RNA–Protein interactions for RNA: ENST00000470432.5

ECM1-204, Transcript of extracellular matrix protein 1, humanhuman

TSL 2

Gene ECM1, Length 3,066 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECM1-204ENST00000470432 SPDL1Q96EA4 605 aa12.91□□□□□ -0.34
ECM1-204ENST00000470432 DCLK3Q9C098 648 aa12.91□□□□□ -0.34
ECM1-204ENST00000470432 HSPBP1Q9NZL4 362 aa12.91□□□□□ -0.34
ECM1-204ENST00000470432 TBK1Q9UHD2 729 aa12.91□□□□□ -0.34
ECM1-204ENST00000470432 SMCHD1A6NHR9 2005 aa12.91□□□□□ -0.34
ECM1-204ENST00000470432 LRRC37AA6NMS7 1700 aa12.91□□□□□ -0.34
ECM1-204ENST00000470432 TISP43B9A030 160 aa12.9□□□□□ -0.34
ECM1-204ENST00000470432 MAGEB2O15479 319 aa12.9□□□□□ -0.34
ECM1-204ENST00000470432 SMNDC1O75940 238 aaKnown RBP eCLIP12.9□□□□□ -0.34
ECM1-204ENST00000470432 LUC7L3O95232 432 aaKnown RBP12.9□□□□□ -0.34
ECM1-204ENST00000470432 FOXN2P32314 431 aa12.9□□□□□ -0.34
ECM1-204ENST00000470432 PADI6Q6TGC4 694 aa12.9□□□□□ -0.34
ECM1-204ENST00000470432 B3GNT9Q6UX72 402 aa12.9□□□□□ -0.34
ECM1-204ENST00000470432 ZNF577Q9BSK1 485 aa12.9□□□□□ -0.34
ECM1-204ENST00000470432 ZC3H12CQ9C0D7 883 aaKnown RBP12.9□□□□□ -0.34
ECM1-204ENST00000470432 KCNQ5Q9NR82 932 aa12.9□□□□□ -0.34
ECM1-204ENST00000470432 DNAJC17Q9NVM6 304 aaKnown RBP12.9□□□□□ -0.34
ECM1-204ENST00000470432 EURLQ9NYK6 297 aa12.9□□□□□ -0.34
ECM1-204ENST00000470432 PRR12Q9ULL5 1215 aa12.9□□□□□ -0.34
ECM1-204ENST00000470432 STARD13Q9Y3M8 1113 aa12.9□□□□□ -0.34
ECM1-204ENST00000470432 FAM47DPA6NHR8 397 aa12.9□□□□□ -0.34
ECM1-204ENST00000470432 CFBP00751 764 aa12.9□□□□□ -0.34
ECM1-204ENST00000470432 CENPCQ03188 943 aa12.9□□□□□ -0.34
ECM1-204ENST00000470432 TCP10Q12799 353 aa12.9□□□□□ -0.34
ECM1-204ENST00000470432 TRIP13Q15645 432 aaPredicted RBP12.9□□□□□ -0.34
ECM1-204ENST00000470432 RIBC1Q8N443 379 aaPredicted RBP12.9□□□□□ -0.34
ECM1-204ENST00000470432 ATG4AQ8WYN0 398 aa12.9□□□□□ -0.34
ECM1-204ENST00000470432 LRMDAQ9H2I8 198 aa12.9□□□□□ -0.34
ECM1-204ENST00000470432 CORO1CQ9ULV4 474 aaPredicted RBP12.9□□□□□ -0.34
ECM1-204ENST00000470432 NEU2Q9Y3R4 380 aa12.9□□□□□ -0.34
ECM1-204ENST00000470432 SKAP2O75563 359 aaPredicted RBP12.9□□□□□ -0.35
ECM1-204ENST00000470432 MAPK4P31152 587 aa12.9□□□□□ -0.35
ECM1-204ENST00000470432 CRKP46108 304 aa12.9□□□□□ -0.35
ECM1-204ENST00000470432 YARSP54577 528 aaKnown RBP12.9□□□□□ -0.35
ECM1-204ENST00000470432 SNRPFP62306 86 aaKnown RBP12.9□□□□□ -0.35
ECM1-204ENST00000470432 IRX1P78414 480 aaPredicted RBP12.9□□□□□ -0.35
ECM1-204ENST00000470432 GRIK3Q13003 919 aa12.9□□□□□ -0.35
ECM1-204ENST00000470432 BLMHQ13867 455 aa12.9□□□□□ -0.35
ECM1-204ENST00000470432 SETDB1Q15047 1291 aa12.9□□□□□ -0.35
ECM1-204ENST00000470432 ABCB5Q2M3G0 1257 aa12.9□□□□□ -0.35
ECM1-204ENST00000470432 TMEM63BQ5T3F8 832 aa12.9□□□□□ -0.35
ECM1-204ENST00000470432 CAPRIN2Q6IMN6 1127 aaKnown RBP12.9□□□□□ -0.35
ECM1-204ENST00000470432 KIFAP3Q92845 792 aa12.9□□□□□ -0.35
ECM1-204ENST00000470432 UTP4Q969X6 686 aaKnown RBP12.9□□□□□ -0.35
ECM1-204ENST00000470432 ZDHHC15Q96MV8 337 aa12.9□□□□□ -0.35
ECM1-204ENST00000470432 ZNF536O15090 1300 aa12.89□□□□□ -0.35
ECM1-204ENST00000470432 ZNFX1Q9P2E3 1918 aaKnown RBP12.89□□□□□ -0.35
ECM1-204ENST00000470432 GRIN3BO60391 1043 aa12.89□□□□□ -0.35
ECM1-204ENST00000470432 POLR2MP0CAP2 368 aa12.89□□□□□ -0.35
ECM1-204ENST00000470432 SLC1A1P43005 524 aa12.89□□□□□ -0.35
ECM1-204ENST00000470432 POLGP54098 1239 aaPredicted RBP12.89□□□□□ -0.35
ECM1-204ENST00000470432 EP400NLQ6ZTU2 488 aa12.89□□□□□ -0.35
ECM1-204ENST00000470432 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.89□□□□□ -0.35
ECM1-204ENST00000470432 DDX1Q92499 740 aaKnown RBP12.89□□□□□ -0.35
ECM1-204ENST00000470432 TEKT3Q9BXF9 490 aa12.89□□□□□ -0.35
ECM1-204ENST00000470432 MYLK2Q9H1R3 596 aa12.89□□□□□ -0.35
ECM1-204ENST00000470432 ANAPC7Q9UJX3 599 aa12.89□□□□□ -0.35
ECM1-204ENST00000470432 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.89□□□□□ -0.35
ECM1-204ENST00000470432 RASA4BC9J798 803 aa12.89□□□□□ -0.35
ECM1-204ENST00000470432 E7ENQ6 273 aa12.89□□□□□ -0.35
ECM1-204ENST00000470432 PPEF1O14829 653 aaPredicted RBP12.89□□□□□ -0.35
ECM1-204ENST00000470432 RASA4O43374 803 aa12.89□□□□□ -0.35
ECM1-204ENST00000470432 ABHD2P08910 425 aa12.89□□□□□ -0.35
ECM1-204ENST00000470432 WDR4P57081 412 aaKnown RBP12.89□□□□□ -0.35
ECM1-204ENST00000470432 NR1H3Q13133 447 aa12.89□□□□□ -0.35
ECM1-204ENST00000470432 MIS18BP1Q6P0N0 1132 aa12.89□□□□□ -0.35
ECM1-204ENST00000470432 SEPT14Q6ZU15 432 aa12.89□□□□□ -0.35
ECM1-204ENST00000470432 SH3BP5LQ7L8J4 393 aa12.89□□□□□ -0.35
ECM1-204ENST00000470432 AGGF1Q8N302 714 aaeCLIP12.89□□□□□ -0.35
ECM1-204ENST00000470432 ZSWIM2Q8NEG5 633 aa12.89□□□□□ -0.35
ECM1-204ENST00000470432 MAML1Q92585 1016 aa12.89□□□□□ -0.35
ECM1-204ENST00000470432 ZNF622Q969S3 477 aaKnown RBP eCLIP12.89□□□□□ -0.35
ECM1-204ENST00000470432 FAM81BQ96LP2 452 aa12.89□□□□□ -0.35
ECM1-204ENST00000470432 TMEM237Q96Q45 408 aa12.89□□□□□ -0.35
ECM1-204ENST00000470432 EHMT1Q9H9B1 1298 aa12.89□□□□□ -0.35
ECM1-204ENST00000470432 UBN1Q9NPG3 1134 aa12.89□□□□□ -0.35
ECM1-204ENST00000470432 HGSO14964 777 aaPredicted RBP12.88□□□□□ -0.35
ECM1-204ENST00000470432 GDF11O95390 407 aa12.88□□□□□ -0.35
ECM1-204ENST00000470432 ASMTLO95671 621 aa12.88□□□□□ -0.35
ECM1-204ENST00000470432 VIL1P09327 827 aaKnown RBP12.88□□□□□ -0.35
ECM1-204ENST00000470432 ARP10275 920 aa12.88□□□□□ -0.35
ECM1-204ENST00000470432 CACNB3P54284 484 aa12.88□□□□□ -0.35
ECM1-204ENST00000470432 SATB1Q01826 763 aa12.88□□□□□ -0.35
ECM1-204ENST00000470432 TNIP1Q15025 636 aa12.88□□□□□ -0.35
ECM1-204ENST00000470432 CLEC16AQ2KHT3 1053 aa12.88□□□□□ -0.35
ECM1-204ENST00000470432 CDCA2Q69YH5 1023 aaPredicted RBP12.88□□□□□ -0.35
ECM1-204ENST00000470432 CEP128Q6ZU80 1094 aa12.88□□□□□ -0.35
ECM1-204ENST00000470432 TEX9Q8N6V9 391 aa12.88□□□□□ -0.35
ECM1-204ENST00000470432 CCDC89Q8N998 374 aa12.88□□□□□ -0.35
ECM1-204ENST00000470432 ARMC2Q8NEN0 867 aa12.88□□□□□ -0.35
ECM1-204ENST00000470432 HELQQ8TDG4 1101 aa12.88□□□□□ -0.35
ECM1-204ENST00000470432 INPP5DQ92835 1189 aa12.88□□□□□ -0.35
ECM1-204ENST00000470432 SEMA4DQ92854 862 aa12.88□□□□□ -0.35
ECM1-204ENST00000470432 PWWP2AQ96N64 755 aa12.88□□□□□ -0.35
ECM1-204ENST00000470432 HERPUD2Q9BSE4 406 aa12.88□□□□□ -0.35
ECM1-204ENST00000470432 IDI2Q9BXS1 227 aa12.88□□□□□ -0.35
ECM1-204ENST00000470432 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.88□□□□□ -0.35
ECM1-204ENST00000470432 FAM198AQ9UFP1 575 aa12.88□□□□□ -0.35
ECM1-204ENST00000470432 USH1CQ9Y6N9 552 aa12.88□□□□□ -0.35
ECM1-204ENST00000470432 KLRG2A4D1S0 409 aaPredicted RBP12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms