RNA–Protein interactions for RNA: ENST00000472479.1

UBE2F-220, Transcript of ubiquitin conjugating enzyme E2 F (putative), humanhuman

TSL 2

Gene UBE2F, Length 1,458 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2F-220ENST00000472479 MEIS3P2A8K0S8 358 aa11.39□□□□□ -0.59
UBE2F-220ENST00000472479 CBFA2T2O43439 604 aa11.39□□□□□ -0.59
UBE2F-220ENST00000472479 OFD1O75665 1012 aa11.39□□□□□ -0.59
UBE2F-220ENST00000472479 GCLMP48507 274 aa11.39□□□□□ -0.59
UBE2F-220ENST00000472479 AP3M2P53677 418 aa11.39□□□□□ -0.59
UBE2F-220ENST00000472479 DLG4P78352 724 aa11.39□□□□□ -0.59
UBE2F-220ENST00000472479 DEFB103AP81534 67 aa11.39□□□□□ -0.59
UBE2F-220ENST00000472479 FANCCQ00597 558 aa11.39□□□□□ -0.59
UBE2F-220ENST00000472479 KCNH2Q12809 1159 aa11.39□□□□□ -0.59
UBE2F-220ENST00000472479 KRT31Q15323 416 aa11.39□□□□□ -0.59
UBE2F-220ENST00000472479 UVSSAQ2YD98 709 aa11.39□□□□□ -0.59
UBE2F-220ENST00000472479 VWA3BQ502W6 1294 aa11.39□□□□□ -0.59
UBE2F-220ENST00000472479 PARD3BQ8TEW8 1205 aa11.39□□□□□ -0.59
UBE2F-220ENST00000472479 TMEM174Q8WUU8 243 aa11.39□□□□□ -0.59
UBE2F-220ENST00000472479 HERVK_113Q902F9 699 aa11.39□□□□□ -0.59
UBE2F-220ENST00000472479 ANP32BQ92688 251 aaKnown RBP11.39□□□□□ -0.59
UBE2F-220ENST00000472479 ZFP42Q96MM3 310 aa11.39□□□□□ -0.59
UBE2F-220ENST00000472479 CGRRF1Q99675 332 aa11.39□□□□□ -0.59
UBE2F-220ENST00000472479 UBQLN1Q9UMX0 589 aaKnown RBP11.39□□□□□ -0.59
UBE2F-220ENST00000472479 DNAH12Q6ZR08 3092 aa11.39□□□□□ -0.59
UBE2F-220ENST00000472479 BRCA2P51587 3418 aa11.39□□□□□ -0.59
UBE2F-220ENST00000472479 SMIM28A0A1B0GU29 152 aa11.38□□□□□ -0.59
UBE2F-220ENST00000472479 TTC26A0AVF1 554 aa11.38□□□□□ -0.59
UBE2F-220ENST00000472479 LRRIQ3A6PVS8 624 aaPredicted RBP11.38□□□□□ -0.59
UBE2F-220ENST00000472479 N4BP1O75113 896 aaKnown RBP11.38□□□□□ -0.59
UBE2F-220ENST00000472479 ATP1A3P13637 1013 aa11.38□□□□□ -0.59
UBE2F-220ENST00000472479 ATP2A2P16615 1042 aaKnown RBP11.38□□□□□ -0.59
UBE2F-220ENST00000472479 COPB1P53618 953 aaKnown RBP11.38□□□□□ -0.59
UBE2F-220ENST00000472479 UBASH3AP57075 661 aa11.38□□□□□ -0.59
UBE2F-220ENST00000472479 UBXN1Q04323 297 aa11.38□□□□□ -0.59
UBE2F-220ENST00000472479 BTG3Q14201 252 aaPredicted RBP11.38□□□□□ -0.59
UBE2F-220ENST00000472479 GSE1Q14687 1217 aa11.38□□□□□ -0.59
UBE2F-220ENST00000472479 CDKAL1Q5VV42 579 aa11.38□□□□□ -0.59
UBE2F-220ENST00000472479 TMCO2Q7Z6W1 182 aaPredicted RBP11.38□□□□□ -0.59
UBE2F-220ENST00000472479 NT5DC4Q86YG4 428 aa11.38□□□□□ -0.59
UBE2F-220ENST00000472479 IRF2BP1Q8IU81 584 aa11.38□□□□□ -0.59
UBE2F-220ENST00000472479 WDR49Q8IV35 697 aa11.38□□□□□ -0.59
UBE2F-220ENST00000472479 TOP1MTQ969P6 601 aa11.38□□□□□ -0.59
UBE2F-220ENST00000472479 TSPAN18Q96SJ8 248 aa11.38□□□□□ -0.59
UBE2F-220ENST00000472479 SLC9A7Q96T83 725 aa11.38□□□□□ -0.59
UBE2F-220ENST00000472479 MRPL9Q9BYD2 267 aaKnown RBP11.38□□□□□ -0.59
UBE2F-220ENST00000472479 TRIM5Q9C035 493 aa11.38□□□□□ -0.59
UBE2F-220ENST00000472479 TMEM117Q9H0C3 514 aa11.38□□□□□ -0.59
UBE2F-220ENST00000472479 NDST4Q9H3R1 872 aa11.38□□□□□ -0.59
UBE2F-220ENST00000472479 INTS13Q9NVM9 706 aa11.38□□□□□ -0.59
UBE2F-220ENST00000472479 DPP3Q9NY33 737 aa11.38□□□□□ -0.59
UBE2F-220ENST00000472479 LIMA1Q9UHB6 759 aaKnown RBP11.38□□□□□ -0.59
UBE2F-220ENST00000472479 TLL1O43897 1013 aa11.38□□□□□ -0.59
UBE2F-220ENST00000472479 FAM189A1O60320 539 aa11.38□□□□□ -0.59
UBE2F-220ENST00000472479 NFICP08651 508 aa11.38□□□□□ -0.59
UBE2F-220ENST00000472479 KCNE1P15382 129 aa11.38□□□□□ -0.59
UBE2F-220ENST00000472479 ATF7P17544 494 aaPredicted RBP11.38□□□□□ -0.59
UBE2F-220ENST00000472479 GTF2H1P32780 548 aa11.38□□□□□ -0.59
UBE2F-220ENST00000472479 PIK3CAP42336 1068 aa11.38□□□□□ -0.59
UBE2F-220ENST00000472479 OR1G1P47890 313 aa11.38□□□□□ -0.59
UBE2F-220ENST00000472479 RGS19P49795 217 aa11.38□□□□□ -0.59
UBE2F-220ENST00000472479 GATMP50440 423 aa11.38□□□□□ -0.59
UBE2F-220ENST00000472479 MXI1P50539 228 aa11.38□□□□□ -0.59
UBE2F-220ENST00000472479 MARSP56192 900 aaKnown RBP11.38□□□□□ -0.59
UBE2F-220ENST00000472479 MYL7Q01449 175 aa11.38□□□□□ -0.59
UBE2F-220ENST00000472479 GRIK3Q13003 919 aa11.38□□□□□ -0.59
UBE2F-220ENST00000472479 SHHQ15465 462 aa11.38□□□□□ -0.59
UBE2F-220ENST00000472479 WDR44Q5JSH3 913 aa11.38□□□□□ -0.59
UBE2F-220ENST00000472479 KRT39Q6A163 491 aa11.38□□□□□ -0.59
UBE2F-220ENST00000472479 ZNF598Q86UK7 904 aaKnown RBP11.38□□□□□ -0.59
UBE2F-220ENST00000472479 TRIM59Q8IWR1 403 aa11.38□□□□□ -0.59
UBE2F-220ENST00000472479 DRC7Q8IY82 874 aa11.38□□□□□ -0.59
UBE2F-220ENST00000472479 PHOSPHO2Q8TCD6 241 aa11.38□□□□□ -0.59
UBE2F-220ENST00000472479 IMPG2Q9BZV3 1241 aa11.38□□□□□ -0.59
UBE2F-220ENST00000472479 MTMR12Q9C0I1 747 aa11.38□□□□□ -0.59
UBE2F-220ENST00000472479 TMEM8AQ9HCN3 771 aa11.38□□□□□ -0.59
UBE2F-220ENST00000472479 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.38□□□□□ -0.59
UBE2F-220ENST00000472479 CXXC1Q9P0U4 656 aaPredicted RBP11.38□□□□□ -0.59
UBE2F-220ENST00000472479 IFNKQ9P0W0 207 aa11.38□□□□□ -0.59
UBE2F-220ENST00000472479 CNTN3Q9P232 1028 aa11.38□□□□□ -0.59
UBE2F-220ENST00000472479 AGAP1Q9UPQ3 857 aa11.38□□□□□ -0.59
UBE2F-220ENST00000472479 DERAQ9Y315 318 aa11.38□□□□□ -0.59
UBE2F-220ENST00000472479 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.38□□□□□ -0.59
UBE2F-220ENST00000472479 SCN5AQ14524 2016 aa11.38□□□□□ -0.59
UBE2F-220ENST00000472479 CASTOR2A6NHX0 329 aa11.37□□□□□ -0.59
UBE2F-220ENST00000472479 ALDH2P05091 517 aa11.37□□□□□ -0.59
UBE2F-220ENST00000472479 ITGB3P05106 788 aa11.37□□□□□ -0.59
UBE2F-220ENST00000472479 ZNF18P17022 549 aa11.37□□□□□ -0.59
UBE2F-220ENST00000472479 FMO5P49326 533 aa11.37□□□□□ -0.59
UBE2F-220ENST00000472479 RBP5P82980 135 aa11.37□□□□□ -0.59
UBE2F-220ENST00000472479 CLLU1OSQ5K130 101 aa11.37□□□□□ -0.59
UBE2F-220ENST00000472479 C9orf50Q5SZB4 431 aa11.37□□□□□ -0.59
UBE2F-220ENST00000472479 SV2AQ7L0J3 742 aa11.37□□□□□ -0.59
UBE2F-220ENST00000472479 TRAPPC11Q7Z392 1133 aa11.37□□□□□ -0.59
UBE2F-220ENST00000472479 OR5B17Q8NGF7 314 aa11.37□□□□□ -0.59
UBE2F-220ENST00000472479 C18orf25Q96B23 403 aaPredicted RBP11.37□□□□□ -0.59
UBE2F-220ENST00000472479 VWCEQ96DN2 955 aa11.37□□□□□ -0.59
UBE2F-220ENST00000472479 BORCS6Q96GS4 357 aa11.37□□□□□ -0.59
UBE2F-220ENST00000472479 MIOSQ9NXC5 875 aa11.37□□□□□ -0.59
UBE2F-220ENST00000472479 C2CD2Q9Y426 696 aa11.37□□□□□ -0.59
UBE2F-220ENST00000472479 INSL6Q9Y581 213 aa11.37□□□□□ -0.59
UBE2F-220ENST00000472479 NUB1Q9Y5A7 615 aa11.37□□□□□ -0.59
UBE2F-220ENST00000472479 TANC1Q9C0D5 1861 aa11.36□□□□□ -0.59
UBE2F-220ENST00000472479 SIP14410 1827 aa11.36□□□□□ -0.59
UBE2F-220ENST00000472479 ZC3H11AO75152 810 aaKnown RBP eCLIP11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms