RNA–Protein interactions for RNA: ENST00000473373.1

CPNE1-222, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 821 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-222ENST00000473373 YEATS4O95619 227 aa12.58□□□□□ -0.4
CPNE1-222ENST00000473373 WEE2P0C1S8 567 aa12.58□□□□□ -0.4
CPNE1-222ENST00000473373 GAP43P17677 238 aa12.58□□□□□ -0.4
CPNE1-222ENST00000473373 NMT1P30419 496 aaKnown RBP12.58□□□□□ -0.4
CPNE1-222ENST00000473373 NASPP49321 788 aaPredicted RBP12.58□□□□□ -0.4
CPNE1-222ENST00000473373 DSG1Q02413 1049 aa12.58□□□□□ -0.4
CPNE1-222ENST00000473373 KYAT1Q16773 422 aa12.58□□□□□ -0.4
CPNE1-222ENST00000473373 ATAT1Q5SQI0 421 aa12.58□□□□□ -0.4
CPNE1-222ENST00000473373 PDXDC1Q6P996 788 aa12.58□□□□□ -0.4
CPNE1-222ENST00000473373 TMC5Q6UXY8 1006 aa12.58□□□□□ -0.4
CPNE1-222ENST00000473373 TMEM184AQ6ZMB5 413 aa12.58□□□□□ -0.4
CPNE1-222ENST00000473373 SFR1Q86XK3 245 aa12.58□□□□□ -0.4
CPNE1-222ENST00000473373 SYCP3Q8IZU3 236 aa12.58□□□□□ -0.4
CPNE1-222ENST00000473373 LINC00301Q8NCQ3 95 aa12.58□□□□□ -0.4
CPNE1-222ENST00000473373 KCNG4Q8TDN1 519 aa12.58□□□□□ -0.4
CPNE1-222ENST00000473373 DHX58Q96C10 678 aa12.58□□□□□ -0.4
CPNE1-222ENST00000473373 SNX27Q96L92 541 aa12.58□□□□□ -0.4
CPNE1-222ENST00000473373 NECTIN4Q96NY8 510 aa12.58□□□□□ -0.4
CPNE1-222ENST00000473373 TTPALQ9BTX7 342 aa12.58□□□□□ -0.4
CPNE1-222ENST00000473373 MSTO1Q9BUK6 570 aa12.58□□□□□ -0.4
CPNE1-222ENST00000473373 GPR62Q9BZJ7 368 aa12.58□□□□□ -0.4
CPNE1-222ENST00000473373 RPF1Q9H9Y2 349 aaKnown RBP12.58□□□□□ -0.4
CPNE1-222ENST00000473373 GOLGA2P5Q9HBQ8 144 aa12.58□□□□□ -0.4
CPNE1-222ENST00000473373 MAN1C1Q9NR34 630 aa12.58□□□□□ -0.4
CPNE1-222ENST00000473373 EXOC7Q9UPT5 735 aa12.58□□□□□ -0.4
CPNE1-222ENST00000473373 SMIM28A0A1B0GU29 152 aa12.57□□□□□ -0.4
CPNE1-222ENST00000473373 TEX28O15482 410 aa12.57□□□□□ -0.4
CPNE1-222ENST00000473373 CUTAO60888 179 aa12.57□□□□□ -0.4
CPNE1-222ENST00000473373 CLTAP09496 248 aa12.57□□□□□ -0.4
CPNE1-222ENST00000473373 SPATA31D3P0C874 917 aa12.57□□□□□ -0.4
CPNE1-222ENST00000473373 CXCL8P10145 99 aa12.57□□□□□ -0.4
CPNE1-222ENST00000473373 RPL17P18621 184 aaKnown RBP12.57□□□□□ -0.4
CPNE1-222ENST00000473373 MCM4P33991 863 aa12.57□□□□□ -0.4
CPNE1-222ENST00000473373 CLCN4P51793 760 aa12.57□□□□□ -0.4
CPNE1-222ENST00000473373 CLCNKBP51801 687 aa12.57□□□□□ -0.4
CPNE1-222ENST00000473373 AMPD3Q01432 767 aa12.57□□□□□ -0.4
CPNE1-222ENST00000473373 PSMD5Q16401 504 aa12.57□□□□□ -0.4
CPNE1-222ENST00000473373 HERC4Q5GLZ8 1057 aaPredicted RBP12.57□□□□□ -0.4
CPNE1-222ENST00000473373 SYCE2Q6PIF2 218 aa12.57□□□□□ -0.4
CPNE1-222ENST00000473373 DCLRE1AQ6PJP8 1040 aa12.57□□□□□ -0.4
CPNE1-222ENST00000473373 PRSS55Q6UWB4 352 aaPredicted RBP12.57□□□□□ -0.4
CPNE1-222ENST00000473373 SPATA31D4Q6ZUB0 917 aa12.57□□□□□ -0.4
CPNE1-222ENST00000473373 STXBP4Q6ZWJ1 553 aa12.57□□□□□ -0.4
CPNE1-222ENST00000473373 RNF135Q8IUD6 432 aa12.57□□□□□ -0.4
CPNE1-222ENST00000473373 CCDC65Q8IXS2 484 aa12.57□□□□□ -0.4
CPNE1-222ENST00000473373 KIF12Q96FN5 646 aa12.57□□□□□ -0.4
CPNE1-222ENST00000473373 DDX27Q96GQ7 796 aaKnown RBP12.57□□□□□ -0.4
CPNE1-222ENST00000473373 MFSD14AQ96MC6 490 aa12.57□□□□□ -0.4
CPNE1-222ENST00000473373 PPP1R10Q96QC0 940 aaKnown RBP12.57□□□□□ -0.4
CPNE1-222ENST00000473373 PHOX2BQ99453 314 aa12.57□□□□□ -0.4
CPNE1-222ENST00000473373 KCNH6Q9H252 994 aa12.57□□□□□ -0.4
CPNE1-222ENST00000473373 CXCL16Q9H2A7 254 aa12.57□□□□□ -0.4
CPNE1-222ENST00000473373 ADAM7Q9H2U9 754 aa12.57□□□□□ -0.4
CPNE1-222ENST00000473373 PANK4Q9NVE7 773 aa12.57□□□□□ -0.4
CPNE1-222ENST00000473373 DENND4AQ7Z401 1863 aa12.57□□□□□ -0.4
CPNE1-222ENST00000473373 PIEZO1Q92508 2521 aa12.56□□□□□ -0.4
CPNE1-222ENST00000473373 PODXLO00592 558 aa12.56□□□□□ -0.4
CPNE1-222ENST00000473373 OGTO15294 1046 aa12.56□□□□□ -0.4
CPNE1-222ENST00000473373 PROZP22891 400 aa12.56□□□□□ -0.4
CPNE1-222ENST00000473373 ZNF131P52739 623 aa12.56□□□□□ -0.4
CPNE1-222ENST00000473373 ASIC1P78348 528 aa12.56□□□□□ -0.4
CPNE1-222ENST00000473373 SPAG1Q07617 926 aa12.56□□□□□ -0.4
CPNE1-222ENST00000473373 MCL1Q07820 350 aa12.56□□□□□ -0.4
CPNE1-222ENST00000473373 ZC2HC1CQ53FD0 456 aaPredicted RBP12.56□□□□□ -0.4
CPNE1-222ENST00000473373 LIN9Q5TKA1 542 aa12.56□□□□□ -0.4
CPNE1-222ENST00000473373 ADALQ6DHV7 355 aa12.56□□□□□ -0.4
CPNE1-222ENST00000473373 SLFN12LQ6IEE8 588 aa12.56□□□□□ -0.4
CPNE1-222ENST00000473373 CCDC149Q6ZUS6 474 aa12.56□□□□□ -0.4
CPNE1-222ENST00000473373 TDRD5Q8NAT2 981 aaKnown RBP12.56□□□□□ -0.4
CPNE1-222ENST00000473373 LRRC15Q8TF66 581 aa12.56□□□□□ -0.4
CPNE1-222ENST00000473373 SLC22A17Q8WUG5 538 aa12.56□□□□□ -0.4
CPNE1-222ENST00000473373 POMGNT1Q8WZA1 660 aa12.56□□□□□ -0.4
CPNE1-222ENST00000473373 STAMQ92783 540 aa12.56□□□□□ -0.4
CPNE1-222ENST00000473373 PTPRHQ9HD43 1115 aa12.56□□□□□ -0.4
CPNE1-222ENST00000473373 SEL1LQ9UBV2 794 aa12.56□□□□□ -0.4
CPNE1-222ENST00000473373 POLIQ9UNA4 740 aa12.56□□□□□ -0.4
CPNE1-222ENST00000473373 MYMKA6NI61 221 aa12.55□□□□□ -0.4
CPNE1-222ENST00000473373 I3L4J1 428 aa12.55□□□□□ -0.4
CPNE1-222ENST00000473373 BRCC3P46736 316 aa12.55□□□□□ -0.4
CPNE1-222ENST00000473373 ARPP19P56211 112 aa12.55□□□□□ -0.4
CPNE1-222ENST00000473373 KRT85P78386 507 aa12.55□□□□□ -0.4
CPNE1-222ENST00000473373 DNM1Q05193 864 aaKnown RBP12.55□□□□□ -0.4
CPNE1-222ENST00000473373 KCNC3Q14003 757 aa12.55□□□□□ -0.4
CPNE1-222ENST00000473373 RTP2Q5QGT7 225 aa12.55□□□□□ -0.4
CPNE1-222ENST00000473373 KIAA0319Q5VV43 1072 aa12.55□□□□□ -0.4
CPNE1-222ENST00000473373 ATL3Q6DD88 541 aa12.55□□□□□ -0.4
CPNE1-222ENST00000473373 KANK3Q6NY19 840 aa12.55□□□□□ -0.4
CPNE1-222ENST00000473373 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.55□□□□□ -0.4
CPNE1-222ENST00000473373 CEP57L1Q8IYX8 460 aa12.55□□□□□ -0.4
CPNE1-222ENST00000473373 IQUBQ8NA54 791 aa12.55□□□□□ -0.4
CPNE1-222ENST00000473373 EDAQ92838 391 aa12.55□□□□□ -0.4
CPNE1-222ENST00000473373 ACSF2Q96CM8 615 aaPredicted RBP12.55□□□□□ -0.4
CPNE1-222ENST00000473373 HVCN1Q96D96 273 aa12.55□□□□□ -0.4
CPNE1-222ENST00000473373 ACCSQ96QU6 501 aa12.55□□□□□ -0.4
CPNE1-222ENST00000473373 S1PR5Q9H228 398 aa12.55□□□□□ -0.4
CPNE1-222ENST00000473373 CUEDC2Q9H467 287 aa12.55□□□□□ -0.4
CPNE1-222ENST00000473373 POMKQ9H5K3 350 aa12.55□□□□□ -0.4
CPNE1-222ENST00000473373 CNTN3Q9P232 1028 aa12.55□□□□□ -0.4
CPNE1-222ENST00000473373 CDH22Q9UJ99 828 aa12.55□□□□□ -0.4
CPNE1-222ENST00000473373 PCDHB13Q9Y5F0 798 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms