RNA–Protein interactions for RNA: ENST00000464750.5

U2AF1-206, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 966 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-206ENST00000464750 FAM173BQ6P4H8 233 aa28.3■■■□□ 2.12
U2AF1-206ENST00000464750 PDXDC1Q6P996 788 aa28.3■■■□□ 2.12
U2AF1-206ENST00000464750 LILRA6Q6PI73 481 aa28.3■■■□□ 2.12
U2AF1-206ENST00000464750 CYP26C1Q6V0L0 522 aa28.3■■■□□ 2.12
U2AF1-206ENST00000464750 OTOP3Q7RTS5 596 aa28.3■■■□□ 2.12
U2AF1-206ENST00000464750 PBXIP1Q96AQ6 731 aa28.3■■■□□ 2.12
U2AF1-206ENST00000464750 ZMAT2Q96NC0 199 aaKnown RBP28.3■■■□□ 2.12
U2AF1-206ENST00000464750 RHOBTB2Q9BYZ6 727 aa28.3■■■□□ 2.12
U2AF1-206ENST00000464750 SLC38A7Q9NVC3 462 aa28.3■■■□□ 2.12
U2AF1-206ENST00000464750 CNTN3Q9P232 1028 aa28.3■■■□□ 2.12
U2AF1-206ENST00000464750 KRT18P05783 430 aaKnown RBP28.29■■■□□ 2.12
U2AF1-206ENST00000464750 ASGR2P07307 311 aa28.29■■■□□ 2.12
U2AF1-206ENST00000464750 KCNE1P15382 129 aa28.29■■■□□ 2.12
U2AF1-206ENST00000464750 MARCKSP29966 332 aaPredicted RBP28.29■■■□□ 2.12
U2AF1-206ENST00000464750 HAUS6Q7Z4H7 955 aa28.29■■■□□ 2.12
U2AF1-206ENST00000464750 C3orf58Q8NDZ4 430 aa28.29■■■□□ 2.12
U2AF1-206ENST00000464750 SMG7Q92540 1137 aaKnown RBP28.29■■■□□ 2.12
U2AF1-206ENST00000464750 LARP4BQ92615 738 aaKnown RBP28.29■■■□□ 2.12
U2AF1-206ENST00000464750 ZNF707Q96C28 371 aaPredicted RBP28.29■■■□□ 2.12
U2AF1-206ENST00000464750 ASIC4Q96FT7 647 aa28.29■■■□□ 2.12
U2AF1-206ENST00000464750 BICD1Q96G01 975 aa28.29■■■□□ 2.12
U2AF1-206ENST00000464750 CLSTN3Q9BQT9 956 aa28.29■■■□□ 2.12
U2AF1-206ENST00000464750 CCSER1Q9C0I3 900 aa28.29■■■□□ 2.12
U2AF1-206ENST00000464750 ZDHHC7Q9NXF8 308 aa28.29■■■□□ 2.12
U2AF1-206ENST00000464750 LIMD1Q9UGP4 676 aa28.29■■■□□ 2.12
U2AF1-206ENST00000464750 KMT2EQ8IZD2 1858 aa28.29■■■□□ 2.12
U2AF1-206ENST00000464750 ZDBF2Q9HCK1 2354 aa28.29■■■□□ 2.12
U2AF1-206ENST00000464750 CLUHO75153 1309 aa28.28■■■□□ 2.12
U2AF1-206ENST00000464750 K7ENM7 598 aa28.28■■■□□ 2.12
U2AF1-206ENST00000464750 FGFR3P22607 806 aa28.28■■■□□ 2.12
U2AF1-206ENST00000464750 MATR3P43243 847 aaKnown RBP eCLIP28.28■■■□□ 2.12
U2AF1-206ENST00000464750 SEZ6Q53EL9 994 aa28.28■■■□□ 2.12
U2AF1-206ENST00000464750 CD300LGQ6UXG3 332 aa28.28■■■□□ 2.12
U2AF1-206ENST00000464750 MYCT1Q8N699 235 aa28.28■■■□□ 2.12
U2AF1-206ENST00000464750 KCNN1Q92952 543 aa28.28■■■□□ 2.12
U2AF1-206ENST00000464750 PARVGQ9HBI0 331 aa28.28■■■□□ 2.12
U2AF1-206ENST00000464750 WDR6Q9NNW5 1121 aaKnown RBP28.28■■■□□ 2.12
U2AF1-206ENST00000464750 FBXO2Q9UK22 296 aaPredicted RBP28.28■■■□□ 2.12
U2AF1-206ENST00000464750 FBXW11Q9UKB1 542 aa28.28■■■□□ 2.12
U2AF1-206ENST00000464750 DOCK8Q8NF50 2099 aa28.28■■■□□ 2.12
U2AF1-206ENST00000464750 CLDN3O15551 220 aa28.27■■■□□ 2.12
U2AF1-206ENST00000464750 MEFVO15553 781 aaPredicted RBP28.27■■■□□ 2.12
U2AF1-206ENST00000464750 PAPLNO95428 1278 aa28.27■■■□□ 2.12
U2AF1-206ENST00000464750 ZNF131P52739 623 aa28.27■■■□□ 2.12
U2AF1-206ENST00000464750 MCL1Q07820 350 aa28.27■■■□□ 2.12
U2AF1-206ENST00000464750 SPECC1Q5M775 1068 aa28.27■■■□□ 2.12
U2AF1-206ENST00000464750 USP49Q70CQ1 688 aa28.27■■■□□ 2.12
U2AF1-206ENST00000464750 DDX27Q96GQ7 796 aaKnown RBP28.27■■■□□ 2.12
U2AF1-206ENST00000464750 EPSTI1Q96J88 318 aa28.27■■■□□ 2.12
U2AF1-206ENST00000464750 PIDD1Q9HB75 910 aa28.27■■■□□ 2.12
U2AF1-206ENST00000464750 MTMR6Q9Y217 621 aa28.27■■■□□ 2.12
U2AF1-206ENST00000464750 I3L4J1 428 aa28.26■■■□□ 2.11
U2AF1-206ENST00000464750 PODXLO00592 558 aa28.26■■■□□ 2.11
U2AF1-206ENST00000464750 ADAM12O43184 909 aa28.26■■■□□ 2.11
U2AF1-206ENST00000464750 TRAPPC3O43617 180 aa28.26■■■□□ 2.11
U2AF1-206ENST00000464750 TBCAO75347 108 aaKnown RBP28.26■■■□□ 2.11
U2AF1-206ENST00000464750 ZMYND10O75800 440 aa28.26■■■□□ 2.11
U2AF1-206ENST00000464750 BRCC3P46736 316 aa28.26■■■□□ 2.11
U2AF1-206ENST00000464750 CEBPZQ03701 1054 aaKnown RBP28.26■■■□□ 2.11
U2AF1-206ENST00000464750 SUGP1Q8IWZ8 645 aaKnown RBP28.26■■■□□ 2.11
U2AF1-206ENST00000464750 UBALD2Q8IYN6 164 aa28.26■■■□□ 2.11
U2AF1-206ENST00000464750 STAMQ92783 540 aa28.26■■■□□ 2.11
U2AF1-206ENST00000464750 SMOC2Q9H3U7 446 aa28.26■■■□□ 2.11
U2AF1-206ENST00000464750 ZHX3Q9H4I2 956 aa28.26■■■□□ 2.11
U2AF1-206ENST00000464750 MTRRQ9UBK8 725 aa28.26■■■□□ 2.11
U2AF1-206ENST00000464750 DOCK6Q96HP0 2047 aa28.25■■■□□ 2.11
U2AF1-206ENST00000464750 TKTP29401 623 aaKnown RBP28.25■■■□□ 2.11
U2AF1-206ENST00000464750 LIG4P49917 911 aa28.25■■■□□ 2.11
U2AF1-206ENST00000464750 LIN9Q5TKA1 542 aa28.25■■■□□ 2.11
U2AF1-206ENST00000464750 C18orf25Q96B23 403 aaPredicted RBP28.25■■■□□ 2.11
U2AF1-206ENST00000464750 PRKD2Q9BZL6 878 aa28.25■■■□□ 2.11
U2AF1-206ENST00000464750 HAPLN2Q9GZV7 340 aa28.25■■■□□ 2.11
U2AF1-206ENST00000464750 TBX20Q9UMR3 447 aa28.25■■■□□ 2.11
U2AF1-206ENST00000464750 SRPRBQ9Y5M8 271 aaKnown RBP28.25■■■□□ 2.11
U2AF1-206ENST00000464750 TRAK2O60296 914 aa28.24■■■□□ 2.11
U2AF1-206ENST00000464750 CXCL8P10145 99 aa28.24■■■□□ 2.11
U2AF1-206ENST00000464750 SCP2P22307 547 aa28.24■■■□□ 2.11
U2AF1-206ENST00000464750 SLC10A6Q3KNW5 377 aa28.24■■■□□ 2.11
U2AF1-206ENST00000464750 FBXL6Q8N531 539 aa28.24■■■□□ 2.11
U2AF1-206ENST00000464750 CLIC6Q96NY7 704 aa28.24■■■□□ 2.11
U2AF1-206ENST00000464750 CCDC39Q9UFE4 941 aa28.24■■■□□ 2.11
U2AF1-206ENST00000464750 HNRNPDLO14979 420 aaKnown RBP28.23■■■□□ 2.11
U2AF1-206ENST00000464750 STX6O43752 255 aa28.23■■■□□ 2.11
U2AF1-206ENST00000464750 N4BP1O75113 896 aaKnown RBP28.23■■■□□ 2.11
U2AF1-206ENST00000464750 GBP2P32456 591 aaPredicted RBP28.23■■■□□ 2.11
U2AF1-206ENST00000464750 DDIT3P35638 169 aa28.23■■■□□ 2.11
U2AF1-206ENST00000464750 USP28Q96RU2 1077 aa28.23■■■□□ 2.11
U2AF1-206ENST00000464750 KCNH6Q9H252 994 aa28.23■■■□□ 2.11
U2AF1-206ENST00000464750 STK17AQ9UEE5 414 aa28.23■■■□□ 2.11
U2AF1-206ENST00000464750 PIGRP01833 764 aa28.22■■■□□ 2.11
U2AF1-206ENST00000464750 C8AP07357 584 aa28.22■■■□□ 2.11
U2AF1-206ENST00000464750 CLTAP09496 248 aa28.22■■■□□ 2.11
U2AF1-206ENST00000464750 RPL9P32969 192 aaKnown RBP28.22■■■□□ 2.11
U2AF1-206ENST00000464750 OR1D2P34982 312 aa28.22■■■□□ 2.11
U2AF1-206ENST00000464750 TXLNAP40222 546 aa28.22■■■□□ 2.11
U2AF1-206ENST00000464750 RAB33AQ14088 237 aa28.22■■■□□ 2.11
U2AF1-206ENST00000464750 ANKS3Q6ZW76 656 aa28.22■■■□□ 2.11
U2AF1-206ENST00000464750 FIZ1Q96SL8 496 aa28.22■■■□□ 2.11
U2AF1-206ENST00000464750 ZSCAN16Q9H4T2 348 aaPredicted RBP28.22■■■□□ 2.11
U2AF1-206ENST00000464750 TUBGCP4Q9UGJ1 667 aa28.22■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms