RNA–Protein interactions for RNA: ENST00000481057.1

CBX3-206, Transcript of chromobox 3, humanhuman

TSL 2

Gene CBX3, Length 860 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-206ENST00000481057 OR10A5Q9H207 317 aa8.3□□□□□ -1.08
CBX3-206ENST00000481057 MCM8Q9UJA3 840 aa8.3□□□□□ -1.08
CBX3-206ENST00000481057 ACACBO00763 2458 aa8.3□□□□□ -1.08
CBX3-206ENST00000481057 TAF1P21675 1872 aa8.3□□□□□ -1.08
CBX3-206ENST00000481057 EDC4Q6P2E9 1401 aaKnown RBP8.29□□□□□ -1.08
CBX3-206ENST00000481057 DDX3XO00571 662 aaKnown RBP eCLIP8.29□□□□□ -1.08
CBX3-206ENST00000481057 PTPROQ16827 1216 aa8.29□□□□□ -1.08
CBX3-206ENST00000481057 TTC38Q5R3I4 469 aa8.29□□□□□ -1.08
CBX3-206ENST00000481057 KANK2Q63ZY3 851 aa8.29□□□□□ -1.08
CBX3-206ENST00000481057 DPP8Q6V1X1 898 aaPredicted RBP8.29□□□□□ -1.08
CBX3-206ENST00000481057 DDX42Q86XP3 938 aaKnown RBP eCLIP8.29□□□□□ -1.08
CBX3-206ENST00000481057 ZNF610Q8N9Z0 462 aa8.29□□□□□ -1.08
CBX3-206ENST00000481057 GPATCH3Q96I76 525 aa8.29□□□□□ -1.08
CBX3-206ENST00000481057 MAML3Q96JK9 1138 aa8.29□□□□□ -1.08
CBX3-206ENST00000481057 LBHD1Q9BQE6 289 aaPredicted RBP8.29□□□□□ -1.08
CBX3-206ENST00000481057 RTFDC1Q9BY42 306 aaPredicted RBP8.29□□□□□ -1.08
CBX3-206ENST00000481057 L2HGDHQ9H9P8 463 aa8.29□□□□□ -1.08
CBX3-206ENST00000481057 PCDH12Q9NPG4 1184 aa8.29□□□□□ -1.08
CBX3-206ENST00000481057 ATP8A1Q9Y2Q0 1164 aa8.29□□□□□ -1.08
CBX3-206ENST00000481057 NCOR2Q9Y618 2525 aa8.28□□□□□ -1.08
CBX3-206ENST00000481057 GPR39O43194 453 aa8.28□□□□□ -1.08
CBX3-206ENST00000481057 ULK1O75385 1050 aa8.28□□□□□ -1.08
CBX3-206ENST00000481057 CAMTA2O94983 1202 aa8.28□□□□□ -1.08
CBX3-206ENST00000481057 HOXD10P28358 340 aa8.28□□□□□ -1.08
CBX3-206ENST00000481057 LSP1P33241 339 aa8.28□□□□□ -1.08
CBX3-206ENST00000481057 SLURP1P55000 103 aa8.28□□□□□ -1.08
CBX3-206ENST00000481057 SLC6A3Q01959 620 aa8.28□□□□□ -1.08
CBX3-206ENST00000481057 ROM1Q03395 351 aa8.28□□□□□ -1.08
CBX3-206ENST00000481057 CRY2Q49AN0 593 aa8.28□□□□□ -1.08
CBX3-206ENST00000481057 BROXQ5VW32 411 aa8.28□□□□□ -1.08
CBX3-206ENST00000481057 CXXC5Q7LFL8 322 aaKnown RBP8.28□□□□□ -1.08
CBX3-206ENST00000481057 HDGFL2Q7Z4V5 671 aaPredicted RBP8.28□□□□□ -1.08
CBX3-206ENST00000481057 KRTAP19-1Q8IUB9 90 aa8.28□□□□□ -1.08
CBX3-206ENST00000481057 PHYKPLQ8IUZ5 450 aa8.28□□□□□ -1.08
CBX3-206ENST00000481057 C7orf31Q8N865 590 aa8.28□□□□□ -1.08
CBX3-206ENST00000481057 ATL2Q8NHH9 583 aa8.28□□□□□ -1.08
CBX3-206ENST00000481057 ADAMTS17Q8TE56 1095 aa8.28□□□□□ -1.08
CBX3-206ENST00000481057 YTHDC1Q96MU7 727 aaKnown RBP8.28□□□□□ -1.08
CBX3-206ENST00000481057 KRTAP4-12Q9BQ66 201 aa8.28□□□□□ -1.08
CBX3-206ENST00000481057 SPATA25Q9BR10 227 aa8.28□□□□□ -1.08
CBX3-206ENST00000481057 BRINP2Q9C0B6 783 aa8.28□□□□□ -1.08
CBX3-206ENST00000481057 TMX4Q9H1E5 349 aaPredicted RBP8.28□□□□□ -1.08
CBX3-206ENST00000481057 MS4A5Q9H3V2 200 aa8.28□□□□□ -1.08
CBX3-206ENST00000481057 ZNF292O60281 2723 aa8.27□□□□□ -1.09
CBX3-206ENST00000481057 H0Y858 1186 aa8.27□□□□□ -1.09
CBX3-206ENST00000481057 KLHL18O94889 574 aa8.27□□□□□ -1.09
CBX3-206ENST00000481057 CTGFP29279 349 aa8.27□□□□□ -1.09
CBX3-206ENST00000481057 TMPRSS15P98073 1019 aa8.27□□□□□ -1.09
CBX3-206ENST00000481057 MYBPC3Q14896 1274 aa8.27□□□□□ -1.09
CBX3-206ENST00000481057 FAM26FQ5R3K3 315 aa8.27□□□□□ -1.09
CBX3-206ENST00000481057 C9orf50Q5SZB4 431 aa8.27□□□□□ -1.09
CBX3-206ENST00000481057 SLFN12LQ6IEE8 588 aa8.27□□□□□ -1.09
CBX3-206ENST00000481057 LCNL1Q6ZST4 164 aa8.27□□□□□ -1.09
CBX3-206ENST00000481057 ZNF761Q86XN6 746 aaPredicted RBP8.27□□□□□ -1.09
CBX3-206ENST00000481057 WDR66Q8TBY9 1149 aa8.27□□□□□ -1.09
CBX3-206ENST00000481057 ANKS1AQ92625 1134 aa8.27□□□□□ -1.09
CBX3-206ENST00000481057 TUBGCP5Q96RT8 1024 aa8.27□□□□□ -1.09
CBX3-206ENST00000481057 C11orf49Q9H6J7 331 aa8.27□□□□□ -1.09
CBX3-206ENST00000481057 USP36Q9P275 1121 aaKnown RBP8.27□□□□□ -1.09
CBX3-206ENST00000481057 FTSJ1Q9UET6 329 aa8.27□□□□□ -1.09
CBX3-206ENST00000481057 LAMB1P07942 1786 aa8.27□□□□□ -1.09
CBX3-206ENST00000481057 ADAMTS20P59510 1910 aa8.27□□□□□ -1.09
CBX3-206ENST00000481057 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP8.26□□□□□ -1.09
CBX3-206ENST00000481057 TRIM13O60858 407 aa8.26□□□□□ -1.09
CBX3-206ENST00000481057 MAFO75444 373 aaPredicted RBP8.26□□□□□ -1.09
CBX3-206ENST00000481057 ZSCAN22P10073 491 aaPredicted RBP8.26□□□□□ -1.09
CBX3-206ENST00000481057 APEX1P27695 318 aaKnown RBP8.26□□□□□ -1.09
CBX3-206ENST00000481057 RGS3P49796 1198 aa8.26□□□□□ -1.09
CBX3-206ENST00000481057 SESN3P58005 492 aa8.26□□□□□ -1.09
CBX3-206ENST00000481057 JAG1P78504 1218 aa8.26□□□□□ -1.09
CBX3-206ENST00000481057 ST3GAL2Q16842 350 aa8.26□□□□□ -1.09
CBX3-206ENST00000481057 WDR72Q3MJ13 1102 aa8.26□□□□□ -1.09
CBX3-206ENST00000481057 PRAMEF9Q5VWM5 478 aa8.26□□□□□ -1.09
CBX3-206ENST00000481057 SPATS2Q86XZ4 545 aaKnown RBP8.26□□□□□ -1.09
CBX3-206ENST00000481057 TXNDC5Q8NBS9 432 aaKnown RBP8.26□□□□□ -1.09
CBX3-206ENST00000481057 CLRN3Q8NCR9 226 aa8.26□□□□□ -1.09
CBX3-206ENST00000481057 NUDT10Q8NFP7 164 aa8.26□□□□□ -1.09
CBX3-206ENST00000481057 WDR48Q8TAF3 677 aa8.26□□□□□ -1.09
CBX3-206ENST00000481057 RPGRQ92834 1020 aaKnown RBP8.26□□□□□ -1.09
CBX3-206ENST00000481057 NUDT11Q96G61 164 aa8.26□□□□□ -1.09
CBX3-206ENST00000481057 CLMNQ96JQ2 1002 aa8.26□□□□□ -1.09
CBX3-206ENST00000481057 LUC7LQ9NQ29 371 aaKnown RBP8.26□□□□□ -1.09
CBX3-206ENST00000481057 FZD1Q9UP38 647 aa8.26□□□□□ -1.09
CBX3-206ENST00000481057 MYPNQ86TC9 1320 aa8.26□□□□□ -1.09
CBX3-206ENST00000481057 COL3A1P02461 1466 aaPredicted RBP8.26□□□□□ -1.09
CBX3-206ENST00000481057 ST20-MTHFSA0A0A6YYL1 179 aa8.25□□□□□ -1.09
CBX3-206ENST00000481057 LCHNA4D1U4 455 aa8.25□□□□□ -1.09
CBX3-206ENST00000481057 PSMC4P43686 418 aa8.25□□□□□ -1.09
CBX3-206ENST00000481057 MTHFSP49914 203 aa8.25□□□□□ -1.09
CBX3-206ENST00000481057 CDKN1CP49918 316 aaPredicted RBP8.25□□□□□ -1.09
CBX3-206ENST00000481057 CD83Q01151 205 aa8.25□□□□□ -1.09
CBX3-206ENST00000481057 RNF219Q5W0B1 726 aaPredicted RBP8.25□□□□□ -1.09
CBX3-206ENST00000481057 MCTP2Q6DN12 878 aa8.25□□□□□ -1.09
CBX3-206ENST00000481057 SP8Q8IXZ3 490 aa8.25□□□□□ -1.09
CBX3-206ENST00000481057 ZDHHC5Q9C0B5 715 aa8.25□□□□□ -1.09
CBX3-206ENST00000481057 SEMA4AQ9H3S1 761 aa8.25□□□□□ -1.09
CBX3-206ENST00000481057 POFUT1Q9H488 388 aa8.25□□□□□ -1.09
CBX3-206ENST00000481057 MSRAQ9UJ68 235 aa8.25□□□□□ -1.09
CBX3-206ENST00000481057 DNAH14Q0VDD8 3507 aa8.24□□□□□ -1.09
CBX3-206ENST00000481057 KDM1AO60341 852 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms