT2Q8IYK4 626 aa3.39□□□□□ -1.87
COMMD6-211ENST00000486516 HAPLN3Q96S86 360 aa3.39□□□□□ -1.87
COMMD6-211ENST00000486516 REXO4Q9GZR2 422 aaKnown RBP3.39□□□□□ -1.87
COMMD6-211ENST00000486516 TOMM22Q9NS69 142 aa3.39□□□□□ -1.87
COMMD6-211ENST00000486516 SIK3Q9Y2K2 1263 aa3.39□□□□□ -1.87
COMMD6-211ENST00000486516 PPP6CO00743 305 aa3.38□□□□□ -1.87
COMMD6-211ENST00000486516 ERN1O75460 977 aaKnown RBP3.38□□□□□ -1.87
COMMD6-211ENST00000486516 XPAP23025 273 aaPredicted RBP3.38□□□□□ -1.87
COMMD6-211ENST00000486516 MMP13P45452 471 aa3.38□□□□□ -1.87
COMMD6-211ENST00000486516 FAM47AQ5JRC9 791 aa3.38□□□□□ -1.87
COMMD6-211ENST00000486516 FOXR2Q6PJQ5 311 aa3.38□□□□□ -1.87
COMMD6-211ENST00000486516 SNX33Q8WV41 574 aa3.38□□□□□ -1.87
COMMD6-211ENST00000486516 ZNF428Q96B54 188 aa3.38□□□□□ -1.87
COMMD6-211ENST00000486516 TRIM39Q9HCM9 518 aa3.38□□□□□ -1.87
COMMD6-211ENST00000486516 H2AFY2Q9P0M6 372 aaPredicted RBP3.38□□□□□ -1.87
COMMD6-211ENST00000486516 HSFX1Q9UBD0 423 aa3.38□□□□□ -1.87
COMMD6-211ENST00000486516 EVLQ9UI08 416 aaPredicted RBP3.38□□□□□ -1.87
COMMD6-211ENST00000486516 MSRB2Q9Y3D2 182 aa3.38□□□□□ -1.87
COMMD6-211ENST00000486516 MYMKA6NI61 221 aa3.37□□□□□ -1.87
COMMD6-211ENST00000486516 CCDC85CA6NKD9 419 aa3.37□□□□□ -1.87
COMMD6-211ENST00000486516 KCNU1A8MYU2 1149 aa3.37□□□□□ -1.87
COMMD6-211ENST00000486516 NRP2O60462 931 aa3.37□□□□□ -1.87
COMMD6-211ENST00000486516 CHRM2P08172 466 aa3.37□□□□□ -1.87
COMMD6-211ENST00000486516 NHLRC4P0CG21 123 aaPredicted RBP3.37□□□□□ -1.87
COMMD6-211ENST00000486516 PPARAQ07869 468 aa3.37□□□□□ -1.87
COMMD6-211ENST00000486516 RRP12Q5JTH9 1297 aaKnown RBP3.37□□□□□ -1.87
COMMD6-211ENST00000486516 SUMO4Q6EEV6 95 aa3.37□□□□□ -1.87
COMMD6-211ENST00000486516 ZCCHC8Q6NZY4 707 aaKnown RBP3.37□□□□□ -1.87
COMMD6-211ENST00000486516 IRF2BP2Q7Z5L9 587 aa3.37□□□□□ -1.87
COMMD6-211ENST00000486516 DDX53Q86TM3 631 aaKnown RBP3.37□□□□□ -1.87
COMMD6-211ENST00000486516 KRT73Q86Y46 540 aa3.37□□□□□ -1.87
COMMD6-211ENST00000486516 LPIN2Q92539 896 aa3.37□□□□□ -1.87
COMMD6-211ENST00000486516 ZBTB32Q9Y2Y4 487 aaPredicted RBP3.37□□□□□ -1.87
COMMD6-211ENST00000486516 ST20-MTHFSA0A0A6YYL1 179 aa3.36□□□□□ -1.87
COMMD6-211ENST00000486516 LCHNA4D1U4 455 aa3.36□□□□□ -1.87
COMMD6-211ENST00000486516 SNRPA1P09661 255 aaKnown RBP3.36□□□□□ -1.87
COMMD6-211ENST00000486516 CERS1P27544 350 aa3.36□□□□□ -1.87
COMMD6-211ENST00000486516 PTPN7P35236 360 aa3.36□□□□□ -1.87
COMMD6-211ENST00000486516 NRG3P56975 720 aa3.36□□□□□ -1.87
COMMD6-211ENST00000486516 NANOS2P60321 138 aaKnown RBP3.36□□□□□ -1.87
COMMD6-211ENST00000486516 ARID5AQ03989 594 aa3.36□□□□□ -1.87
COMMD6-211ENST00000486516 TXNRD1Q16881 649 aa3.36□□□□□ -1.87
COMMD6-211ENST00000486516 C19orf54Q5BKX5 351 aa3.36□□□□□ -1.87
COMMD6-211ENST00000486516 PDZD4Q76G19 769 aaPredicted RBP3.36□□□□□ -1.87
COMMD6-211ENST00000486516 NRACQ8N912 160 aa3.36□□□□□ -1.87
COMMD6-211ENST00000486516 TOR1AIP2Q8NFQ8 470 aa3.36□□□□□ -1.87
COMMD6-211ENST00000486516 SLC30A5Q8TAD4 765 aa3.36□□□□□ -1.87
COMMD6-211ENST00000486516 MARS2Q96GW9 593 aaKnown RBP3.36□□□□□ -1.87
COMMD6-211ENST00000486516 ZNF496Q96IT1 587 aaPredicted RBP3.36□□□□□ -1.87
COMMD6-211ENST00000486516 TUBA8Q9NY65 449 aaPredicted RBP3.36□□□□□ -1.87
COMMD6-211ENST00000486516 AFG3L2Q9Y4W6 797 aa3.36□□□□□ -1.87
COMMD6-211ENST00000486516 SPO11Q9Y5K1 396 aa3.36□□□□□ -1.87
COMMD6-211ENST00000486516 ATRNL1Q5VV63 1379 aa3.36□□□□□ -1.87
COMMD6-211ENST00000486516 PRSS38A1L453 326 aa3.35□□□□□ -1.87
COMMD6-211ENST00000486516 GTPBP1O00178 669 aaKnown RBP3.35□□□□□ -1.87
COMMD6-211ENST00000486516 KRT86O43790 486 aa3.35□□□□□ -1.87
COMMD6-211ENST00000486516 ALPLP05186 524 aa3.35□□□□□ -1.87
COMMD6-211ENST00000486516 SRGNP10124 158 aa3.35□□□□□ -1.87
COMMD6-211ENST00000486516 THBS3P49746 956 aa3.35□□□□□ -1.87
COMMD6-211ENST00000486516 RASGRF1Q13972 1273 aa3.35□□□□□ -1.87
COMMD6-211ENST00000486516 KRT81Q14533 505 aa3.35□□□□□ -1.87
COMMD6-211ENST00000486516 FAM153CQ494X1 144 aa3.35□□□□□ -1.87
COMMD6-211ENST00000486516 LYSMD2Q8IV50 215 aa3.35□□□□□ -1.87
COMMD6-211ENST00000486516 GLB1L2Q8IW92 636 aa3.35□□□□□ -1.87
COMMD6-211ENST00000486516 SYNPOQ8N3V7 929 aa3.35□□□□□ -1.87
COMMD6-211ENST00000486516 Q8NA96 180 aa3.35□□□□□ -1.87
COMMD6-211ENST00000486516 PRDM12Q9H4Q4 367 aa3.35□□□□□ -1.87
COMMD6-211ENST00000486516 TMEM260Q9NX78 707 aa3.35□□□□□ -1.87
COMMD6-211ENST00000486516 VWC2LB2RUY7 222 aa3.34□□□□□ -1.87
COMMD6-211ENST00000486516 TISP43B9A030 160 aa3.34□□□□□ -1.87
COMMD6-211ENST00000486516 PROM1O43490 865 aa3.34□□□□□ -1.87
COMMD6-211ENST00000486516 GASTP01350 101 aa3.34□□□□□ -1.87
COMMD6-211ENST00000486516 CTSSP25774 331 aa3.34□□□□□ -1.87
COMMD6-211ENST00000486516 ARHGAP25P42331 645 aa3.34□□□□□ -1.87
COMMD6-211ENST00000486516 RANGAP1P46060 587 aaPredicted RBP3.34□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms