RNA–Protein interactions for RNA: ENST00000475482.5

CPSF3-203, Transcript of cleavage and polyadenylation specific factor 3, humanhuman

TSL 4

Gene CPSF3, Length 871 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF3-203ENST00000475482 PLA2G4BP0C869 781 aa17.08■□□□□ 0.32
CPSF3-203ENST00000475482 PPP1R2P41236 205 aa17.08■□□□□ 0.32
CPSF3-203ENST00000475482 OR1G1P47890 313 aa17.08■□□□□ 0.32
CPSF3-203ENST00000475482 TPM4P67936 248 aa17.08■□□□□ 0.32
CPSF3-203ENST00000475482 MORC3Q14149 939 aa17.08■□□□□ 0.32
CPSF3-203ENST00000475482 MCM6Q14566 821 aa17.08■□□□□ 0.32
CPSF3-203ENST00000475482 DCAF4L1Q3SXM0 396 aa17.08■□□□□ 0.32
CPSF3-203ENST00000475482 HERC4Q5GLZ8 1057 aaPredicted RBP17.08■□□□□ 0.32
CPSF3-203ENST00000475482 ATF7IP2Q5U623 682 aa17.08■□□□□ 0.32
CPSF3-203ENST00000475482 TAS1R1Q7RTX1 841 aa17.08■□□□□ 0.32
CPSF3-203ENST00000475482 PPFIBP1Q86W92 1011 aa17.08■□□□□ 0.32
CPSF3-203ENST00000475482 RNF135Q8IUD6 432 aa17.08■□□□□ 0.32
CPSF3-203ENST00000475482 LRRC15Q8TF66 581 aa17.08■□□□□ 0.32
CPSF3-203ENST00000475482 SPIRE2Q8WWL2 714 aa17.08■□□□□ 0.32
CPSF3-203ENST00000475482 ADPGKQ9BRR6 497 aa17.08■□□□□ 0.32
CPSF3-203ENST00000475482 TRIM9Q9C026 710 aa17.08■□□□□ 0.32
CPSF3-203ENST00000475482 DNAJC25Q9H1X3 360 aa17.08■□□□□ 0.32
CPSF3-203ENST00000475482 CXCL16Q9H2A7 254 aa17.08■□□□□ 0.32
CPSF3-203ENST00000475482 ADAM7Q9H2U9 754 aa17.08■□□□□ 0.32
CPSF3-203ENST00000475482 RXFP1Q9HBX9 757 aa17.08■□□□□ 0.32
CPSF3-203ENST00000475482 SNTG2Q9NY99 539 aa17.08■□□□□ 0.32
CPSF3-203ENST00000475482 CITO14578 2027 aa17.08■□□□□ 0.32
CPSF3-203ENST00000475482 ABLIM1O14639 778 aa17.07■□□□□ 0.32
CPSF3-203ENST00000475482 RECQL4O94761 1208 aa17.07■□□□□ 0.32
CPSF3-203ENST00000475482 EPCAMP16422 314 aa17.07■□□□□ 0.32
CPSF3-203ENST00000475482 PROZP22891 400 aa17.07■□□□□ 0.32
CPSF3-203ENST00000475482 CLCN4P51793 760 aa17.07■□□□□ 0.32
CPSF3-203ENST00000475482 ASIC1P78348 528 aa17.07■□□□□ 0.32
CPSF3-203ENST00000475482 DSG1Q02413 1049 aa17.07■□□□□ 0.32
CPSF3-203ENST00000475482 ITIH3Q06033 890 aa17.07■□□□□ 0.32
CPSF3-203ENST00000475482 DMP1Q13316 513 aaPredicted RBP17.07■□□□□ 0.32
CPSF3-203ENST00000475482 TUSC3Q13454 348 aa17.07■□□□□ 0.32
CPSF3-203ENST00000475482 CUL4BQ13620 913 aa17.07■□□□□ 0.32
CPSF3-203ENST00000475482 TMEM31Q5JXX7 168 aa17.07■□□□□ 0.32
CPSF3-203ENST00000475482 RNF214Q8ND24 703 aa17.07■□□□□ 0.32
CPSF3-203ENST00000475482 STAMQ92783 540 aa17.07■□□□□ 0.32
CPSF3-203ENST00000475482 RPS6KC1Q96S38 1066 aa17.07■□□□□ 0.32
CPSF3-203ENST00000475482 ACO2Q99798 780 aaKnown RBP17.07■□□□□ 0.32
CPSF3-203ENST00000475482 COLEC11Q9BWP8 271 aa17.07■□□□□ 0.32
CPSF3-203ENST00000475482 BLZF1Q9H2G9 400 aa17.07■□□□□ 0.32
CPSF3-203ENST00000475482 MRPL17Q9NRX2 175 aaKnown RBP17.07■□□□□ 0.32
CPSF3-203ENST00000475482 EXOC1Q9NV70 894 aa17.07■□□□□ 0.32
CPSF3-203ENST00000475482 DZANK1Q9NVP4 752 aa17.07■□□□□ 0.32
CPSF3-203ENST00000475482 PLXNA3P51805 1871 aa17.07■□□□□ 0.32
CPSF3-203ENST00000475482 CCDC169A6NNP5 214 aa17.06■□□□□ 0.32
CPSF3-203ENST00000475482 C1RP00736 705 aa17.06■□□□□ 0.32
CPSF3-203ENST00000475482 SSBP05455 408 aaKnown RBP eCLIP17.06■□□□□ 0.32
CPSF3-203ENST00000475482 PLS3P13797 630 aa17.06■□□□□ 0.32
CPSF3-203ENST00000475482 COL9A1P20849 921 aa17.06■□□□□ 0.32
CPSF3-203ENST00000475482 STIM1Q13586 685 aa17.06■□□□□ 0.32
CPSF3-203ENST00000475482 DHX8Q14562 1220 aaKnown RBP17.06■□□□□ 0.32
CPSF3-203ENST00000475482 DPCR1Q3MIW9 517 aa17.06■□□□□ 0.32
CPSF3-203ENST00000475482 ARSHQ5FYA8 562 aa17.06■□□□□ 0.32
CPSF3-203ENST00000475482 XKR4Q5GH76 650 aa17.06■□□□□ 0.32
CPSF3-203ENST00000475482 ZNF658Q5TYW1 1059 aaPredicted RBP17.06■□□□□ 0.32
CPSF3-203ENST00000475482 FUT10Q6P4F1 479 aa17.06■□□□□ 0.32
CPSF3-203ENST00000475482 PAAF1Q9BRP4 392 aa17.06■□□□□ 0.32
CPSF3-203ENST00000475482 EMILIN2Q9BXX0 1053 aa17.06■□□□□ 0.32
CPSF3-203ENST00000475482 GPR62Q9BZJ7 368 aa17.06■□□□□ 0.32
CPSF3-203ENST00000475482 KMT5AQ9NQR1 393 aa17.06■□□□□ 0.32
CPSF3-203ENST00000475482 KCNG1Q9UIX4 513 aa17.06■□□□□ 0.32
CPSF3-203ENST00000475482 SSX2IPQ9Y2D8 614 aa17.06■□□□□ 0.32
CPSF3-203ENST00000475482 VWA8A3KMH1 1905 aa17.06■□□□□ 0.32
CPSF3-203ENST00000475482 DENND4AQ7Z401 1863 aa17.05■□□□□ 0.32
CPSF3-203ENST00000475482 SFI1A8K8P3 1242 aa17.05■□□□□ 0.32
CPSF3-203ENST00000475482 RHOBTB3O94955 611 aa17.05■□□□□ 0.32
CPSF3-203ENST00000475482 PAPLNO95428 1278 aa17.05■□□□□ 0.32
CPSF3-203ENST00000475482 KRT18P05783 430 aaKnown RBP17.05■□□□□ 0.32
CPSF3-203ENST00000475482 URODP06132 367 aa17.05■□□□□ 0.32
CPSF3-203ENST00000475482 THP07101 528 aa17.05■□□□□ 0.32
CPSF3-203ENST00000475482 GLUD2P49448 558 aa17.05■□□□□ 0.32
CPSF3-203ENST00000475482 PSMD2Q13200 908 aa17.05■□□□□ 0.32
CPSF3-203ENST00000475482 ALKAL1Q6UXT8 129 aa17.05■□□□□ 0.32
CPSF3-203ENST00000475482 UNC13DQ70J99 1090 aa17.05■□□□□ 0.32
CPSF3-203ENST00000475482 CCDC65Q8IXS2 484 aa17.05■□□□□ 0.32
CPSF3-203ENST00000475482 TMEM161BQ8NDZ6 487 aa17.05■□□□□ 0.32
CPSF3-203ENST00000475482 DDX12PQ92771 950 aa17.05■□□□□ 0.32
CPSF3-203ENST00000475482 NECTIN4Q96NY8 510 aa17.05■□□□□ 0.32
CPSF3-203ENST00000475482 MRPL4Q9BYD3 311 aaKnown RBP17.05■□□□□ 0.32
CPSF3-203ENST00000475482 CDT1Q9H211 546 aa17.05■□□□□ 0.32
CPSF3-203ENST00000475482 CBX8Q9HC52 389 aa17.05■□□□□ 0.32
CPSF3-203ENST00000475482 ADAM28Q9UKQ2 775 aa17.05■□□□□ 0.32
CPSF3-203ENST00000475482 C2orf16Q68DN1 1984 aa17.05■□□□□ 0.32
CPSF3-203ENST00000475482 SLC16A4O15374 487 aa17.04■□□□□ 0.32
CPSF3-203ENST00000475482 TEX28O15482 410 aa17.04■□□□□ 0.32
CPSF3-203ENST00000475482 ERCC5P28715 1186 aaPredicted RBP17.04■□□□□ 0.32
CPSF3-203ENST00000475482 CA8P35219 290 aa17.04■□□□□ 0.32
CPSF3-203ENST00000475482 GRM5P41594 1212 aa17.04■□□□□ 0.32
CPSF3-203ENST00000475482 HSP90AA2PQ14568 343 aaPredicted RBP17.04■□□□□ 0.32
CPSF3-203ENST00000475482 TMEM132AQ24JP5 1023 aa17.04■□□□□ 0.32
CPSF3-203ENST00000475482 ISM2Q6H9L7 571 aa17.04■□□□□ 0.32
CPSF3-203ENST00000475482 C11orf57Q6ZUT1 292 aaPredicted RBP17.04■□□□□ 0.32
CPSF3-203ENST00000475482 GPBP1Q86WP2 473 aa17.04■□□□□ 0.32
CPSF3-203ENST00000475482 FBXL18Q96ME1 805 aa17.04■□□□□ 0.32
CPSF3-203ENST00000475482 PPP1R10Q96QC0 940 aaKnown RBP17.04■□□□□ 0.32
CPSF3-203ENST00000475482 TARS2Q9BW92 718 aaKnown RBP17.04■□□□□ 0.32
CPSF3-203ENST00000475482 APOL5Q9BWW9 433 aa17.04■□□□□ 0.32
CPSF3-203ENST00000475482 CACNG4Q9UBN1 327 aa17.04■□□□□ 0.32
CPSF3-203ENST00000475482 MUTYHQ9UIF7 546 aa17.04■□□□□ 0.32
CPSF3-203ENST00000475482 CDH22Q9UJ99 828 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms