RNA–Protein interactions for RNA: ENST00000474067.5

SNX13-206, Transcript of sorting nexin 13, humanhuman

TSL 3

Gene SNX13, Length 603 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-206ENST00000474067 OTOP3Q7RTS5 596 aa22.36■■□□□ 1.17
SNX13-206ENST00000474067 TAS1R1Q7RTX1 841 aa22.36■■□□□ 1.17
SNX13-206ENST00000474067 CUEDC2Q9H467 287 aa22.36■■□□□ 1.17
SNX13-206ENST00000474067 CFAP45Q9UL16 551 aa22.36■■□□□ 1.17
SNX13-206ENST00000474067 NUB1Q9Y5A7 615 aa22.36■■□□□ 1.17
SNX13-206ENST00000474067 NPHP3-ACAD11A0A0J9YXS1 232 aa22.35■■□□□ 1.17
SNX13-206ENST00000474067 SPTLC2O15270 562 aa22.35■■□□□ 1.17
SNX13-206ENST00000474067 PAX3P23760 479 aa22.35■■□□□ 1.17
SNX13-206ENST00000474067 AMPD3Q01432 767 aa22.35■■□□□ 1.17
SNX13-206ENST00000474067 PSMD5Q16401 504 aa22.35■■□□□ 1.17
SNX13-206ENST00000474067 UPP1Q16831 310 aa22.35■■□□□ 1.17
SNX13-206ENST00000474067 LIN9Q5TKA1 542 aa22.35■■□□□ 1.17
SNX13-206ENST00000474067 TMC5Q6UXY8 1006 aa22.35■■□□□ 1.17
SNX13-206ENST00000474067 STXBP4Q6ZWJ1 553 aa22.35■■□□□ 1.17
SNX13-206ENST00000474067 CEP120Q8N960 986 aa22.35■■□□□ 1.17
SNX13-206ENST00000474067 HASPINQ8TF76 798 aa22.35■■□□□ 1.17
SNX13-206ENST00000474067 EDAQ92838 391 aa22.35■■□□□ 1.17
SNX13-206ENST00000474067 PYM1Q9BRP8 204 aaKnown RBP22.35■■□□□ 1.17
SNX13-206ENST00000474067 LRFN3Q9BTN0 628 aa22.35■■□□□ 1.17
SNX13-206ENST00000474067 POMKQ9H5K3 350 aa22.35■■□□□ 1.17
SNX13-206ENST00000474067 TSHZ2Q9NRE2 1034 aa22.35■■□□□ 1.17
SNX13-206ENST00000474067 ARIH1Q9Y4X5 557 aaPredicted RBP22.35■■□□□ 1.17
SNX13-206ENST00000474067 OGTO15294 1046 aa22.34■■□□□ 1.17
SNX13-206ENST00000474067 COL9A1P20849 921 aa22.34■■□□□ 1.17
SNX13-206ENST00000474067 CLCNKBP51801 687 aa22.34■■□□□ 1.17
SNX13-206ENST00000474067 GTF2BQ00403 316 aa22.34■■□□□ 1.17
SNX13-206ENST00000474067 POSTNQ15063 836 aa22.34■■□□□ 1.17
SNX13-206ENST00000474067 FAM173BQ6P4H8 233 aa22.34■■□□□ 1.17
SNX13-206ENST00000474067 LINC00301Q8NCQ3 95 aa22.34■■□□□ 1.17
SNX13-206ENST00000474067 KCNG4Q8TDN1 519 aa22.34■■□□□ 1.17
SNX13-206ENST00000474067 DDX12PQ92771 950 aa22.34■■□□□ 1.17
SNX13-206ENST00000474067 RPF1Q9H9Y2 349 aaKnown RBP22.34■■□□□ 1.17
SNX13-206ENST00000474067 PIDD1Q9HB75 910 aa22.34■■□□□ 1.17
SNX13-206ENST00000474067 MUTYHQ9UIF7 546 aa22.34■■□□□ 1.17
SNX13-206ENST00000474067 CITO14578 2027 aa22.33■■□□□ 1.17
SNX13-206ENST00000474067 H7C4K7 107 aa22.33■■□□□ 1.17
SNX13-206ENST00000474067 PODXLO00592 558 aa22.33■■□□□ 1.17
SNX13-206ENST00000474067 ABLIM1O14639 778 aa22.33■■□□□ 1.17
SNX13-206ENST00000474067 SYN3O14994 580 aa22.33■■□□□ 1.17
SNX13-206ENST00000474067 ZSCAN22P10073 491 aaPredicted RBP22.33■■□□□ 1.17
SNX13-206ENST00000474067 POU5F1Q01860 360 aaKnown RBP22.33■■□□□ 1.17
SNX13-206ENST00000474067 SPECC1Q5M775 1068 aa22.33■■□□□ 1.17
SNX13-206ENST00000474067 MAP4K3Q8IVH8 894 aa22.33■■□□□ 1.17
SNX13-206ENST00000474067 ZDHHC14Q8IZN3 488 aa22.33■■□□□ 1.17
SNX13-206ENST00000474067 KHSRPQ92945 711 aaKnown RBP eCLIP22.33■■□□□ 1.171e-6■■■□□ 16.2
SNX13-206ENST00000474067 PAAF1Q9BRP4 392 aa22.33■■□□□ 1.17
SNX13-206ENST00000474067 UBQLN1Q9UMX0 589 aaKnown RBP22.33■■□□□ 1.17
SNX13-206ENST00000474067 CCDC195A0A1B0GUA6 201 aa22.32■■□□□ 1.16
SNX13-206ENST00000474067 ARHGEF37A1IGU5 675 aa22.32■■□□□ 1.16
SNX13-206ENST00000474067 F8W810 466 aa22.32■■□□□ 1.16
SNX13-206ENST00000474067 TGM5O43548 720 aa22.32■■□□□ 1.16
SNX13-206ENST00000474067 CUTAO60888 179 aa22.32■■□□□ 1.16
SNX13-206ENST00000474067 CYP3A5P20815 502 aa22.32■■□□□ 1.16
SNX13-206ENST00000474067 FGFR3P22607 806 aa22.32■■□□□ 1.16
SNX13-206ENST00000474067 PTPN21Q16825 1174 aa22.32■■□□□ 1.16
SNX13-206ENST00000474067 RTP2Q5QGT7 225 aa22.32■■□□□ 1.16
SNX13-206ENST00000474067 PALB2Q86YC2 1186 aa22.32■■□□□ 1.16
SNX13-206ENST00000474067 CCDC65Q8IXS2 484 aa22.32■■□□□ 1.16
SNX13-206ENST00000474067 UBALD2Q8IYN6 164 aa22.32■■□□□ 1.16
SNX13-206ENST00000474067 C12orf76Q8N812 135 aaPredicted RBP22.32■■□□□ 1.16
SNX13-206ENST00000474067 KREMEN2Q8NCW0 462 aa22.32■■□□□ 1.16
SNX13-206ENST00000474067 RABGGTAQ92696 567 aa22.32■■□□□ 1.16
SNX13-206ENST00000474067 MFSD14AQ96MC6 490 aa22.32■■□□□ 1.16
SNX13-206ENST00000474067 CLIC6Q96NY7 704 aa22.32■■□□□ 1.16
SNX13-206ENST00000474067 MSTO1Q9BUK6 570 aa22.32■■□□□ 1.16
SNX13-206ENST00000474067 OXCT2Q9BYC2 517 aaPredicted RBP22.32■■□□□ 1.16
SNX13-206ENST00000474067 TNMDQ9H2S6 317 aa22.32■■□□□ 1.16
SNX13-206ENST00000474067 MRPL44Q9H9J2 332 aaKnown RBP22.32■■□□□ 1.16
SNX13-206ENST00000474067 MAGEF1Q9HAY2 307 aa22.32■■□□□ 1.16
SNX13-206ENST00000474067 PCDHB13Q9Y5F0 798 aa22.32■■□□□ 1.16
SNX13-206ENST00000474067 BACE2Q9Y5Z0 518 aa22.32■■□□□ 1.16
SNX13-206ENST00000474067 BDP1A6H8Y1 2624 aa22.32■■□□□ 1.16
SNX13-206ENST00000474067 F13A1P00488 732 aa22.31■■□□□ 1.16
SNX13-206ENST00000474067 HNRNPA1P09651 372 aaKnown RBP eCLIP22.31■■□□□ 1.16
SNX13-206ENST00000474067 HOXA9P31269 272 aa22.31■■□□□ 1.16
SNX13-206ENST00000474067 MTMR3Q13615 1198 aa22.31■■□□□ 1.16
SNX13-206ENST00000474067 UVSSAQ2YD98 709 aa22.31■■□□□ 1.16
SNX13-206ENST00000474067 DYMQ7RTS9 669 aa22.31■■□□□ 1.16
SNX13-206ENST00000474067 APPL2Q8NEU8 664 aa22.31■■□□□ 1.16
SNX13-206ENST00000474067 LNX1Q8TBB1 728 aaPredicted RBP22.31■■□□□ 1.16
SNX13-206ENST00000474067 ZBTB45Q96K62 511 aaPredicted RBP22.31■■□□□ 1.16
SNX13-206ENST00000474067 OLFML3Q9NRN5 406 aa22.31■■□□□ 1.16
SNX13-206ENST00000474067 MTRRQ9UBK8 725 aa22.31■■□□□ 1.16
SNX13-206ENST00000474067 XYLBO75191 536 aa22.3■■□□□ 1.16
SNX13-206ENST00000474067 IDEP14735 1019 aa22.3■■□□□ 1.16
SNX13-206ENST00000474067 ZXDAP98168 799 aa22.3■■□□□ 1.16
SNX13-206ENST00000474067 SLC10A6Q3KNW5 377 aa22.3■■□□□ 1.16
SNX13-206ENST00000474067 USP49Q70CQ1 688 aa22.3■■□□□ 1.16
SNX13-206ENST00000474067 ZNF720Q7Z2F6 126 aa22.3■■□□□ 1.16
SNX13-206ENST00000474067 IQUBQ8NA54 791 aa22.3■■□□□ 1.16
SNX13-206ENST00000474067 SMG7Q92540 1137 aaKnown RBP22.3■■□□□ 1.16
SNX13-206ENST00000474067 KIF12Q96FN5 646 aa22.3■■□□□ 1.16
SNX13-206ENST00000474067 B3GALT6Q96L58 329 aa22.3■■□□□ 1.16
SNX13-206ENST00000474067 FAM13BQ9NYF5 915 aa22.3■■□□□ 1.16
SNX13-206ENST00000474067 SORCS3Q9UPU3 1222 aa22.3■■□□□ 1.16
SNX13-206ENST00000474067 DERAQ9Y315 318 aa22.3■■□□□ 1.16
SNX13-206ENST00000474067 MYH15Q9Y2K3 1946 aa22.29■■□□□ 1.16
SNX13-206ENST00000474067 A0A0B4J269 797 aa22.29■■□□□ 1.16
SNX13-206ENST00000474067 ZMYND10O75800 440 aa22.29■■□□□ 1.16
SNX13-206ENST00000474067 PAPLNO95428 1278 aa22.29■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms