RNA–Protein interactions for RNA: ENST00000470463.1

SND1-208, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 4

Gene SND1, Length 530 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-208ENST00000470463 CABYRO75952 493 aa11.82□□□□□ -0.52
SND1-208ENST00000470463 VTNP04004 478 aa11.82□□□□□ -0.52
SND1-208ENST00000470463 C6orf222P0C671 652 aaPredicted RBP11.82□□□□□ -0.52
SND1-208ENST00000470463 CST5P28325 142 aaPredicted RBP11.82□□□□□ -0.52
SND1-208ENST00000470463 HOXC8P31273 242 aa11.82□□□□□ -0.52
SND1-208ENST00000470463 TRPC3Q13507 836 aa11.82□□□□□ -0.52
SND1-208ENST00000470463 NCOA4Q13772 614 aa11.82□□□□□ -0.52
SND1-208ENST00000470463 AMHR2Q16671 573 aa11.82□□□□□ -0.52
SND1-208ENST00000470463 GNASQ5JWF2 1037 aa11.82□□□□□ -0.52
SND1-208ENST00000470463 TDRD10Q5VZ19 366 aaKnown RBP11.82□□□□□ -0.52
SND1-208ENST00000470463 NOTUMQ6P988 496 aa11.82□□□□□ -0.52
SND1-208ENST00000470463 GJB7Q6PEY0 223 aa11.82□□□□□ -0.52
SND1-208ENST00000470463 ZBTB33Q86T24 672 aa11.82□□□□□ -0.52
SND1-208ENST00000470463 ARHGEF19Q8IW93 802 aa11.82□□□□□ -0.52
SND1-208ENST00000470463 SYCE1Q8N0S2 351 aa11.82□□□□□ -0.52
SND1-208ENST00000470463 TTC39CQ8N584 583 aa11.82□□□□□ -0.52
SND1-208ENST00000470463 PCSK9Q8NBP7 692 aaKnown RBP11.82□□□□□ -0.52
SND1-208ENST00000470463 SLC30A5Q8TAD4 765 aa11.82□□□□□ -0.52
SND1-208ENST00000470463 PXYLP1Q8TE99 480 aa11.82□□□□□ -0.52
SND1-208ENST00000470463 CTNNBL1Q8WYA6 563 aaPredicted RBP11.82□□□□□ -0.52
SND1-208ENST00000470463 ZNF516Q92618 1163 aa11.82□□□□□ -0.52
SND1-208ENST00000470463 POP1Q99575 1024 aaKnown RBP11.82□□□□□ -0.52
SND1-208ENST00000470463 AGPAT1Q99943 283 aa11.82□□□□□ -0.52
SND1-208ENST00000470463 CCDC94Q9BW85 323 aaPredicted RBP11.82□□□□□ -0.52
SND1-208ENST00000470463 LACRTQ9GZZ8 138 aa11.82□□□□□ -0.52
SND1-208ENST00000470463 CDT1Q9H211 546 aa11.82□□□□□ -0.52
SND1-208ENST00000470463 ADAMTS10Q9H324 1103 aa11.82□□□□□ -0.52
SND1-208ENST00000470463 DERAQ9Y315 318 aa11.82□□□□□ -0.52
SND1-208ENST00000470463 PCDHB2Q9Y5E7 798 aa11.82□□□□□ -0.52
SND1-208ENST00000470463 MRFAP1Q9Y605 127 aa11.82□□□□□ -0.52
SND1-208ENST00000470463 DOCK3Q8IZD9 2030 aa11.81□□□□□ -0.52
SND1-208ENST00000470463 MACROD2A1Z1Q3 448 aa11.81□□□□□ -0.52
SND1-208ENST00000470463 ANKRD62A6NC57 917 aa11.81□□□□□ -0.52
SND1-208ENST00000470463 EFCAB8A8MWE9 144 aa11.81□□□□□ -0.52
SND1-208ENST00000470463 TSPAN1O60635 241 aa11.81□□□□□ -0.52
SND1-208ENST00000470463 GPR32O75388 356 aa11.81□□□□□ -0.52
SND1-208ENST00000470463 HMGCRP04035 888 aa11.81□□□□□ -0.52
SND1-208ENST00000470463 EDN1P05305 212 aa11.81□□□□□ -0.52
SND1-208ENST00000470463 TMEM253P0C7T8 217 aa11.81□□□□□ -0.52
SND1-208ENST00000470463 HARSP12081 509 aaKnown RBP11.81□□□□□ -0.52
SND1-208ENST00000470463 P4HA1P13674 534 aa11.81□□□□□ -0.52
SND1-208ENST00000470463 DARSP14868 501 aaKnown RBP11.81□□□□□ -0.52
SND1-208ENST00000470463 TCP1P17987 556 aaKnown RBP11.81□□□□□ -0.52
SND1-208ENST00000470463 ARF4P18085 180 aaPredicted RBP11.81□□□□□ -0.52
SND1-208ENST00000470463 EIF4BP23588 611 aaKnown RBP11.81□□□□□ -0.52
SND1-208ENST00000470463 ATICP31939 592 aa11.81□□□□□ -0.52
SND1-208ENST00000470463 GRM5P41594 1212 aa11.81□□□□□ -0.52
SND1-208ENST00000470463 CRYBB1P53674 252 aaPredicted RBP11.81□□□□□ -0.52
SND1-208ENST00000470463 NAP1L1P55209 391 aaKnown RBP11.81□□□□□ -0.52
SND1-208ENST00000470463 CKAP4Q07065 602 aaKnown RBP11.81□□□□□ -0.52
SND1-208ENST00000470463 CUL2Q13617 745 aa11.81□□□□□ -0.52
SND1-208ENST00000470463 ENOX2Q16206 610 aaKnown RBP11.81□□□□□ -0.52
SND1-208ENST00000470463 PAPD7Q5XG87 772 aaKnown RBP11.81□□□□□ -0.52
SND1-208ENST00000470463 SLC27A1Q6PCB7 646 aa11.81□□□□□ -0.52
SND1-208ENST00000470463 TRIM72Q6ZMU5 477 aa11.81□□□□□ -0.52
SND1-208ENST00000470463 CATSPER4Q7RTX7 472 aa11.81□□□□□ -0.52
SND1-208ENST00000470463 TRAPPC11Q7Z392 1133 aa11.81□□□□□ -0.52
SND1-208ENST00000470463 SESTD1Q86VW0 696 aa11.81□□□□□ -0.52
SND1-208ENST00000470463 RHOT2Q8IXI1 618 aa11.81□□□□□ -0.52
SND1-208ENST00000470463 THNSL1Q8IYQ7 743 aa11.81□□□□□ -0.52
SND1-208ENST00000470463 TRIB2Q92519 343 aa11.81□□□□□ -0.52
SND1-208ENST00000470463 SEMA4DQ92854 862 aa11.81□□□□□ -0.52
SND1-208ENST00000470463 TRIM11Q96F44 468 aa11.81□□□□□ -0.52
SND1-208ENST00000470463 SYT11Q9BT88 431 aa11.81□□□□□ -0.52
SND1-208ENST00000470463 PDZD7Q9H5P4 517 aa11.81□□□□□ -0.52
SND1-208ENST00000470463 MINDY3Q9H8M7 445 aa11.81□□□□□ -0.52
SND1-208ENST00000470463 TOPORSQ9NS56 1045 aaPredicted RBP11.81□□□□□ -0.52
SND1-208ENST00000470463 RNF14Q9UBS8 474 aa11.81□□□□□ -0.52
SND1-208ENST00000470463 SRRDQ9UH36 339 aa11.81□□□□□ -0.52
SND1-208ENST00000470463 NENFQ9UMX5 172 aa11.81□□□□□ -0.52
SND1-208ENST00000470463 C2CD2Q9Y426 696 aa11.81□□□□□ -0.52
SND1-208ENST00000470463 SAR1BQ9Y6B6 198 aa11.81□□□□□ -0.52
SND1-208ENST00000470463 TULP1O00294 542 aaPredicted RBP11.8□□□□□ -0.52
SND1-208ENST00000470463 DDX3XO00571 662 aaKnown RBP eCLIP11.8□□□□□ -0.52
SND1-208ENST00000470463 LRRN2O75325 713 aa11.8□□□□□ -0.52
SND1-208ENST00000470463 ASS1P00966 412 aaKnown RBP11.8□□□□□ -0.52
SND1-208ENST00000470463 GJB1P08034 283 aa11.8□□□□□ -0.52
SND1-208ENST00000470463 STAG3L1P0CL83 205 aa11.8□□□□□ -0.52
SND1-208ENST00000470463 CTGFP29279 349 aa11.8□□□□□ -0.52
SND1-208ENST00000470463 USP8P40818 1118 aa11.8□□□□□ -0.52
SND1-208ENST00000470463 YARSP54577 528 aaKnown RBP11.8□□□□□ -0.52
SND1-208ENST00000470463 NOP14P78316 857 aaKnown RBP11.8□□□□□ -0.52
SND1-208ENST00000470463 PRKCZQ05513 592 aa11.8□□□□□ -0.52
SND1-208ENST00000470463 PTPN11Q06124 597 aaPredicted RBP11.8□□□□□ -0.52
SND1-208ENST00000470463 TCEAL1Q15170 157 aa11.8□□□□□ -0.52
SND1-208ENST00000470463 FAM43BQ6ZT52 329 aaPredicted RBP11.8□□□□□ -0.52
SND1-208ENST00000470463 RPAINQ86UA6 219 aa11.8□□□□□ -0.52
SND1-208ENST00000470463 GLYCTKQ8IVS8 523 aa11.8□□□□□ -0.52
SND1-208ENST00000470463 EPS8L1Q8TE68 723 aa11.8□□□□□ -0.52
SND1-208ENST00000470463 U2AF1L4Q8WU68 220 aaKnown RBP11.8□□□□□ -0.52
SND1-208ENST00000470463 KREMEN1Q96MU8 473 aa11.8□□□□□ -0.52
SND1-208ENST00000470463 ACAP3Q96P50 834 aa11.8□□□□□ -0.52
SND1-208ENST00000470463 SEZ6LQ9BYH1 1024 aa11.8□□□□□ -0.52
SND1-208ENST00000470463 IRX2Q9BZI1 471 aaPredicted RBP11.8□□□□□ -0.52
SND1-208ENST00000470463 AJAP1Q9UKB5 411 aaPredicted RBP11.8□□□□□ -0.52
SND1-208ENST00000470463 CNTN6Q9UQ52 1028 aa11.8□□□□□ -0.52
SND1-208ENST00000470463 PCDHGC5Q9Y5F6 944 aa11.8□□□□□ -0.52
SND1-208ENST00000470463 EVPLQ92817 2033 aa11.79□□□□□ -0.52
SND1-208ENST00000470463 RCCD1A6NED2 376 aa11.79□□□□□ -0.52
SND1-208ENST00000470463 B4GALT5O43286 388 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms