RNA–Protein interactions for RNA: ENST00000480055.5

SMURF1-204, Transcript of SMAD specific E3 ubiquitin protein ligase 1, humanhuman

TSL 3

Gene SMURF1, Length 1,012 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMURF1-204ENST00000480055 SLFN12Q8IYM2 578 aa11.46□□□□□ -0.57
SMURF1-204ENST00000480055 FAM177A1Q8N128 213 aaPredicted RBP11.46□□□□□ -0.57
SMURF1-204ENST00000480055 SHDQ96IW2 340 aa11.46□□□□□ -0.57
SMURF1-204ENST00000480055 DDX23Q9BUQ8 820 aaKnown RBP11.46□□□□□ -0.57
SMURF1-204ENST00000480055 PHF20Q9BVI0 1012 aa11.46□□□□□ -0.57
SMURF1-204ENST00000480055 PRKD2Q9BZL6 878 aa11.46□□□□□ -0.57
SMURF1-204ENST00000480055 CHST7Q9NS84 486 aa11.46□□□□□ -0.57
SMURF1-204ENST00000480055 PDRG1Q9NUG6 133 aa11.46□□□□□ -0.57
SMURF1-204ENST00000480055 KLK14Q9P0G3 267 aa11.46□□□□□ -0.57
SMURF1-204ENST00000480055 ADAM28Q9UKQ2 775 aa11.46□□□□□ -0.57
SMURF1-204ENST00000480055 FBXO4Q9UKT5 387 aa11.46□□□□□ -0.57
SMURF1-204ENST00000480055 GIT1Q9Y2X7 761 aa11.46□□□□□ -0.57
SMURF1-204ENST00000480055 ZFP37Q9Y6Q3 630 aaPredicted RBP11.46□□□□□ -0.57
SMURF1-204ENST00000480055 USP24Q9UPU5 2620 aa11.46□□□□□ -0.58
SMURF1-204ENST00000480055 CHD8Q9HCK8 2581 aa11.46□□□□□ -0.58
SMURF1-204ENST00000480055 GREB1Q4ZG55 1949 aa11.45□□□□□ -0.58
SMURF1-204ENST00000480055 TBX3O15119 743 aa11.45□□□□□ -0.58
SMURF1-204ENST00000480055 FSHRP23945 695 aa11.45□□□□□ -0.58
SMURF1-204ENST00000480055 NPY5RQ15761 445 aa11.45□□□□□ -0.58
SMURF1-204ENST00000480055 TMEM132AQ24JP5 1023 aa11.45□□□□□ -0.58
SMURF1-204ENST00000480055 FUT10Q6P4F1 479 aa11.45□□□□□ -0.58
SMURF1-204ENST00000480055 LILRA6Q6PI73 481 aa11.45□□□□□ -0.58
SMURF1-204ENST00000480055 CDR2LQ86X02 465 aaPredicted RBP11.45□□□□□ -0.58
SMURF1-204ENST00000480055 CEP57Q86XR8 500 aa11.45□□□□□ -0.58
SMURF1-204ENST00000480055 GPR65Q8IYL9 337 aa11.45□□□□□ -0.58
SMURF1-204ENST00000480055 GPR161Q8N6U8 529 aaKnown RBP11.45□□□□□ -0.58
SMURF1-204ENST00000480055 HAS1Q92839 578 aa11.45□□□□□ -0.58
SMURF1-204ENST00000480055 GPR62Q9BZJ7 368 aa11.45□□□□□ -0.58
SMURF1-204ENST00000480055 NXF3Q9H4D5 531 aaKnown RBP11.45□□□□□ -0.58
SMURF1-204ENST00000480055 FNIP2Q9P278 1114 aa11.45□□□□□ -0.58
SMURF1-204ENST00000480055 NCDNQ9UBB6 729 aa11.45□□□□□ -0.58
SMURF1-204ENST00000480055 POLIQ9UNA4 740 aa11.45□□□□□ -0.58
SMURF1-204ENST00000480055 PCDHGA2Q9Y5H1 932 aa11.45□□□□□ -0.58
SMURF1-204ENST00000480055 SPAG17Q6Q759 2223 aa11.44□□□□□ -0.58
SMURF1-204ENST00000480055 KANSL1LA0AUZ9 987 aa11.44□□□□□ -0.58
SMURF1-204ENST00000480055 DGAT1O75907 488 aa11.44□□□□□ -0.58
SMURF1-204ENST00000480055 SLITRK3O94933 977 aa11.44□□□□□ -0.58
SMURF1-204ENST00000480055 ARF4P18085 180 aaPredicted RBP11.44□□□□□ -0.58
SMURF1-204ENST00000480055 NDUFV2P19404 249 aa11.44□□□□□ -0.58
SMURF1-204ENST00000480055 SDHBP21912 280 aa11.44□□□□□ -0.58
SMURF1-204ENST00000480055 MAGEA9P43362 315 aa11.44□□□□□ -0.58
SMURF1-204ENST00000480055 GPC5P78333 572 aa11.44□□□□□ -0.58
SMURF1-204ENST00000480055 MBTD1Q05BQ5 628 aa11.44□□□□□ -0.58
SMURF1-204ENST00000480055 GRIK3Q13003 919 aa11.44□□□□□ -0.58
SMURF1-204ENST00000480055 CAPSQ13938 189 aa11.44□□□□□ -0.58
SMURF1-204ENST00000480055 MLF2Q15773 248 aaPredicted RBP11.44□□□□□ -0.58
SMURF1-204ENST00000480055 LIN9Q5TKA1 542 aa11.44□□□□□ -0.58
SMURF1-204ENST00000480055 SLC27A1Q6PCB7 646 aa11.44□□□□□ -0.58
SMURF1-204ENST00000480055 PRSS55Q6UWB4 352 aaPredicted RBP11.44□□□□□ -0.58
SMURF1-204ENST00000480055 MAEAQ7L5Y9 396 aa11.44□□□□□ -0.58
SMURF1-204ENST00000480055 GRASPQ7Z6J2 395 aaPredicted RBP11.44□□□□□ -0.58
SMURF1-204ENST00000480055 ASAP3Q8TDY4 903 aa11.44□□□□□ -0.58
SMURF1-204ENST00000480055 HASPINQ8TF76 798 aa11.44□□□□□ -0.58
SMURF1-204ENST00000480055 ZNF516Q92618 1163 aa11.44□□□□□ -0.58
SMURF1-204ENST00000480055 NELL1Q92832 810 aa11.44□□□□□ -0.58
SMURF1-204ENST00000480055 FGF14Q92915 247 aa11.44□□□□□ -0.58
SMURF1-204ENST00000480055 EIF2AK1Q9BQI3 630 aaKnown RBP11.44□□□□□ -0.58
SMURF1-204ENST00000480055 RPP25Q9BUL9 199 aaKnown RBP11.44□□□□□ -0.58
SMURF1-204ENST00000480055 BCO2Q9BYV7 579 aa11.44□□□□□ -0.58
SMURF1-204ENST00000480055 OSBPL6Q9BZF3 934 aa11.44□□□□□ -0.58
SMURF1-204ENST00000480055 XPNPEP1Q9NQW7 623 aa11.44□□□□□ -0.58
SMURF1-204ENST00000480055 PLA2G2EQ9NZK7 142 aa11.44□□□□□ -0.58
SMURF1-204ENST00000480055 PCDHA12Q9UN75 941 aa11.44□□□□□ -0.58
SMURF1-204ENST00000480055 SLC27A5Q9Y2P5 690 aa11.44□□□□□ -0.58
SMURF1-204ENST00000480055 ZMYM2Q9UBW7 1377 aa11.43□□□□□ -0.58
SMURF1-204ENST00000480055 F5P12259 2224 aa11.43□□□□□ -0.58
SMURF1-204ENST00000480055 SF3B1O75533 1304 aaKnown RBP eCLIP11.43□□□□□ -0.583e-15■■■■■ 344.6
SMURF1-204ENST00000480055 LRRIQ4A6NIV6 560 aa11.43□□□□□ -0.58
SMURF1-204ENST00000480055 B4GALT5O43286 388 aa11.43□□□□□ -0.58
SMURF1-204ENST00000480055 LAMTOR5O43504 91 aa11.43□□□□□ -0.58
SMURF1-204ENST00000480055 DTNBO60941 627 aa11.43□□□□□ -0.58
SMURF1-204ENST00000480055 LILRB5O75023 590 aa11.43□□□□□ -0.58
SMURF1-204ENST00000480055 ATXN1P54253 815 aaKnown RBP11.43□□□□□ -0.58
SMURF1-204ENST00000480055 PRKCQQ04759 706 aa11.43□□□□□ -0.58
SMURF1-204ENST00000480055 POU5F1BQ06416 359 aa11.43□□□□□ -0.58
SMURF1-204ENST00000480055 SCRN1Q12765 414 aa11.43□□□□□ -0.58
SMURF1-204ENST00000480055 HSP90AA2PQ14568 343 aaPredicted RBP11.43□□□□□ -0.58
SMURF1-204ENST00000480055 PPM1LQ5SGD2 360 aa11.43□□□□□ -0.58
SMURF1-204ENST00000480055 FAM171A1Q5VUB5 890 aa11.43□□□□□ -0.58
SMURF1-204ENST00000480055 PARM1Q6UWI2 310 aa11.43□□□□□ -0.58
SMURF1-204ENST00000480055 RSPO2Q6UXX9 243 aaPredicted RBP11.43□□□□□ -0.58
SMURF1-204ENST00000480055 ZBTB44Q8NCP5 570 aa11.43□□□□□ -0.58
SMURF1-204ENST00000480055 POLR3FQ9H1D9 316 aaPredicted RBP11.43□□□□□ -0.58
SMURF1-204ENST00000480055 EPC1Q9H2F5 836 aa11.43□□□□□ -0.58
SMURF1-204ENST00000480055 BRMS1Q9HCU9 246 aa11.43□□□□□ -0.58
SMURF1-204ENST00000480055 GJB4Q9NTQ9 266 aa11.43□□□□□ -0.58
SMURF1-204ENST00000480055 SPATA6Q9NWH7 488 aaPredicted RBP11.43□□□□□ -0.58
SMURF1-204ENST00000480055 CACNG4Q9UBN1 327 aa11.43□□□□□ -0.58
SMURF1-204ENST00000480055 FBXW11Q9UKB1 542 aa11.43□□□□□ -0.58
SMURF1-204ENST00000480055 CDH7Q9ULB5 785 aa11.43□□□□□ -0.58
SMURF1-204ENST00000480055 SMG5Q9UPR3 1016 aaKnown RBP11.43□□□□□ -0.58
SMURF1-204ENST00000480055 A0A087WWV3 80 aa11.42□□□□□ -0.58
SMURF1-204ENST00000480055 CASTOR2A6NHX0 329 aa11.42□□□□□ -0.58
SMURF1-204ENST00000480055 PRR5-ARHGAP8B1AHC4 643 aa11.42□□□□□ -0.58
SMURF1-204ENST00000480055 CCL16O15467 120 aa11.42□□□□□ -0.58
SMURF1-204ENST00000480055 XYLBO75191 536 aa11.42□□□□□ -0.58
SMURF1-204ENST00000480055 LIG1P18858 919 aa11.42□□□□□ -0.58
SMURF1-204ENST00000480055 GLRA2P23416 452 aa11.42□□□□□ -0.58
SMURF1-204ENST00000480055 KRT2P35908 639 aa11.42□□□□□ -0.58
SMURF1-204ENST00000480055 ARL2P36404 184 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms