RNA–Protein interactions for RNA: ENST00000466732.2

VPS13D-203, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 5

Gene VPS13D, Length 377 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-203ENST00000466732 ODF1Q14990 250 aa5.21□□□□□ -1.58
VPS13D-203ENST00000466732 UBXN2BQ14CS0 331 aa5.21□□□□□ -1.58
VPS13D-203ENST00000466732 AGAP9Q5VTM2 703 aa5.21□□□□□ -1.58
VPS13D-203ENST00000466732 Q6ZPA2 131 aa5.21□□□□□ -1.58
VPS13D-203ENST00000466732 SPATA31D4Q6ZUB0 917 aa5.21□□□□□ -1.58
VPS13D-203ENST00000466732 MED25Q71SY5 747 aa5.21□□□□□ -1.58
VPS13D-203ENST00000466732 MIGA2Q7L4E1 593 aa5.21□□□□□ -1.58
VPS13D-203ENST00000466732 RHOT2Q8IXI1 618 aa5.21□□□□□ -1.58
VPS13D-203ENST00000466732 ULK2Q8IYT8 1036 aa5.21□□□□□ -1.58
VPS13D-203ENST00000466732 PROKR1Q8TCW9 393 aa5.21□□□□□ -1.58
VPS13D-203ENST00000466732 HDAC10Q969S8 669 aa5.21□□□□□ -1.58
VPS13D-203ENST00000466732 MYEOVQ96EZ4 313 aa5.21□□□□□ -1.58
VPS13D-203ENST00000466732 LIMCH1Q9UPQ0 1083 aa5.21□□□□□ -1.58
VPS13D-203ENST00000466732 NOP58Q9Y2X3 529 aaKnown RBP5.21□□□□□ -1.58
VPS13D-203ENST00000466732 IPPQ9Y573 584 aa5.21□□□□□ -1.58
VPS13D-203ENST00000466732 PCDHA13Q9Y5I0 950 aa5.21□□□□□ -1.58
VPS13D-203ENST00000466732 CENPVL1A0A0U1RR11 272 aa5.2□□□□□ -1.58
VPS13D-203ENST00000466732 TMEM200CA6NKL6 621 aa5.2□□□□□ -1.58
VPS13D-203ENST00000466732 LPXNO60711 386 aa5.2□□□□□ -1.58
VPS13D-203ENST00000466732 NDUFA10O95299 355 aa5.2□□□□□ -1.58
VPS13D-203ENST00000466732 KRT4P19013 534 aa5.2□□□□□ -1.58
VPS13D-203ENST00000466732 EDNRBP24530 442 aa5.2□□□□□ -1.58
VPS13D-203ENST00000466732 TGFB2P61812 414 aa5.2□□□□□ -1.58
VPS13D-203ENST00000466732 DPTQ07507 201 aa5.2□□□□□ -1.58
VPS13D-203ENST00000466732 TARDBPQ13148 414 aaKnown RBP eCLIP5.2□□□□□ -1.58
VPS13D-203ENST00000466732 BEAN1Q3B7T3 259 aa5.2□□□□□ -1.58
VPS13D-203ENST00000466732 BRDTQ58F21 947 aaPredicted RBP5.2□□□□□ -1.58
VPS13D-203ENST00000466732 LY6G5CQ5SRR4 150 aa5.2□□□□□ -1.58
VPS13D-203ENST00000466732 EFCAB2Q5VUJ9 269 aa5.2□□□□□ -1.58
VPS13D-203ENST00000466732 KCNV1Q6PIU1 500 aa5.2□□□□□ -1.58
VPS13D-203ENST00000466732 UBE3BQ7Z3V4 1068 aa5.2□□□□□ -1.58
VPS13D-203ENST00000466732 LDLRAD3Q86YD5 345 aa5.2□□□□□ -1.58
VPS13D-203ENST00000466732 RAB24Q969Q5 203 aa5.2□□□□□ -1.58
VPS13D-203ENST00000466732 COA7Q96BR5 231 aa5.2□□□□□ -1.58
VPS13D-203ENST00000466732 FBXO34Q9NWN3 711 aa5.2□□□□□ -1.58
VPS13D-203ENST00000466732 DKK2Q9UBU2 259 aa5.2□□□□□ -1.58
VPS13D-203ENST00000466732 SERPINB13Q9UIV8 391 aa5.2□□□□□ -1.58
VPS13D-203ENST00000466732 ATP11BQ9Y2G3 1177 aa5.2□□□□□ -1.58
VPS13D-203ENST00000466732 SPEF1Q9Y4P9 236 aa5.2□□□□□ -1.58
VPS13D-203ENST00000466732 CCDC154A6NI56 674 aa5.19□□□□□ -1.58
VPS13D-203ENST00000466732 SLC6A2P23975 617 aa5.19□□□□□ -1.58
VPS13D-203ENST00000466732 CCND1P24385 295 aa5.19□□□□□ -1.58
VPS13D-203ENST00000466732 CTXN1P60606 82 aa5.19□□□□□ -1.58
VPS13D-203ENST00000466732 CDC42EP1Q00587 391 aa5.19□□□□□ -1.58
VPS13D-203ENST00000466732 IL10RAQ13651 578 aa5.19□□□□□ -1.58
VPS13D-203ENST00000466732 PTPAQ15257 358 aa5.19□□□□□ -1.58
VPS13D-203ENST00000466732 C3orf36Q3SXR2 165 aa5.19□□□□□ -1.58
VPS13D-203ENST00000466732 TSHZ3Q63HK5 1081 aa5.19□□□□□ -1.58
VPS13D-203ENST00000466732 RPUSD2Q8IZ73 545 aaKnown RBP5.19□□□□□ -1.58
VPS13D-203ENST00000466732 DCBLD1Q8N8Z6 715 aa5.19□□□□□ -1.58
VPS13D-203ENST00000466732 CPEB3Q8NE35 698 aaKnown RBP5.19□□□□□ -1.58
VPS13D-203ENST00000466732 OR56A1Q8NGH5 318 aa5.19□□□□□ -1.58
VPS13D-203ENST00000466732 TMX3Q96JJ7 454 aa5.19□□□□□ -1.58
VPS13D-203ENST00000466732 PRRX2Q99811 253 aa5.19□□□□□ -1.58
VPS13D-203ENST00000466732 REXO4Q9GZR2 422 aaKnown RBP5.19□□□□□ -1.58
VPS13D-203ENST00000466732 TDP1Q9NUW8 608 aa5.19□□□□□ -1.58
VPS13D-203ENST00000466732 KLHL11Q9NVR0 708 aa5.19□□□□□ -1.58
VPS13D-203ENST00000466732 MAP3K2Q9Y2U5 619 aa5.19□□□□□ -1.58
VPS13D-203ENST00000466732 FPGT-TNNI3KV9GXZ4 949 aa5.19□□□□□ -1.58
VPS13D-203ENST00000466732 TCRBV7S2A1N4TA0A589 114 aa5.18□□□□□ -1.58
VPS13D-203ENST00000466732 MARCH11A6NNE9 402 aa5.18□□□□□ -1.58
VPS13D-203ENST00000466732 SGTAO43765 313 aa5.18□□□□□ -1.58
VPS13D-203ENST00000466732 PRSS23O95084 383 aa5.18□□□□□ -1.58
VPS13D-203ENST00000466732 GCSHP23434 173 aa5.18□□□□□ -1.58
VPS13D-203ENST00000466732 BMPR1AP36894 532 aa5.18□□□□□ -1.58
VPS13D-203ENST00000466732 INHBCP55103 352 aa5.18□□□□□ -1.58
VPS13D-203ENST00000466732 ADKP55263 362 aaKnown RBP5.18□□□□□ -1.58
VPS13D-203ENST00000466732 DACT2Q5SW24 774 aa5.18□□□□□ -1.58
VPS13D-203ENST00000466732 RSPH3Q86UC2 560 aa5.18□□□□□ -1.58
VPS13D-203ENST00000466732 VRK3Q8IV63 474 aa5.18□□□□□ -1.58
VPS13D-203ENST00000466732 ARHGEF19Q8IW93 802 aa5.18□□□□□ -1.58
VPS13D-203ENST00000466732 CHFRQ96EP1 664 aa5.18□□□□□ -1.58
VPS13D-203ENST00000466732 C11orf54Q9H0W9 315 aaPredicted RBP5.18□□□□□ -1.58
VPS13D-203ENST00000466732 ANKFY1Q9P2R3 1169 aa5.18□□□□□ -1.58
VPS13D-203ENST00000466732 TMEM191CA6NGB0 347 aa5.17□□□□□ -1.58
VPS13D-203ENST00000466732 KIAA0391O15091 583 aaKnown RBP5.17□□□□□ -1.58
VPS13D-203ENST00000466732 ZRANB2O95218 330 aaKnown RBP eCLIP5.17□□□□□ -1.58
VPS13D-203ENST00000466732 CFIP05156 583 aa5.17□□□□□ -1.58
VPS13D-203ENST00000466732 HLA-DOAP06340 250 aa5.17□□□□□ -1.58
VPS13D-203ENST00000466732 ELANEP08246 267 aa5.17□□□□□ -1.58
VPS13D-203ENST00000466732 ALAS1P13196 640 aa5.17□□□□□ -1.58
VPS13D-203ENST00000466732 RECQLP46063 649 aaPredicted RBP5.17□□□□□ -1.58
VPS13D-203ENST00000466732 CREMQ03060 361 aa5.17□□□□□ -1.58
VPS13D-203ENST00000466732 RESTQ13127 1097 aa5.17□□□□□ -1.58
VPS13D-203ENST00000466732 UAP1L1Q3KQV9 507 aa5.17□□□□□ -1.58
VPS13D-203ENST00000466732 LAIR1Q6GTX8 287 aa5.17□□□□□ -1.58
VPS13D-203ENST00000466732 PPP4R3AQ6IN85 833 aa5.17□□□□□ -1.58
VPS13D-203ENST00000466732 MRGPRGQ86SM5 289 aa5.17□□□□□ -1.58
VPS13D-203ENST00000466732 MAPKAPK5Q8IW41 473 aa5.17□□□□□ -1.58
VPS13D-203ENST00000466732 IFI44Q8TCB0 444 aa5.17□□□□□ -1.58
VPS13D-203ENST00000466732 KAT5Q92993 513 aa5.17□□□□□ -1.58
VPS13D-203ENST00000466732 MRGPRX4Q96LA9 322 aa5.17□□□□□ -1.58
VPS13D-203ENST00000466732 ADAM2Q99965 735 aa5.17□□□□□ -1.58
VPS13D-203ENST00000466732 ZSWIM1Q9BR11 485 aa5.17□□□□□ -1.58
VPS13D-203ENST00000466732 IKZF4Q9H2S9 585 aa5.17□□□□□ -1.58
VPS13D-203ENST00000466732 GSTO2Q9H4Y5 243 aa5.17□□□□□ -1.58
VPS13D-203ENST00000466732 NIPSNAP3AQ9UFN0 247 aaPredicted RBP5.17□□□□□ -1.58
VPS13D-203ENST00000466732 PCDHB1Q9Y5F3 818 aa5.17□□□□□ -1.58
VPS13D-203ENST00000466732 hCG_2014768A0A024R1R8 64 aa5.16□□□□□ -1.58
VPS13D-203ENST00000466732 A0A087X1B8 175 aa5.16□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms