RNA–Protein interactions for RNA: ENST00000473344.1

CKS1B-205, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 3

Gene CKS1B, Length 390 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-205ENST00000473344 TTPALQ9BTX7 342 aa7.66□□□□□ -1.18
CKS1B-205ENST00000473344 PHF20Q9BVI0 1012 aa7.66□□□□□ -1.18
CKS1B-205ENST00000473344 NFKBIZQ9BYH8 718 aa7.66□□□□□ -1.18
CKS1B-205ENST00000473344 UPF2Q9HAU5 1272 aaKnown RBP7.66□□□□□ -1.18
CKS1B-205ENST00000473344 KLK14Q9P0G3 267 aa7.66□□□□□ -1.18
CKS1B-205ENST00000473344 DLGAP2Q9P1A6 1054 aa7.66□□□□□ -1.18
CKS1B-205ENST00000473344 NCDNQ9UBB6 729 aa7.66□□□□□ -1.18
CKS1B-205ENST00000473344 CDH7Q9ULB5 785 aa7.66□□□□□ -1.18
CKS1B-205ENST00000473344 PCDHA12Q9UN75 941 aa7.66□□□□□ -1.18
CKS1B-205ENST00000473344 A0A1B0GUA9 196 aa7.65□□□□□ -1.18
CKS1B-205ENST00000473344 MED19A0JLT2 244 aaPredicted RBP7.65□□□□□ -1.18
CKS1B-205ENST00000473344 CASTOR2A6NHX0 329 aa7.65□□□□□ -1.18
CKS1B-205ENST00000473344 LRRIQ4A6NIV6 560 aa7.65□□□□□ -1.18
CKS1B-205ENST00000473344 NCAM2O15394 837 aa7.65□□□□□ -1.18
CKS1B-205ENST00000473344 B4GALT5O43286 388 aa7.65□□□□□ -1.18
CKS1B-205ENST00000473344 ZNF292O60281 2723 aa7.65□□□□□ -1.18
CKS1B-205ENST00000473344 SLITRK3O94933 977 aa7.65□□□□□ -1.18
CKS1B-205ENST00000473344 PAPLNO95428 1278 aa7.65□□□□□ -1.18
CKS1B-205ENST00000473344 THP07101 528 aa7.65□□□□□ -1.18
CKS1B-205ENST00000473344 SDHBP21912 280 aa7.65□□□□□ -1.18
CKS1B-205ENST00000473344 PRKCQQ04759 706 aa7.65□□□□□ -1.18
CKS1B-205ENST00000473344 ELAVL2Q12926 359 aaKnown RBP7.65□□□□□ -1.18
CKS1B-205ENST00000473344 TUSC3Q13454 348 aa7.65□□□□□ -1.18
CKS1B-205ENST00000473344 NPY5RQ15761 445 aa7.65□□□□□ -1.18
CKS1B-205ENST00000473344 MLF2Q15773 248 aaPredicted RBP7.65□□□□□ -1.18
CKS1B-205ENST00000473344 PSMD5Q16401 504 aa7.65□□□□□ -1.18
CKS1B-205ENST00000473344 AMHR2Q16671 573 aa7.65□□□□□ -1.18
CKS1B-205ENST00000473344 SLC44A4Q53GD3 710 aa7.65□□□□□ -1.18
CKS1B-205ENST00000473344 FAM171A1Q5VUB5 890 aa7.65□□□□□ -1.18
CKS1B-205ENST00000473344 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.65□□□□□ -1.18
CKS1B-205ENST00000473344 ZBTB8OSQ8IWT0 167 aa7.65□□□□□ -1.18
CKS1B-205ENST00000473344 DCLK2Q8N568 766 aa7.65□□□□□ -1.18
CKS1B-205ENST00000473344 GPR161Q8N6U8 529 aaKnown RBP7.65□□□□□ -1.18
CKS1B-205ENST00000473344 GSTCDQ8NEC7 633 aa7.65□□□□□ -1.18
CKS1B-205ENST00000473344 ATRIPQ8WXE1 791 aa7.65□□□□□ -1.18
CKS1B-205ENST00000473344 HAS1Q92839 578 aa7.65□□□□□ -1.18
CKS1B-205ENST00000473344 FGF13Q92913 245 aa7.65□□□□□ -1.18
CKS1B-205ENST00000473344 EIF2AK1Q9BQI3 630 aaKnown RBP7.65□□□□□ -1.18
CKS1B-205ENST00000473344 BRMS1Q9HCU9 246 aa7.65□□□□□ -1.18
CKS1B-205ENST00000473344 ANKEF1Q9NU02 776 aa7.65□□□□□ -1.18
CKS1B-205ENST00000473344 PRMT7Q9NVM4 692 aaPredicted RBP7.65□□□□□ -1.18
CKS1B-205ENST00000473344 FBXW11Q9UKB1 542 aa7.65□□□□□ -1.18
CKS1B-205ENST00000473344 FBXO4Q9UKT5 387 aa7.65□□□□□ -1.18
CKS1B-205ENST00000473344 CACNA1HO95180 2353 aa7.64□□□□□ -1.19
CKS1B-205ENST00000473344 ZMYM2Q9UBW7 1377 aa7.64□□□□□ -1.19
CKS1B-205ENST00000473344 FAM170BA6NMN3 283 aa7.64□□□□□ -1.19
CKS1B-205ENST00000473344 SPTLC1O15269 473 aa7.64□□□□□ -1.19
CKS1B-205ENST00000473344 CCL16O15467 120 aa7.64□□□□□ -1.19
CKS1B-205ENST00000473344 USO1O60763 962 aaKnown RBP7.64□□□□□ -1.19
CKS1B-205ENST00000473344 LRRN2O75325 713 aa7.64□□□□□ -1.19
CKS1B-205ENST00000473344 KIF4AO95239 1232 aa7.64□□□□□ -1.19
CKS1B-205ENST00000473344 GLULP15104 373 aa7.64□□□□□ -1.19
CKS1B-205ENST00000473344 GLRA2P23416 452 aa7.64□□□□□ -1.19
CKS1B-205ENST00000473344 HOXA9P31269 272 aa7.64□□□□□ -1.19
CKS1B-205ENST00000473344 KRT2P35908 639 aa7.64□□□□□ -1.19
CKS1B-205ENST00000473344 ARL2P36404 184 aa7.64□□□□□ -1.19
CKS1B-205ENST00000473344 TXKP42681 527 aa7.64□□□□□ -1.19
CKS1B-205ENST00000473344 MAGEA9P43362 315 aa7.64□□□□□ -1.19
CKS1B-205ENST00000473344 RARRES1P49788 294 aa7.64□□□□□ -1.19
CKS1B-205ENST00000473344 NTHL1P78549 312 aa7.64□□□□□ -1.19
CKS1B-205ENST00000473344 CSTF1Q05048 431 aaKnown RBP7.64□□□□□ -1.19
CKS1B-205ENST00000473344 SPIRE1Q08AE8 756 aa7.64□□□□□ -1.19
CKS1B-205ENST00000473344 CALCRLQ16602 461 aa7.64□□□□□ -1.19
CKS1B-205ENST00000473344 ZNF528Q3MIS6 628 aa7.64□□□□□ -1.19
CKS1B-205ENST00000473344 KMT5BQ4FZB7 885 aa7.64□□□□□ -1.19
CKS1B-205ENST00000473344 PABPC1LQ4VXU2 614 aaKnown RBP7.64□□□□□ -1.19
CKS1B-205ENST00000473344 ZBTB41Q5SVQ8 909 aa7.64□□□□□ -1.19
CKS1B-205ENST00000473344 AXDND1Q5T1B0 1012 aaPredicted RBP7.64□□□□□ -1.19
CKS1B-205ENST00000473344 MAEAQ7L5Y9 396 aa7.64□□□□□ -1.19
CKS1B-205ENST00000473344 LNX1Q8TBB1 728 aaPredicted RBP7.64□□□□□ -1.19
CKS1B-205ENST00000473344 SLC7A14Q8TBB6 771 aa7.64□□□□□ -1.19
CKS1B-205ENST00000473344 ASAP3Q8TDY4 903 aa7.64□□□□□ -1.19
CKS1B-205ENST00000473344 PIGOQ8TEQ8 1089 aa7.64□□□□□ -1.19
CKS1B-205ENST00000473344 PIK3R5Q8WYR1 880 aa7.64□□□□□ -1.19
CKS1B-205ENST00000473344 WASF1Q92558 559 aa7.64□□□□□ -1.19
CKS1B-205ENST00000473344 PRIMPOLQ96LW4 560 aa7.64□□□□□ -1.19
CKS1B-205ENST00000473344 NELL2Q99435 816 aa7.64□□□□□ -1.19
CKS1B-205ENST00000473344 CLSTN3Q9BQT9 956 aa7.64□□□□□ -1.19
CKS1B-205ENST00000473344 PAAF1Q9BRP4 392 aa7.64□□□□□ -1.19
CKS1B-205ENST00000473344 ADPGKQ9BRR6 497 aa7.64□□□□□ -1.19
CKS1B-205ENST00000473344 RPP25Q9BUL9 199 aaKnown RBP7.64□□□□□ -1.19
CKS1B-205ENST00000473344 POLR3FQ9H1D9 316 aaPredicted RBP7.64□□□□□ -1.19
CKS1B-205ENST00000473344 TTC12Q9H892 705 aaPredicted RBP7.64□□□□□ -1.19
CKS1B-205ENST00000473344 XPNPEP1Q9NQW7 623 aa7.64□□□□□ -1.19
CKS1B-205ENST00000473344 PDRG1Q9NUG6 133 aa7.64□□□□□ -1.19
CKS1B-205ENST00000473344 DLL3Q9NYJ7 618 aa7.64□□□□□ -1.19
CKS1B-205ENST00000473344 CACNG4Q9UBN1 327 aa7.64□□□□□ -1.19
CKS1B-205ENST00000473344 PCDHGA2Q9Y5H1 932 aa7.64□□□□□ -1.19
CKS1B-205ENST00000473344 SPTBN4Q9H254 2564 aa7.64□□□□□ -1.19
CKS1B-205ENST00000473344 STK36Q9NRP7 1315 aa7.63□□□□□ -1.19
CKS1B-205ENST00000473344 N4BP3O15049 544 aa7.63□□□□□ -1.19
CKS1B-205ENST00000473344 EPB41L2O43491 1005 aaKnown RBP7.63□□□□□ -1.19
CKS1B-205ENST00000473344 TRAPPC3O43617 180 aa7.63□□□□□ -1.19
CKS1B-205ENST00000473344 NEMFO60524 1076 aa7.63□□□□□ -1.19
CKS1B-205ENST00000473344 B3GAT3O94766 335 aa7.63□□□□□ -1.19
CKS1B-205ENST00000473344 LYPLA2O95372 231 aa7.63□□□□□ -1.19
CKS1B-205ENST00000473344 LIG1P18858 919 aa7.63□□□□□ -1.19
CKS1B-205ENST00000473344 ATP2B1P20020 1258 aa7.63□□□□□ -1.19
CKS1B-205ENST00000473344 CD72P21854 359 aa7.63□□□□□ -1.19
CKS1B-205ENST00000473344 OR1D2P34982 312 aa7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms