RNA–Protein interactions for RNA: ENST00000472928.5

HDAC1-205, Transcript of histone deacetylase 1, humanhuman

TSL 2

Gene HDAC1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-205ENST00000472928 PNMA5Q96PV4 448 aa7.04□□□□□ -1.28
HDAC1-205ENST00000472928 PCYT2Q99447 389 aa7.04□□□□□ -1.28
HDAC1-205ENST00000472928 RIT2Q99578 217 aa7.04□□□□□ -1.28
HDAC1-205ENST00000472928 TCF25Q9BQ70 676 aa7.04□□□□□ -1.28
HDAC1-205ENST00000472928 SENP7Q9BQF6 1050 aa7.04□□□□□ -1.28
HDAC1-205ENST00000472928 RBSNQ9H1K0 784 aa7.04□□□□□ -1.28
HDAC1-205ENST00000472928 DNAJC25Q9H1X3 360 aa7.04□□□□□ -1.28
HDAC1-205ENST00000472928 UNC45AQ9H3U1 944 aa7.04□□□□□ -1.28
HDAC1-205ENST00000472928 MFSD1Q9H3U5 465 aa7.04□□□□□ -1.28
HDAC1-205ENST00000472928 CUEDC2Q9H467 287 aa7.04□□□□□ -1.28
HDAC1-205ENST00000472928 CWH43Q9H720 699 aa7.04□□□□□ -1.28
HDAC1-205ENST00000472928 GRPEL1Q9HAV7 217 aa7.04□□□□□ -1.28
HDAC1-205ENST00000472928 ETNK1Q9HBU6 452 aa7.04□□□□□ -1.28
HDAC1-205ENST00000472928 AGO4Q9HCK5 861 aaKnown RBP7.04□□□□□ -1.28
HDAC1-205ENST00000472928 KCNH7Q9NS40 1196 aa7.04□□□□□ -1.28
HDAC1-205ENST00000472928 TYW1Q9NV66 732 aaKnown RBP7.04□□□□□ -1.28
HDAC1-205ENST00000472928 ANO10Q9NW15 660 aa7.04□□□□□ -1.28
HDAC1-205ENST00000472928 EGFL7Q9UHF1 273 aa7.04□□□□□ -1.28
HDAC1-205ENST00000472928 LZTS1Q9Y250 596 aa7.04□□□□□ -1.28
HDAC1-205ENST00000472928 TRPV2Q9Y5S1 764 aa7.04□□□□□ -1.28
HDAC1-205ENST00000472928 IGF2RP11717 2491 aa7.03□□□□□ -1.28
HDAC1-205ENST00000472928 C9IYK1 514 aa7.03□□□□□ -1.28
HDAC1-205ENST00000472928 EML1O00423 815 aa7.03□□□□□ -1.28
HDAC1-205ENST00000472928 ATP9AO75110 1047 aa7.03□□□□□ -1.28
HDAC1-205ENST00000472928 MED24O75448 989 aa7.03□□□□□ -1.28
HDAC1-205ENST00000472928 STAM2O75886 525 aa7.03□□□□□ -1.28
HDAC1-205ENST00000472928 SSBP05455 408 aaKnown RBP eCLIP7.03□□□□□ -1.28
HDAC1-205ENST00000472928 INSRRP14616 1297 aa7.03□□□□□ -1.28
HDAC1-205ENST00000472928 KCNA2P16389 499 aa7.03□□□□□ -1.28
HDAC1-205ENST00000472928 IBSPP21815 317 aaPredicted RBP7.03□□□□□ -1.28
HDAC1-205ENST00000472928 NLRP12P59046 1061 aa7.03□□□□□ -1.28
HDAC1-205ENST00000472928 IGBP1P78318 339 aa7.03□□□□□ -1.28
HDAC1-205ENST00000472928 ITIH3Q06033 890 aa7.03□□□□□ -1.28
HDAC1-205ENST00000472928 PAK2Q13177 524 aa7.03□□□□□ -1.28
HDAC1-205ENST00000472928 MMRN1Q13201 1228 aa7.03□□□□□ -1.28
HDAC1-205ENST00000472928 DHX8Q14562 1220 aaKnown RBP7.03□□□□□ -1.28
HDAC1-205ENST00000472928 PUM1Q14671 1186 aaKnown RBP eCLIP7.03□□□□□ -1.284e-7■■■■■ 29.1
HDAC1-205ENST00000472928 ECM1Q16610 540 aa7.03□□□□□ -1.28
HDAC1-205ENST00000472928 DPCR1Q3MIW9 517 aa7.03□□□□□ -1.28
HDAC1-205ENST00000472928 HYIQ5T013 277 aa7.03□□□□□ -1.28
HDAC1-205ENST00000472928 SPOUT1Q5T280 376 aaKnown RBP7.03□□□□□ -1.28
HDAC1-205ENST00000472928 IER5Q5VY09 327 aa7.03□□□□□ -1.28
HDAC1-205ENST00000472928 LRRC55Q6ZSA7 311 aa7.03□□□□□ -1.28
HDAC1-205ENST00000472928 MIER3Q7Z3K6 550 aa7.03□□□□□ -1.28
HDAC1-205ENST00000472928 KCNK18Q7Z418 384 aa7.03□□□□□ -1.28
HDAC1-205ENST00000472928 ELOA2Q8IYF1 753 aaPredicted RBP7.03□□□□□ -1.28
HDAC1-205ENST00000472928 TDRD5Q8NAT2 981 aaKnown RBP7.03□□□□□ -1.28
HDAC1-205ENST00000472928 LARP4BQ92615 738 aaKnown RBP7.03□□□□□ -1.28
HDAC1-205ENST00000472928 RAD54LQ92698 747 aa7.03□□□□□ -1.28
HDAC1-205ENST00000472928 CASP10Q92851 521 aa7.03□□□□□ -1.28
HDAC1-205ENST00000472928 CDHR1Q96JP9 859 aa7.03□□□□□ -1.28
HDAC1-205ENST00000472928 EIF2AK1Q9BQI3 630 aaKnown RBP7.03□□□□□ -1.28
HDAC1-205ENST00000472928 NT5C3AQ9H0P0 336 aa7.03□□□□□ -1.28
HDAC1-205ENST00000472928 BLZF1Q9H2G9 400 aa7.03□□□□□ -1.28
HDAC1-205ENST00000472928 ERVK-5Q9HDB9 667 aa7.03□□□□□ -1.28
HDAC1-205ENST00000472928 NGRNQ9NPE2 291 aaKnown RBP7.03□□□□□ -1.28
HDAC1-205ENST00000472928 RRAGDQ9NQL2 400 aaPredicted RBP7.03□□□□□ -1.28
HDAC1-205ENST00000472928 ENTPD7Q9NQZ7 604 aa7.03□□□□□ -1.28
HDAC1-205ENST00000472928 AAASQ9NRG9 546 aa7.03□□□□□ -1.28
HDAC1-205ENST00000472928 BLOC1S4Q9NUP1 217 aa7.03□□□□□ -1.28
HDAC1-205ENST00000472928 RNF19AQ9NV58 838 aa7.03□□□□□ -1.28
HDAC1-205ENST00000472928 ERAP1Q9NZ08 941 aa7.03□□□□□ -1.28
HDAC1-205ENST00000472928 MAN1B1Q9UKM7 699 aa7.03□□□□□ -1.28
HDAC1-205ENST00000472928 LRFN2Q9ULH4 789 aa7.03□□□□□ -1.28
HDAC1-205ENST00000472928 PCDHA5Q9Y5H7 936 aa7.03□□□□□ -1.28
HDAC1-205ENST00000472928 HCFC2Q9Y5Z7 792 aa7.03□□□□□ -1.28
HDAC1-205ENST00000472928 R4GN57 208 aa7.03□□□□□ -1.28
HDAC1-205ENST00000472928 FANCMQ8IYD8 2048 aa7.03□□□□□ -1.28
HDAC1-205ENST00000472928 C2orf71A6NGG8 1288 aa7.02□□□□□ -1.29
HDAC1-205ENST00000472928 WDR64B1ANS9 1081 aa7.02□□□□□ -1.29
HDAC1-205ENST00000472928 BACH1O14867 736 aa7.02□□□□□ -1.29
HDAC1-205ENST00000472928 CLASP2O75122 1294 aaKnown RBP7.02□□□□□ -1.29
HDAC1-205ENST00000472928 FGFR1P11362 822 aa7.02□□□□□ -1.29
HDAC1-205ENST00000472928 LAG3P18627 525 aa7.02□□□□□ -1.29
HDAC1-205ENST00000472928 RPA1P27694 616 aa7.02□□□□□ -1.29
HDAC1-205ENST00000472928 PBX3P40426 434 aa7.02□□□□□ -1.29
HDAC1-205ENST00000472928 MTHFRP42898 656 aa7.02□□□□□ -1.29
HDAC1-205ENST00000472928 JAK3P52333 1124 aa7.02□□□□□ -1.29
HDAC1-205ENST00000472928 ASIC1P78348 528 aa7.02□□□□□ -1.29
HDAC1-205ENST00000472928 KRT76Q01546 638 aa7.02□□□□□ -1.29
HDAC1-205ENST00000472928 CUL4BQ13620 913 aa7.02□□□□□ -1.29
HDAC1-205ENST00000472928 ISM2Q6H9L7 571 aa7.02□□□□□ -1.29
HDAC1-205ENST00000472928 KIAA1841Q6NSI8 718 aa7.02□□□□□ -1.29
HDAC1-205ENST00000472928 CES5AQ6NT32 575 aa7.02□□□□□ -1.29
HDAC1-205ENST00000472928 DCLK2Q8N568 766 aa7.02□□□□□ -1.29
HDAC1-205ENST00000472928 AOPEPQ8N6M6 819 aa7.02□□□□□ -1.29
HDAC1-205ENST00000472928 C12orf76Q8N812 135 aaPredicted RBP7.02□□□□□ -1.29
HDAC1-205ENST00000472928 TRAPPC12Q8WVT3 735 aa7.02□□□□□ -1.29
HDAC1-205ENST00000472928 TMEM40Q8WWA1 233 aa7.02□□□□□ -1.29
HDAC1-205ENST00000472928 SEPT1Q8WYJ6 367 aa7.02□□□□□ -1.29
HDAC1-205ENST00000472928 DYDC2Q96IM9 177 aa7.02□□□□□ -1.29
HDAC1-205ENST00000472928 RTP3Q9BQQ7 232 aa7.02□□□□□ -1.29
HDAC1-205ENST00000472928 LXNQ9BS40 222 aa7.02□□□□□ -1.29
HDAC1-205ENST00000472928 MKNK1Q9BUB5 465 aa7.02□□□□□ -1.29
HDAC1-205ENST00000472928 POLR3CQ9BUI4 534 aaPredicted RBP7.02□□□□□ -1.29
HDAC1-205ENST00000472928 CELF4Q9BZC1 486 aaKnown RBP7.02□□□□□ -1.29
HDAC1-205ENST00000472928 SEMA4AQ9H3S1 761 aa7.02□□□□□ -1.29
HDAC1-205ENST00000472928 TUFT1Q9NNX1 390 aa7.02□□□□□ -1.29
HDAC1-205ENST00000472928 RGS18Q9NS28 235 aa7.02□□□□□ -1.29
HDAC1-205ENST00000472928 TBC1D22BQ9NU19 505 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms