RNA–Protein interactions for RNA: ENST00000465591.1

LIME1-203, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

TSL 2

Gene LIME1, Length 680 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-203ENST00000465591 C18orf25Q96B23 403 aaPredicted RBP23.82■■□□□ 1.4
LIME1-203ENST00000465591 TTPALQ9BTX7 342 aa23.82■■□□□ 1.4
LIME1-203ENST00000465591 ZHX3Q9H4I2 956 aa23.82■■□□□ 1.4
LIME1-203ENST00000465591 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP23.82■■□□□ 1.4
LIME1-203ENST00000465591 CNTN3Q9P232 1028 aa23.82■■□□□ 1.4
LIME1-203ENST00000465591 TBX20Q9UMR3 447 aa23.82■■□□□ 1.4
LIME1-203ENST00000465591 SPDYE4A6NLX3 237 aa23.81■■□□□ 1.4
LIME1-203ENST00000465591 I3L4J1 428 aa23.81■■□□□ 1.4
LIME1-203ENST00000465591 ADAM12O43184 909 aa23.81■■□□□ 1.4
LIME1-203ENST00000465591 TRAK2O60296 914 aa23.81■■□□□ 1.4
LIME1-203ENST00000465591 KCNE1P15382 129 aa23.81■■□□□ 1.4
LIME1-203ENST00000465591 SLC39A4Q6P5W5 647 aa23.81■■□□□ 1.4
LIME1-203ENST00000465591 DCLRE1AQ6PJP8 1040 aa23.81■■□□□ 1.4
LIME1-203ENST00000465591 CLSTN3Q9BQT9 956 aa23.81■■□□□ 1.4
LIME1-203ENST00000465591 TFIP11Q9UBB9 837 aaKnown RBP23.81■■□□□ 1.4
LIME1-203ENST00000465591 STK17AQ9UEE5 414 aa23.81■■□□□ 1.4
LIME1-203ENST00000465591 MYMKA6NI61 221 aa23.8■■□□□ 1.4
LIME1-203ENST00000465591 PRR33A8MZF0 331 aa23.8■■□□□ 1.4
LIME1-203ENST00000465591 H0YCG3 227 aa23.8■■□□□ 1.4
LIME1-203ENST00000465591 CLDN3O15551 220 aa23.8■■□□□ 1.4
LIME1-203ENST00000465591 TBCAO75347 108 aaKnown RBP23.8■■□□□ 1.4
LIME1-203ENST00000465591 TNFSF9P41273 254 aa23.8■■□□□ 1.4
LIME1-203ENST00000465591 BRCC3P46736 316 aa23.8■■□□□ 1.4
LIME1-203ENST00000465591 PSMD5Q16401 504 aa23.8■■□□□ 1.4
LIME1-203ENST00000465591 ZBTB41Q5SVQ8 909 aa23.8■■□□□ 1.4
LIME1-203ENST00000465591 RRAGBQ5VZM2 374 aa23.8■■□□□ 1.4
LIME1-203ENST00000465591 DYMQ7RTS9 669 aa23.8■■□□□ 1.4
LIME1-203ENST00000465591 KRI1Q8N9T8 703 aaKnown RBP23.8■■□□□ 1.4
LIME1-203ENST00000465591 LINC00301Q8NCQ3 95 aa23.8■■□□□ 1.4
LIME1-203ENST00000465591 EDAQ92838 391 aa23.8■■□□□ 1.4
LIME1-203ENST00000465591 BICD1Q96G01 975 aa23.8■■□□□ 1.4
LIME1-203ENST00000465591 UROC1Q96N76 676 aa23.8■■□□□ 1.4
LIME1-203ENST00000465591 PANK2Q9BZ23 570 aa23.8■■□□□ 1.4
LIME1-203ENST00000465591 CCDC39Q9UFE4 941 aa23.8■■□□□ 1.4
LIME1-203ENST00000465591 DOCK8Q8NF50 2099 aa23.8■■□□□ 1.4
LIME1-203ENST00000465591 ZNF318Q5VUA4 2279 aa23.79■■□□□ 1.4
LIME1-203ENST00000465591 FAM189A1O60320 539 aa23.79■■□□□ 1.4
LIME1-203ENST00000465591 PIGRP01833 764 aa23.79■■□□□ 1.4
LIME1-203ENST00000465591 CXCL8P10145 99 aa23.79■■□□□ 1.4
LIME1-203ENST00000465591 FGFR3P22607 806 aa23.79■■□□□ 1.4
LIME1-203ENST00000465591 ZC2HC1CQ53FD0 456 aaPredicted RBP23.79■■□□□ 1.4
LIME1-203ENST00000465591 CMASQ8NFW8 434 aaPredicted RBP23.79■■□□□ 1.4
LIME1-203ENST00000465591 ZNF707Q96C28 371 aaPredicted RBP23.79■■□□□ 1.4
LIME1-203ENST00000465591 IKZF4Q9H2S9 585 aa23.79■■□□□ 1.4
LIME1-203ENST00000465591 NR2E1Q9Y466 385 aa23.79■■□□□ 1.4
LIME1-203ENST00000465591 ANK1P16157 1881 aa23.79■■□□□ 1.4
LIME1-203ENST00000465591 CCDC195A0A1B0GUA6 201 aa23.78■■□□□ 1.4
LIME1-203ENST00000465591 PODXLO00592 558 aa23.78■■□□□ 1.4
LIME1-203ENST00000465591 HNRNPDLO14979 420 aaKnown RBP23.78■■□□□ 1.4
LIME1-203ENST00000465591 TKTP29401 623 aaKnown RBP23.78■■□□□ 1.4
LIME1-203ENST00000465591 MATR3P43243 847 aaKnown RBP eCLIP23.78■■□□□ 1.4
LIME1-203ENST00000465591 LIG4P49917 911 aa23.78■■□□□ 1.4
LIME1-203ENST00000465591 ZXDAP98168 799 aa23.78■■□□□ 1.4
LIME1-203ENST00000465591 GTF2BQ00403 316 aa23.78■■□□□ 1.4
LIME1-203ENST00000465591 SPAG1Q07617 926 aa23.78■■□□□ 1.4
LIME1-203ENST00000465591 ELAVL2Q12926 359 aaKnown RBP23.78■■□□□ 1.4
LIME1-203ENST00000465591 PKP1Q13835 747 aa23.78■■□□□ 1.4
LIME1-203ENST00000465591 STK38Q15208 465 aa23.78■■□□□ 1.4
LIME1-203ENST00000465591 RSPO2Q6UXX9 243 aaPredicted RBP23.78■■□□□ 1.4
LIME1-203ENST00000465591 PDZRN4Q6ZMN7 1036 aaPredicted RBP23.78■■□□□ 1.4
LIME1-203ENST00000465591 C15orf39Q6ZRI6 1047 aa23.78■■□□□ 1.4
LIME1-203ENST00000465591 SFR1Q86XK3 245 aa23.78■■□□□ 1.4
LIME1-203ENST00000465591 SPRYD3Q8NCJ5 442 aa23.78■■□□□ 1.4
LIME1-203ENST00000465591 DDX12PQ92771 950 aa23.78■■□□□ 1.4
LIME1-203ENST00000465591 DNAJC19Q96DA6 116 aa23.78■■□□□ 1.4
LIME1-203ENST00000465591 SLC38A7Q9NVC3 462 aa23.78■■□□□ 1.4
LIME1-203ENST00000465591 TISP43B9A030 160 aa23.77■■□□□ 1.4
LIME1-203ENST00000465591 TXLNAP40222 546 aa23.77■■□□□ 1.4
LIME1-203ENST00000465591 CREMQ03060 361 aa23.77■■□□□ 1.4
LIME1-203ENST00000465591 PTPN21Q16825 1174 aa23.77■■□□□ 1.4
LIME1-203ENST00000465591 MAP4K3Q8IVH8 894 aa23.77■■□□□ 1.4
LIME1-203ENST00000465591 KREMEN2Q8NCW0 462 aa23.77■■□□□ 1.4
LIME1-203ENST00000465591 DDX27Q96GQ7 796 aaKnown RBP23.77■■□□□ 1.4
LIME1-203ENST00000465591 TUBGCP4Q9UGJ1 667 aa23.77■■□□□ 1.4
LIME1-203ENST00000465591 ZDBF2Q9HCK1 2354 aa23.77■■□□□ 1.4
LIME1-203ENST00000465591 TTC26A0AVF1 554 aa23.76■■□□□ 1.39
LIME1-203ENST00000465591 ANKRD63C9JTQ0 380 aa23.76■■□□□ 1.39
LIME1-203ENST00000465591 PAPLNO95428 1278 aa23.76■■□□□ 1.39
LIME1-203ENST00000465591 C1RP00736 705 aa23.76■■□□□ 1.39
LIME1-203ENST00000465591 CLTAP09496 248 aa23.76■■□□□ 1.39
LIME1-203ENST00000465591 FOXD4L6Q3SYB3 417 aaPredicted RBP23.76■■□□□ 1.39
LIME1-203ENST00000465591 FOXD4L3Q6VB84 417 aaPredicted RBP23.76■■□□□ 1.39
LIME1-203ENST00000465591 HFE2Q6ZVN8 426 aa23.76■■□□□ 1.39
LIME1-203ENST00000465591 TDRD5Q8NAT2 981 aaKnown RBP23.76■■□□□ 1.39
LIME1-203ENST00000465591 HDAC7Q8WUI4 952 aa23.76■■□□□ 1.39
LIME1-203ENST00000465591 PLEKHA4Q9H4M7 779 aa23.76■■□□□ 1.39
LIME1-203ENST00000465591 MTRRQ9UBK8 725 aa23.76■■□□□ 1.39
LIME1-203ENST00000465591 FBXW11Q9UKB1 542 aa23.76■■□□□ 1.39
LIME1-203ENST00000465591 A0A0B4J269 797 aa23.75■■□□□ 1.39
LIME1-203ENST00000465591 SPTLC2O15270 562 aa23.75■■□□□ 1.39
LIME1-203ENST00000465591 ASGR2P07307 311 aa23.75■■□□□ 1.39
LIME1-203ENST00000465591 ZSCAN22P10073 491 aaPredicted RBP23.75■■□□□ 1.39
LIME1-203ENST00000465591 STAT6P42226 847 aa23.75■■□□□ 1.39
LIME1-203ENST00000465591 ENOX2Q16206 610 aaKnown RBP23.75■■□□□ 1.39
LIME1-203ENST00000465591 CCDC73Q6ZRK6 1079 aa23.75■■□□□ 1.39
LIME1-203ENST00000465591 TRIM67Q6ZTA4 783 aa23.75■■□□□ 1.39
LIME1-203ENST00000465591 CCDC149Q6ZUS6 474 aa23.75■■□□□ 1.39
LIME1-203ENST00000465591 SV2BQ7L1I2 683 aa23.75■■□□□ 1.39
LIME1-203ENST00000465591 PDILTQ8N807 584 aa23.75■■□□□ 1.39
LIME1-203ENST00000465591 ZNF396Q96N95 335 aaPredicted RBP23.75■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms