RNA–Protein interactions for RNA: ENST00000474734.5

CACFD1-204, Transcript of calcium channel flower domain containing 1, humanhuman

TSL 2

Gene CACFD1, Length 689 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACFD1-204ENST00000474734 MKNK1Q9BUB5 465 aa20.13■□□□□ 0.81
CACFD1-204ENST00000474734 HAPLN2Q9GZV7 340 aa20.13■□□□□ 0.81
CACFD1-204ENST00000474734 PCIF1Q9H4Z3 704 aa20.13■□□□□ 0.81
CACFD1-204ENST00000474734 ELAC1Q9H777 363 aaKnown RBP20.13■□□□□ 0.81
CACFD1-204ENST00000474734 FRMD4BQ9Y2L6 1034 aa20.13■□□□□ 0.81
CACFD1-204ENST00000474734 SMTNL1A8MU46 457 aa20.12■□□□□ 0.81
CACFD1-204ENST00000474734 MAPK13O15264 365 aa20.12■□□□□ 0.81
CACFD1-204ENST00000474734 GRM6O15303 877 aa20.12■□□□□ 0.81
CACFD1-204ENST00000474734 CLTAP09496 248 aa20.12■□□□□ 0.81
CACFD1-204ENST00000474734 YARSP54577 528 aaKnown RBP20.12■□□□□ 0.81
CACFD1-204ENST00000474734 COL19A1Q14993 1142 aa20.12■□□□□ 0.81
CACFD1-204ENST00000474734 SPATA1Q5VX52 437 aa20.12■□□□□ 0.81
CACFD1-204ENST00000474734 ECHDC2Q86YB7 292 aa20.12■□□□□ 0.81
CACFD1-204ENST00000474734 THNSL1Q8IYQ7 743 aa20.12■□□□□ 0.81
CACFD1-204ENST00000474734 ACAP3Q96P50 834 aa20.12■□□□□ 0.81
CACFD1-204ENST00000474734 DUSP9Q99956 384 aaKnown RBP20.12■□□□□ 0.81
CACFD1-204ENST00000474734 LMAN2LQ9H0V9 348 aa20.12■□□□□ 0.81
CACFD1-204ENST00000474734 UBN1Q9NPG3 1134 aa20.12■□□□□ 0.81
CACFD1-204ENST00000474734 TOPORSQ9NS56 1045 aaPredicted RBP20.12■□□□□ 0.81
CACFD1-204ENST00000474734 ZNF233A6NK53 670 aa20.11■□□□□ 0.81
CACFD1-204ENST00000474734 BECN2A8MW95 431 aa20.11■□□□□ 0.81
CACFD1-204ENST00000474734 PRR33A8MZF0 331 aa20.11■□□□□ 0.81
CACFD1-204ENST00000474734 IKBKBO14920 756 aa20.11■□□□□ 0.81
CACFD1-204ENST00000474734 SLC16A3O15427 465 aaKnown RBP20.11■□□□□ 0.81
CACFD1-204ENST00000474734 FAM189A1O60320 539 aa20.11■□□□□ 0.81
CACFD1-204ENST00000474734 CSPG5O95196 566 aa20.11■□□□□ 0.81
CACFD1-204ENST00000474734 GNA14O95837 355 aa20.11■□□□□ 0.81
CACFD1-204ENST00000474734 STAG3L1P0CL83 205 aa20.11■□□□□ 0.81
CACFD1-204ENST00000474734 EPB41P11171 864 aaKnown RBP20.11■□□□□ 0.81
CACFD1-204ENST00000474734 ITGA4P13612 1032 aa20.11■□□□□ 0.81
CACFD1-204ENST00000474734 HOXD11P31277 338 aaPredicted RBP20.11■□□□□ 0.81
CACFD1-204ENST00000474734 PSMC2P35998 433 aaKnown RBP20.11■□□□□ 0.81
CACFD1-204ENST00000474734 CEP135Q66GS9 1140 aa20.11■□□□□ 0.81
CACFD1-204ENST00000474734 LRRC55Q6ZSA7 311 aa20.11■□□□□ 0.81
CACFD1-204ENST00000474734 FAM114A1Q8IWE2 563 aa20.11■□□□□ 0.81
CACFD1-204ENST00000474734 SMG8Q8ND04 991 aaKnown RBP20.11■□□□□ 0.81
CACFD1-204ENST00000474734 FAM200AQ8TCP9 573 aa20.11■□□□□ 0.81
CACFD1-204ENST00000474734 RSPH1Q8WYR4 309 aa20.11■□□□□ 0.81
CACFD1-204ENST00000474734 CLP1Q92989 425 aaKnown RBP20.11■□□□□ 0.81
CACFD1-204ENST00000474734 SAAL1Q96ER3 474 aa20.11■□□□□ 0.81
CACFD1-204ENST00000474734 FAM213AQ9BRX8 229 aa20.11■□□□□ 0.81
CACFD1-204ENST00000474734 NXF3Q9H4D5 531 aaKnown RBP20.11■□□□□ 0.81
CACFD1-204ENST00000474734 TMEM161AQ9NX61 479 aa20.11■□□□□ 0.81
CACFD1-204ENST00000474734 LRFN2Q9ULH4 789 aa20.11■□□□□ 0.81
CACFD1-204ENST00000474734 MUC6Q6W4X9 2439 aa20.1■□□□□ 0.81
CACFD1-204ENST00000474734 HOXA2O43364 376 aa20.1■□□□□ 0.81
CACFD1-204ENST00000474734 DGKIO75912 1065 aa20.1■□□□□ 0.81
CACFD1-204ENST00000474734 SURF1Q15526 300 aa20.1■□□□□ 0.81
CACFD1-204ENST00000474734 SNRNP35Q16560 246 aaKnown RBP20.1■□□□□ 0.81
CACFD1-204ENST00000474734 FILIP1Q7Z7B0 1213 aa20.1■□□□□ 0.81
CACFD1-204ENST00000474734 USP37Q86T82 979 aa20.1■□□□□ 0.81
CACFD1-204ENST00000474734 NPAS4Q8IUM7 802 aa20.1■□□□□ 0.81
CACFD1-204ENST00000474734 CD302Q8IX05 232 aa20.1■□□□□ 0.81
CACFD1-204ENST00000474734 SRRTQ9BXP5 876 aaKnown RBP20.1■□□□□ 0.81
CACFD1-204ENST00000474734 THAP9Q9H5L6 903 aa20.1■□□□□ 0.81
CACFD1-204ENST00000474734 RPF1Q9H9Y2 349 aaKnown RBP20.1■□□□□ 0.81
CACFD1-204ENST00000474734 SNTG2Q9NY99 539 aa20.1■□□□□ 0.81
CACFD1-204ENST00000474734 PRKAG3Q9UGI9 489 aa20.1■□□□□ 0.81
CACFD1-204ENST00000474734 CPSF3Q9UKF6 684 aaKnown RBP20.1■□□□□ 0.81
CACFD1-204ENST00000474734 GIT1Q9Y2X7 761 aa20.1■□□□□ 0.81
CACFD1-204ENST00000474734 NFE2L3Q9Y4A8 694 aa20.1■□□□□ 0.81
CACFD1-204ENST00000474734 PCDHB7Q9Y5E2 793 aa20.1■□□□□ 0.81
CACFD1-204ENST00000474734 TTC3P53804 2025 aa20.1■□□□□ 0.81
CACFD1-204ENST00000474734 GOLGA8IPA6NC78 632 aa20.09■□□□□ 0.81
CACFD1-204ENST00000474734 GOLGA8JA6NMD2 632 aa20.09■□□□□ 0.81
CACFD1-204ENST00000474734 LTBRP36941 435 aa20.09■□□□□ 0.81
CACFD1-204ENST00000474734 ACOT2P49753 483 aa20.09■□□□□ 0.81
CACFD1-204ENST00000474734 ZP2Q05996 745 aa20.09■□□□□ 0.81
CACFD1-204ENST00000474734 ENPEPQ07075 957 aa20.09■□□□□ 0.81
CACFD1-204ENST00000474734 HYAL1Q12794 435 aa20.09■□□□□ 0.81
CACFD1-204ENST00000474734 CLUL1Q15846 466 aa20.09■□□□□ 0.81
CACFD1-204ENST00000474734 ZNF598Q86UK7 904 aaKnown RBP20.09■□□□□ 0.81
CACFD1-204ENST00000474734 BRSK2Q8IWQ3 736 aa20.09■□□□□ 0.81
CACFD1-204ENST00000474734 FAM186BQ8IYM0 893 aa20.09■□□□□ 0.81
CACFD1-204ENST00000474734 AOPEPQ8N6M6 819 aa20.09■□□□□ 0.81
CACFD1-204ENST00000474734 CEP120Q8N960 986 aa20.09■□□□□ 0.81
CACFD1-204ENST00000474734 MED15Q96RN5 788 aa20.09■□□□□ 0.81
CACFD1-204ENST00000474734 IGFLR1Q9H665 355 aa20.09■□□□□ 0.81
CACFD1-204ENST00000474734 PLEKHA5Q9HAU0 1116 aa20.09■□□□□ 0.81
CACFD1-204ENST00000474734 METTL14Q9HCE5 456 aaKnown RBP20.09■□□□□ 0.81
CACFD1-204ENST00000474734 RBAKQ9NYW8 714 aaPredicted RBP20.09■□□□□ 0.81
CACFD1-204ENST00000474734 PARP2Q9UGN5 583 aa20.09■□□□□ 0.81
CACFD1-204ENST00000474734 DCXO43602 365 aa20.08■□□□□ 0.81
CACFD1-204ENST00000474734 RECQL4O94761 1208 aa20.08■□□□□ 0.81
CACFD1-204ENST00000474734 IL18RAPO95256 599 aa20.08■□□□□ 0.81
CACFD1-204ENST00000474734 ATF7P17544 494 aaPredicted RBP20.08■□□□□ 0.81
CACFD1-204ENST00000474734 GATMP50440 423 aa20.08■□□□□ 0.81
CACFD1-204ENST00000474734 OSTNP61366 133 aa20.08■□□□□ 0.81
CACFD1-204ENST00000474734 TPM4P67936 248 aa20.08■□□□□ 0.81
CACFD1-204ENST00000474734 PPP2R3AQ06190 1150 aa20.08■□□□□ 0.81
CACFD1-204ENST00000474734 CTC1Q2NKJ3 1217 aa20.08■□□□□ 0.81
CACFD1-204ENST00000474734 CRELD2Q6UXH1 353 aaPredicted RBP20.08■□□□□ 0.81
CACFD1-204ENST00000474734 INTS8Q75QN2 995 aaKnown RBP20.08■□□□□ 0.81
CACFD1-204ENST00000474734 CBWD2Q8IUF1 395 aa20.08■□□□□ 0.81
CACFD1-204ENST00000474734 ADHFE1Q8IWW8 467 aa20.08■□□□□ 0.81
CACFD1-204ENST00000474734 RNF169Q8NCN4 708 aa20.08■□□□□ 0.81
CACFD1-204ENST00000474734 TSPAN18Q96SJ8 248 aa20.08■□□□□ 0.81
CACFD1-204ENST00000474734 APOL6Q9BWW8 343 aa20.08■□□□□ 0.81
CACFD1-204ENST00000474734 PLVAPQ9BX97 442 aa20.08■□□□□ 0.81
CACFD1-204ENST00000474734 RSAD1Q9HA92 442 aa20.08■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms