RNA–Protein interactions for RNA: ENST00000469129.1

SMC1A-205, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 847 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-205ENST00000469129 FDXACB1Q9BRP7 624 aaPredicted RBP10.05□□□□□ -0.8
SMC1A-205ENST00000469129 CDT1Q9H211 546 aa10.05□□□□□ -0.8
SMC1A-205ENST00000469129 RPF1Q9H9Y2 349 aaKnown RBP10.05□□□□□ -0.8
SMC1A-205ENST00000469129 IFT122Q9HBG6 1241 aa10.05□□□□□ -0.8
SMC1A-205ENST00000469129 PTPRHQ9HD43 1115 aa10.05□□□□□ -0.8
SMC1A-205ENST00000469129 RNF186Q9NXI6 227 aa10.05□□□□□ -0.8
SMC1A-205ENST00000469129 SAGE1Q9NXZ1 904 aa10.05□□□□□ -0.8
SMC1A-205ENST00000469129 FLRT1Q9NZU1 646 aa10.05□□□□□ -0.8
SMC1A-205ENST00000469129 SNX12Q9UMY4 172 aa10.05□□□□□ -0.8
SMC1A-205ENST00000469129 ANKRD62A6NC57 917 aa10.04□□□□□ -0.8
SMC1A-205ENST00000469129 ADCY6O43306 1168 aa10.04□□□□□ -0.8
SMC1A-205ENST00000469129 BUB1O43683 1085 aa10.04□□□□□ -0.8
SMC1A-205ENST00000469129 B4GALT4O60513 344 aa10.04□□□□□ -0.8
SMC1A-205ENST00000469129 RTN2O75298 545 aa10.04□□□□□ -0.8
SMC1A-205ENST00000469129 TRPA1O75762 1119 aa10.04□□□□□ -0.8
SMC1A-205ENST00000469129 VTNP04004 478 aa10.04□□□□□ -0.8
SMC1A-205ENST00000469129 RPLP2P05387 115 aaKnown RBP10.04□□□□□ -0.8
SMC1A-205ENST00000469129 MYL3P08590 195 aa10.04□□□□□ -0.8
SMC1A-205ENST00000469129 CLTAP09496 248 aa10.04□□□□□ -0.8
SMC1A-205ENST00000469129 GZMAP12544 262 aa10.04□□□□□ -0.8
SMC1A-205ENST00000469129 KRT5P13647 590 aa10.04□□□□□ -0.8
SMC1A-205ENST00000469129 CYP2C19P33261 490 aa10.04□□□□□ -0.8
SMC1A-205ENST00000469129 CDR2Q01850 454 aa10.04□□□□□ -0.8
SMC1A-205ENST00000469129 CUL2Q13617 745 aa10.04□□□□□ -0.8
SMC1A-205ENST00000469129 NCOA4Q13772 614 aa10.04□□□□□ -0.8
SMC1A-205ENST00000469129 ELF2Q15723 593 aa10.04□□□□□ -0.8
SMC1A-205ENST00000469129 DUOXA2Q1HG44 320 aa10.04□□□□□ -0.8
SMC1A-205ENST00000469129 ZBTB41Q5SVQ8 909 aa10.04□□□□□ -0.8
SMC1A-205ENST00000469129 LMBRD2Q68DH5 695 aaPredicted RBP10.04□□□□□ -0.8
SMC1A-205ENST00000469129 CCDC70Q6NSX1 233 aa10.04□□□□□ -0.8
SMC1A-205ENST00000469129 NT5DC4Q86YG4 428 aa10.04□□□□□ -0.8
SMC1A-205ENST00000469129 CD302Q8IX05 232 aa10.04□□□□□ -0.8
SMC1A-205ENST00000469129 RPUSD2Q8IZ73 545 aaKnown RBP10.04□□□□□ -0.8
SMC1A-205ENST00000469129 GPR161Q8N6U8 529 aaKnown RBP10.04□□□□□ -0.8
SMC1A-205ENST00000469129 ZNF516Q92618 1163 aa10.04□□□□□ -0.8
SMC1A-205ENST00000469129 TRIM11Q96F44 468 aa10.04□□□□□ -0.8
SMC1A-205ENST00000469129 FAXDC2Q96IV6 333 aa10.04□□□□□ -0.8
SMC1A-205ENST00000469129 PACSIN1Q9BY11 444 aa10.04□□□□□ -0.8
SMC1A-205ENST00000469129 GCOM2Q9BZD3 368 aaPredicted RBP10.04□□□□□ -0.8
SMC1A-205ENST00000469129 PDZD7Q9H5P4 517 aa10.04□□□□□ -0.8
SMC1A-205ENST00000469129 SPC25Q9HBM1 224 aa10.04□□□□□ -0.8
SMC1A-205ENST00000469129 RNF14Q9UBS8 474 aa10.04□□□□□ -0.8
SMC1A-205ENST00000469129 NOCTQ9UK39 431 aaKnown RBP10.04□□□□□ -0.8
SMC1A-205ENST00000469129 GJD2Q9UKL4 321 aa10.04□□□□□ -0.8
SMC1A-205ENST00000469129 DUSP10Q9Y6W6 482 aa10.04□□□□□ -0.8
SMC1A-205ENST00000469129 PTPRJQ12913 1337 aa10.04□□□□□ -0.8
SMC1A-205ENST00000469129 MBLAC1A4D2B0 266 aaPredicted RBP10.03□□□□□ -0.8
SMC1A-205ENST00000469129 HAS3O00219 553 aa10.03□□□□□ -0.8
SMC1A-205ENST00000469129 CES2O00748 559 aa10.03□□□□□ -0.8
SMC1A-205ENST00000469129 ENC1O14682 589 aa10.03□□□□□ -0.8
SMC1A-205ENST00000469129 B4GALT5O43286 388 aa10.03□□□□□ -0.8
SMC1A-205ENST00000469129 TSPAN1O60635 241 aa10.03□□□□□ -0.8
SMC1A-205ENST00000469129 DUSP11O75319 330 aaKnown RBP10.03□□□□□ -0.8
SMC1A-205ENST00000469129 PALMO75781 387 aa10.03□□□□□ -0.8
SMC1A-205ENST00000469129 VNN1O95497 513 aa10.03□□□□□ -0.8
SMC1A-205ENST00000469129 ASS1P00966 412 aaKnown RBP10.03□□□□□ -0.8
SMC1A-205ENST00000469129 IGHA2P01877 340 aa10.03□□□□□ -0.8
SMC1A-205ENST00000469129 TUBBP07437 444 aa10.03□□□□□ -0.8
SMC1A-205ENST00000469129 GJB1P08034 283 aa10.03□□□□□ -0.8
SMC1A-205ENST00000469129 CYP2C9P11712 490 aa10.03□□□□□ -0.8
SMC1A-205ENST00000469129 CYBAP13498 195 aa10.03□□□□□ -0.8
SMC1A-205ENST00000469129 CYP11B1P15538 503 aa10.03□□□□□ -0.8
SMC1A-205ENST00000469129 AXLP30530 894 aa10.03□□□□□ -0.8
SMC1A-205ENST00000469129 TNFSF9P41273 254 aa10.03□□□□□ -0.8
SMC1A-205ENST00000469129 NOP2P46087 812 aaKnown RBP10.03□□□□□ -0.8
SMC1A-205ENST00000469129 GALCP54803 685 aa10.03□□□□□ -0.8
SMC1A-205ENST00000469129 HADHBP55084 474 aaKnown RBP10.03□□□□□ -0.8
SMC1A-205ENST00000469129 LACTBP83111 547 aaPredicted RBP10.03□□□□□ -0.8
SMC1A-205ENST00000469129 ITIH3Q06033 890 aa10.03□□□□□ -0.8
SMC1A-205ENST00000469129 TRPC3Q13507 836 aa10.03□□□□□ -0.8
SMC1A-205ENST00000469129 TCEAL1Q15170 157 aa10.03□□□□□ -0.8
SMC1A-205ENST00000469129 CCL14Q16627 93 aa10.03□□□□□ -0.8
SMC1A-205ENST00000469129 FSCN1Q16658 493 aaKnown RBP10.03□□□□□ -0.8
SMC1A-205ENST00000469129 AMHR2Q16671 573 aa10.03□□□□□ -0.8
SMC1A-205ENST00000469129 MARCH8Q5T0T0 291 aa10.03□□□□□ -0.8
SMC1A-205ENST00000469129 CCDC181Q5TID7 509 aa10.03□□□□□ -0.8
SMC1A-205ENST00000469129 EEF1DP3Q658K8 133 aa10.03□□□□□ -0.8
SMC1A-205ENST00000469129 TRIM72Q6ZMU5 477 aa10.03□□□□□ -0.8
SMC1A-205ENST00000469129 RSRC2Q7L4I2 434 aaKnown RBP10.03□□□□□ -0.8
SMC1A-205ENST00000469129 THNSL1Q8IYQ7 743 aa10.03□□□□□ -0.8
SMC1A-205ENST00000469129 TNS4Q8IZW8 715 aa10.03□□□□□ -0.8
SMC1A-205ENST00000469129 PDCL2Q8N4E4 241 aa10.03□□□□□ -0.8
SMC1A-205ENST00000469129 OLIG1Q8TAK6 271 aa10.03□□□□□ -0.8
SMC1A-205ENST00000469129 KAT5Q92993 513 aa10.03□□□□□ -0.8
SMC1A-205ENST00000469129 FAM212AQ96EL1 285 aa10.03□□□□□ -0.8
SMC1A-205ENST00000469129 NIF3L1Q9GZT8 377 aa10.03□□□□□ -0.8
SMC1A-205ENST00000469129 ISCUQ9H1K1 167 aa10.03□□□□□ -0.8
SMC1A-205ENST00000469129 ASB7Q9H672 318 aa10.03□□□□□ -0.8
SMC1A-205ENST00000469129 MINDY3Q9H8M7 445 aa10.03□□□□□ -0.8
SMC1A-205ENST00000469129 PCDHB2Q9Y5E7 798 aa10.03□□□□□ -0.8
SMC1A-205ENST00000469129 C17orf102A2RUQ5 167 aa10.02□□□□□ -0.81
SMC1A-205ENST00000469129 GRID2IPA4D2P6 1211 aa10.02□□□□□ -0.81
SMC1A-205ENST00000469129 TTLL13PA6NNM8 815 aa10.02□□□□□ -0.81
SMC1A-205ENST00000469129 CYP26A1O43174 497 aa10.02□□□□□ -0.81
SMC1A-205ENST00000469129 STAG3L1P0CL83 205 aa10.02□□□□□ -0.81
SMC1A-205ENST00000469129 MYBL1P10243 752 aa10.02□□□□□ -0.81
SMC1A-205ENST00000469129 ARF4P18085 180 aaPredicted RBP10.02□□□□□ -0.81
SMC1A-205ENST00000469129 MCM3P25205 808 aa10.02□□□□□ -0.81
SMC1A-205ENST00000469129 PAFAH1B1P43034 410 aa10.02□□□□□ -0.81
SMC1A-205ENST00000469129 PSMC4P43686 418 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms