RNA–Protein interactions for RNA: ENST00000483687.5

PCCB-216, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

TSL 3 BASIC

Gene PCCB, Length 1,727 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-216ENST00000483687 ANKRD36BP1Q96IX9 119 aa20.54■□□□□ 0.88
PCCB-216ENST00000483687 CNTN3Q9P232 1028 aa20.54■□□□□ 0.88
PCCB-216ENST00000483687 SIK3Q9Y2K2 1263 aa20.54■□□□□ 0.88
PCCB-216ENST00000483687 PMM2O15305 246 aa20.53■□□□□ 0.88
PCCB-216ENST00000483687 C4BPAP04003 597 aaKnown RBP20.53■□□□□ 0.88
PCCB-216ENST00000483687 ZACNQ401N2 412 aa20.53■□□□□ 0.88
PCCB-216ENST00000483687 TDRD10Q5VZ19 366 aaKnown RBP20.53■□□□□ 0.88
PCCB-216ENST00000483687 ALKAL1Q6UXT8 129 aa20.53■□□□□ 0.88
PCCB-216ENST00000483687 C15orf39Q6ZRI6 1047 aa20.53■□□□□ 0.88
PCCB-216ENST00000483687 NT5DC4Q86YG4 428 aa20.53■□□□□ 0.88
PCCB-216ENST00000483687 FBXL13Q8NEE6 735 aa20.53■□□□□ 0.88
PCCB-216ENST00000483687 CACTINQ8WUQ7 758 aaKnown RBP20.53■□□□□ 0.88
PCCB-216ENST00000483687 KIF12Q96FN5 646 aa20.53■□□□□ 0.88
PCCB-216ENST00000483687 HTATIP2Q9BUP3 242 aa20.53■□□□□ 0.88
PCCB-216ENST00000483687 CXCL16Q9H2A7 254 aa20.53■□□□□ 0.88
PCCB-216ENST00000483687 C2CD2Q9Y426 696 aa20.53■□□□□ 0.88
PCCB-216ENST00000483687 MICAL3Q7RTP6 2002 aa20.53■□□□□ 0.88
PCCB-216ENST00000483687 TNNC2P02585 160 aa20.53■□□□□ 0.88
PCCB-216ENST00000483687 CSF2RAP15509 400 aa20.53■□□□□ 0.88
PCCB-216ENST00000483687 ATF7P17544 494 aaPredicted RBP20.53■□□□□ 0.88
PCCB-216ENST00000483687 TRIM21P19474 475 aaKnown RBP20.53■□□□□ 0.88
PCCB-216ENST00000483687 SLC9A1P19634 815 aa20.53■□□□□ 0.88
PCCB-216ENST00000483687 TCTN1Q2MV58 587 aa20.53■□□□□ 0.88
PCCB-216ENST00000483687 GLRA4Q5JXX5 417 aa20.53■□□□□ 0.88
PCCB-216ENST00000483687 AGMOQ6ZNB7 445 aa20.53■□□□□ 0.88
PCCB-216ENST00000483687 C7orf61Q8IZ16 206 aa20.53■□□□□ 0.88
PCCB-216ENST00000483687 TAS1R2Q8TE23 839 aa20.53■□□□□ 0.88
PCCB-216ENST00000483687 LSM14BQ9BX40 385 aaKnown RBP20.53■□□□□ 0.88
PCCB-216ENST00000483687 FAM207AQ9NSI2 230 aaPredicted RBP20.53■□□□□ 0.88
PCCB-216ENST00000483687 GIT1Q9Y2X7 761 aa20.53■□□□□ 0.88
PCCB-216ENST00000483687 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP20.53■□□□□ 0.88
PCCB-216ENST00000483687 ENPP3O14638 875 aa20.52■□□□□ 0.88
PCCB-216ENST00000483687 PHACTR2O75167 634 aa20.52■□□□□ 0.88
PCCB-216ENST00000483687 PON1P27169 355 aa20.52■□□□□ 0.88
PCCB-216ENST00000483687 MLH1P40692 756 aa20.52■□□□□ 0.88
PCCB-216ENST00000483687 EPC2Q52LR7 807 aa20.52■□□□□ 0.88
PCCB-216ENST00000483687 CNKSR3Q6P9H4 555 aa20.52■□□□□ 0.88
PCCB-216ENST00000483687 TRAPPC11Q7Z392 1133 aa20.52■□□□□ 0.88
PCCB-216ENST00000483687 ZMAT2Q96NC0 199 aaKnown RBP20.52■□□□□ 0.88
PCCB-216ENST00000483687 RSAD1Q9HA92 442 aa20.52■□□□□ 0.88
PCCB-216ENST00000483687 DERAQ9Y315 318 aa20.52■□□□□ 0.88
PCCB-216ENST00000483687 COQ4Q9Y3A0 265 aa20.52■□□□□ 0.88
PCCB-216ENST00000483687 GOLGA6L6A8MZA4 724 aa20.51■□□□□ 0.87
PCCB-216ENST00000483687 EOMESO95936 686 aa20.51■□□□□ 0.87
PCCB-216ENST00000483687 PIK3CAP42336 1068 aa20.51■□□□□ 0.87
PCCB-216ENST00000483687 FAM189BP81408 668 aa20.51■□□□□ 0.87
PCCB-216ENST00000483687 XKR4Q5GH76 650 aa20.51■□□□□ 0.87
PCCB-216ENST00000483687 TRIM65Q6PJ69 517 aa20.51■□□□□ 0.87
PCCB-216ENST00000483687 ZNF598Q86UK7 904 aaKnown RBP20.51■□□□□ 0.87
PCCB-216ENST00000483687 EHBP1Q8NDI1 1231 aa20.51■□□□□ 0.87
PCCB-216ENST00000483687 NEK11Q8NG66 645 aa20.51■□□□□ 0.87
PCCB-216ENST00000483687 ZFP42Q96MM3 310 aa20.51■□□□□ 0.87
PCCB-216ENST00000483687 RPS6KC1Q96S38 1066 aa20.51■□□□□ 0.87
PCCB-216ENST00000483687 GAD1Q99259 594 aa20.51■□□□□ 0.87
PCCB-216ENST00000483687 UBN1Q9NPG3 1134 aa20.51■□□□□ 0.87
PCCB-216ENST00000483687 RNF19AQ9NV58 838 aa20.51■□□□□ 0.87
PCCB-216ENST00000483687 RAB20Q9NX57 234 aa20.51■□□□□ 0.87
PCCB-216ENST00000483687 PCDH10Q9P2E7 1040 aa20.51■□□□□ 0.87
PCCB-216ENST00000483687 TTC3P53804 2025 aa20.5■□□□□ 0.87
PCCB-216ENST00000483687 SMIM28A0A1B0GU29 152 aa20.5■□□□□ 0.87
PCCB-216ENST00000483687 ACTN1P12814 892 aa20.5■□□□□ 0.87
PCCB-216ENST00000483687 KCNE1P15382 129 aa20.5■□□□□ 0.87
PCCB-216ENST00000483687 IKBKEQ14164 716 aa20.5■□□□□ 0.87
PCCB-216ENST00000483687 RPUSD2Q8IZ73 545 aaKnown RBP20.5■□□□□ 0.87
PCCB-216ENST00000483687 VWCEQ96DN2 955 aa20.5■□□□□ 0.87
PCCB-216ENST00000483687 PPP1R9BQ96SB3 815 aa20.5■□□□□ 0.87
PCCB-216ENST00000483687 NUP58Q9BVL2 599 aa20.5■□□□□ 0.87
PCCB-216ENST00000483687 INTS2Q9H0H0 1204 aaKnown RBP20.5■□□□□ 0.87
PCCB-216ENST00000483687 IMPACTQ9P2X3 320 aa20.5■□□□□ 0.87
PCCB-216ENST00000483687 ARL5CA6NH57 179 aa20.5■□□□□ 0.87
PCCB-216ENST00000483687 EVI5O60447 810 aa20.5■□□□□ 0.87
PCCB-216ENST00000483687 HLA-DRAP01903 254 aa20.5■□□□□ 0.87
PCCB-216ENST00000483687 APBA1Q02410 837 aa20.5■□□□□ 0.87
PCCB-216ENST00000483687 TRIM14Q14142 442 aa20.5■□□□□ 0.87
PCCB-216ENST00000483687 PPFIBP1Q86W92 1011 aa20.5■□□□□ 0.87
PCCB-216ENST00000483687 LMO3Q8TAP4 145 aa20.5■□□□□ 0.87
PCCB-216ENST00000483687 SEMA4DQ92854 862 aa20.5■□□□□ 0.87
PCCB-216ENST00000483687 TSPAN18Q96SJ8 248 aa20.5■□□□□ 0.87
PCCB-216ENST00000483687 TMEM161AQ9NX61 479 aa20.5■□□□□ 0.87
PCCB-216ENST00000483687 TDRD15B5MCY1 1934 aaKnown RBP20.49■□□□□ 0.87
PCCB-216ENST00000483687 LRRN2O75325 713 aa20.49■□□□□ 0.87
PCCB-216ENST00000483687 VNN1O95497 513 aa20.49■□□□□ 0.87
PCCB-216ENST00000483687 PFKMP08237 780 aa20.49■□□□□ 0.87
PCCB-216ENST00000483687 TRPC3Q13507 836 aa20.49■□□□□ 0.87
PCCB-216ENST00000483687 NCOA4Q13772 614 aa20.49■□□□□ 0.87
PCCB-216ENST00000483687 C1orf127Q8N9H9 656 aa20.49■□□□□ 0.87
PCCB-216ENST00000483687 BEST2Q8NFU1 509 aa20.49■□□□□ 0.87
PCCB-216ENST00000483687 CPLX3Q8WVH0 158 aa20.49■□□□□ 0.87
PCCB-216ENST00000483687 PLCB1Q9NQ66 1216 aa20.49■□□□□ 0.87
PCCB-216ENST00000483687 UTP3Q9NQZ2 479 aaKnown RBP eCLIP20.49■□□□□ 0.872e-23■■■■■ 142.5
PCCB-216ENST00000483687 DPP3Q9NY33 737 aa20.49■□□□□ 0.87
PCCB-216ENST00000483687 UBQLN1Q9UMX0 589 aaKnown RBP20.49■□□□□ 0.87
PCCB-216ENST00000483687 PCDHB7Q9Y5E2 793 aa20.49■□□□□ 0.87
PCCB-216ENST00000483687 LOC101059915A0A1B0GWI6 518 aaPredicted RBP20.48■□□□□ 0.87
PCCB-216ENST00000483687 PTGESO14684 152 aa20.48■□□□□ 0.87
PCCB-216ENST00000483687 EPHB6O15197 1021 aa20.48■□□□□ 0.87
PCCB-216ENST00000483687 XPOTO43592 962 aaKnown RBP20.48■□□□□ 0.87
PCCB-216ENST00000483687 CLSTN1O94985 981 aa20.48■□□□□ 0.87
PCCB-216ENST00000483687 GYPCP04921 128 aa20.48■□□□□ 0.87
PCCB-216ENST00000483687 KRT19P08727 400 aa20.48■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms