RNA–Protein interactions for RNA: ENST00000477345.1

TPRN-203, Transcript of taperin, humanhuman

TSL 1 (best)

Gene TPRN, Length 3,350 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPRN-203ENST00000477345 ABCA3Q99758 1704 aa13.75□□□□□ -0.21
TPRN-203ENST00000477345 TISP43B9A030 160 aa13.75□□□□□ -0.21
TPRN-203ENST00000477345 LCA5LO95447 670 aa13.75□□□□□ -0.21
TPRN-203ENST00000477345 LDHCP07864 332 aa13.75□□□□□ -0.21
TPRN-203ENST00000477345 CA4P22748 312 aa13.75□□□□□ -0.21
TPRN-203ENST00000477345 CHKAP35790 457 aa13.75□□□□□ -0.21
TPRN-203ENST00000477345 AUHQ13825 339 aaKnown RBP13.75□□□□□ -0.21
TPRN-203ENST00000477345 ZFPM1Q8IX07 1006 aa13.75□□□□□ -0.21
TPRN-203ENST00000477345 SLC15A3Q8IY34 581 aa13.75□□□□□ -0.21
TPRN-203ENST00000477345 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.75□□□□□ -0.21
TPRN-203ENST00000477345 RBBP8NLQ8NC74 664 aaPredicted RBP13.75□□□□□ -0.21
TPRN-203ENST00000477345 LNX1Q8TBB1 728 aaPredicted RBP13.75□□□□□ -0.21
TPRN-203ENST00000477345 ATXN2LQ8WWM7 1075 aaKnown RBP13.75□□□□□ -0.21
TPRN-203ENST00000477345 JDP2Q8WYK2 163 aa13.75□□□□□ -0.21
TPRN-203ENST00000477345 MCUR1Q96AQ8 359 aa13.75□□□□□ -0.21
TPRN-203ENST00000477345 TRIM11Q96F44 468 aa13.75□□□□□ -0.21
TPRN-203ENST00000477345 RUSC1Q9BVN2 902 aa13.75□□□□□ -0.21
TPRN-203ENST00000477345 LRRC27Q9C0I9 530 aa13.75□□□□□ -0.21
TPRN-203ENST00000477345 NPHS2Q9NP85 383 aa13.75□□□□□ -0.21
TPRN-203ENST00000477345 COMMD3-BMI1R4GMX3 469 aa13.75□□□□□ -0.21
TPRN-203ENST00000477345 COL16A1Q07092 1604 aaPredicted RBP13.75□□□□□ -0.21
TPRN-203ENST00000477345 RASA1P20936 1047 aa13.75□□□□□ -0.21
TPRN-203ENST00000477345 NFIAQ12857 509 aa13.75□□□□□ -0.21
TPRN-203ENST00000477345 RC3H1Q5TC82 1133 aaKnown RBP13.75□□□□□ -0.21
TPRN-203ENST00000477345 VPS52Q8N1B4 723 aa13.75□□□□□ -0.21
TPRN-203ENST00000477345 DNAJC19Q96DA6 116 aa13.75□□□□□ -0.21
TPRN-203ENST00000477345 NAP1L3Q99457 506 aaPredicted RBP13.75□□□□□ -0.21
TPRN-203ENST00000477345 SPATA16Q9BXB7 569 aa13.75□□□□□ -0.21
TPRN-203ENST00000477345 GANQ9H2C0 597 aa13.75□□□□□ -0.21
TPRN-203ENST00000477345 ZNF180Q9UJW8 692 aa13.75□□□□□ -0.21
TPRN-203ENST00000477345 TRPC5Q9UL62 973 aaPredicted RBP13.75□□□□□ -0.21
TPRN-203ENST00000477345 MAGEA13PA6NCF6 341 aa13.74□□□□□ -0.21
TPRN-203ENST00000477345 P4HA2O15460 535 aa13.74□□□□□ -0.21
TPRN-203ENST00000477345 TROVE2P10155 538 aaKnown RBP eCLIP13.74□□□□□ -0.21
TPRN-203ENST00000477345 PYGMP11217 842 aa13.74□□□□□ -0.21
TPRN-203ENST00000477345 KRT17Q04695 432 aa13.74□□□□□ -0.21
TPRN-203ENST00000477345 LSAMPQ13449 338 aa13.74□□□□□ -0.21
TPRN-203ENST00000477345 GRAMD4Q6IC98 578 aa13.74□□□□□ -0.21
TPRN-203ENST00000477345 LLGL2Q6P1M3 1020 aa13.74□□□□□ -0.21
TPRN-203ENST00000477345 TRIM50Q86XT4 487 aa13.74□□□□□ -0.21
TPRN-203ENST00000477345 LRRC57Q8N9N7 239 aa13.74□□□□□ -0.21
TPRN-203ENST00000477345 CYP2W1Q8TAV3 490 aa13.74□□□□□ -0.21
TPRN-203ENST00000477345 KAT5Q92993 513 aa13.74□□□□□ -0.21
TPRN-203ENST00000477345 LENG1Q96BZ8 264 aaPredicted RBP13.74□□□□□ -0.21
TPRN-203ENST00000477345 LRRC37BQ96QE4 947 aa13.74□□□□□ -0.21
TPRN-203ENST00000477345 MKNK1Q9BUB5 465 aa13.74□□□□□ -0.21
TPRN-203ENST00000477345 MIS12Q9H081 205 aa13.74□□□□□ -0.21
TPRN-203ENST00000477345 CYP39A1Q9NYL5 469 aa13.74□□□□□ -0.21
TPRN-203ENST00000477345 ARL2BPQ9Y2Y0 163 aa13.74□□□□□ -0.21
TPRN-203ENST00000477345 PFASO15067 1338 aa13.74□□□□□ -0.21
TPRN-203ENST00000477345 ATRNO75882 1429 aa13.74□□□□□ -0.21
TPRN-203ENST00000477345 TMEM247A6NEH6 219 aa13.74□□□□□ -0.21
TPRN-203ENST00000477345 FOXN3O00409 490 aaPredicted RBP13.74□□□□□ -0.21
TPRN-203ENST00000477345 ATP9AO75110 1047 aa13.74□□□□□ -0.21
TPRN-203ENST00000477345 AKR1B1P15121 316 aa13.74□□□□□ -0.21
TPRN-203ENST00000477345 BNIP1Q12981 228 aa13.74□□□□□ -0.21
TPRN-203ENST00000477345 TTC27Q6P3X3 843 aa13.74□□□□□ -0.21
TPRN-203ENST00000477345 IQCF2Q8IXL9 164 aa13.74□□□□□ -0.21
TPRN-203ENST00000477345 ASAP3Q8TDY4 903 aa13.74□□□□□ -0.21
TPRN-203ENST00000477345 ATP8B4Q8TF62 1192 aa13.74□□□□□ -0.21
TPRN-203ENST00000477345 SIKE1Q9BRV8 207 aa13.74□□□□□ -0.21
TPRN-203ENST00000477345 MYLK2Q9H1R3 596 aa13.74□□□□□ -0.21
TPRN-203ENST00000477345 SUCLA2Q9P2R7 463 aaPredicted RBP13.74□□□□□ -0.21
TPRN-203ENST00000477345 PCDHA1Q9Y5I3 950 aa13.74□□□□□ -0.21
TPRN-203ENST00000477345 MYH1P12882 1939 aa13.74□□□□□ -0.21
TPRN-203ENST00000477345 MYH4Q9Y623 1939 aa13.74□□□□□ -0.21
TPRN-203ENST00000477345 MYO3BQ8WXR4 1341 aa13.74□□□□□ -0.21
TPRN-203ENST00000477345 PPEF1O14829 653 aaPredicted RBP13.74□□□□□ -0.21
TPRN-203ENST00000477345 KIAA0391O15091 583 aaKnown RBP13.74□□□□□ -0.21
TPRN-203ENST00000477345 RIPK2O43353 540 aa13.74□□□□□ -0.21
TPRN-203ENST00000477345 CALUO43852 315 aaPredicted RBP13.74□□□□□ -0.21
TPRN-203ENST00000477345 ZYXQ15942 572 aaKnown RBP13.74□□□□□ -0.21
TPRN-203ENST00000477345 KNOP1Q1ED39 458 aaKnown RBP13.74□□□□□ -0.21
TPRN-203ENST00000477345 HS2ST1Q7LGA3 356 aa13.74□□□□□ -0.21
TPRN-203ENST00000477345 RFFLQ8WZ73 363 aa13.74□□□□□ -0.21
TPRN-203ENST00000477345 PPP1R14BQ96C90 147 aa13.74□□□□□ -0.21
TPRN-203ENST00000477345 UBN1Q9NPG3 1134 aa13.74□□□□□ -0.21
TPRN-203ENST00000477345 SH3GLB2Q9NR46 395 aa13.74□□□□□ -0.21
TPRN-203ENST00000477345 PHLPP1O60346 1717 aa13.74□□□□□ -0.21
TPRN-203ENST00000477345 TXNDC9O14530 226 aa13.73□□□□□ -0.21
TPRN-203ENST00000477345 NDUFB5O43674 189 aa13.73□□□□□ -0.21
TPRN-203ENST00000477345 TJP3O95049 919 aa13.73□□□□□ -0.21
TPRN-203ENST00000477345 ITGA2BP08514 1039 aa13.73□□□□□ -0.21
TPRN-203ENST00000477345 BCRP11274 1271 aa13.73□□□□□ -0.21
TPRN-203ENST00000477345 CYP4X1Q8N118 509 aa13.73□□□□□ -0.21
TPRN-203ENST00000477345 PROM2Q8N271 834 aa13.73□□□□□ -0.21
TPRN-203ENST00000477345 CENPTQ96BT3 561 aa13.73□□□□□ -0.21
TPRN-203ENST00000477345 FAM136AQ96C01 138 aa13.73□□□□□ -0.21
TPRN-203ENST00000477345 DDX4Q9NQI0 724 aaKnown RBP13.73□□□□□ -0.21
TPRN-203ENST00000477345 FRMD4BQ9Y2L6 1034 aa13.73□□□□□ -0.21
TPRN-203ENST00000477345 PASKQ96RG2 1323 aa13.73□□□□□ -0.21
TPRN-203ENST00000477345 NHSL1Q5SYE7 1610 aa13.73□□□□□ -0.21
TPRN-203ENST00000477345 GDF11O95390 407 aa13.73□□□□□ -0.21
TPRN-203ENST00000477345 MMP13P45452 471 aa13.73□□□□□ -0.21
TPRN-203ENST00000477345 CLCN2P51788 898 aa13.73□□□□□ -0.21
TPRN-203ENST00000477345 GSTO1P78417 241 aa13.73□□□□□ -0.21
TPRN-203ENST00000477345 MTMR2Q13614 643 aa13.73□□□□□ -0.21
TPRN-203ENST00000477345 C10orf76Q5T2E6 689 aa13.73□□□□□ -0.21
TPRN-203ENST00000477345 TMEM53Q6P2H8 277 aa13.73□□□□□ -0.21
TPRN-203ENST00000477345 RNF207Q6ZRF8 634 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms