RNA–Protein interactions for RNA: ENST00000463041.1

PTPRF-210, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 3

Gene PTPRF, Length 298 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-210ENST00000463041 HAUS6Q7Z4H7 955 aa7.97□□□□□ -1.13
PTPRF-210ENST00000463041 SUGP1Q8IWZ8 645 aaKnown RBP7.97□□□□□ -1.13
PTPRF-210ENST00000463041 MYCT1Q8N699 235 aa7.97□□□□□ -1.13
PTPRF-210ENST00000463041 HASPINQ8TF76 798 aa7.97□□□□□ -1.13
PTPRF-210ENST00000463041 SMG7Q92540 1137 aaKnown RBP7.97□□□□□ -1.13
PTPRF-210ENST00000463041 ASIC4Q96FT7 647 aa7.97□□□□□ -1.13
PTPRF-210ENST00000463041 ZBTB45Q96K62 511 aaPredicted RBP7.97□□□□□ -1.13
PTPRF-210ENST00000463041 B3GALT6Q96L58 329 aa7.97□□□□□ -1.13
PTPRF-210ENST00000463041 TSPAN18Q96SJ8 248 aa7.97□□□□□ -1.13
PTPRF-210ENST00000463041 PRKD2Q9BZL6 878 aa7.97□□□□□ -1.13
PTPRF-210ENST00000463041 PLEKHA5Q9HAU0 1116 aa7.97□□□□□ -1.13
PTPRF-210ENST00000463041 PIDD1Q9HB75 910 aa7.97□□□□□ -1.13
PTPRF-210ENST00000463041 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP7.97□□□□□ -1.13
PTPRF-210ENST00000463041 IGSF9Q9P2J2 1179 aa7.97□□□□□ -1.13
PTPRF-210ENST00000463041 CACNG4Q9UBN1 327 aa7.97□□□□□ -1.13
PTPRF-210ENST00000463041 SRPRBQ9Y5M8 271 aaKnown RBP7.97□□□□□ -1.13
PTPRF-210ENST00000463041 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.97□□□□□ -1.13
PTPRF-210ENST00000463041 BACE2Q9Y5Z0 518 aa7.97□□□□□ -1.13
PTPRF-210ENST00000463041 DENND4AQ7Z401 1863 aa7.97□□□□□ -1.13
PTPRF-210ENST00000463041 PDCD11Q14690 1871 aaKnown RBP7.96□□□□□ -1.13
PTPRF-210ENST00000463041 NPHP3-ACAD11A0A0J9YXS1 232 aa7.96□□□□□ -1.14
PTPRF-210ENST00000463041 RFPL2O75678 378 aa7.96□□□□□ -1.14
PTPRF-210ENST00000463041 FAM13AO94988 1023 aa7.96□□□□□ -1.14
PTPRF-210ENST00000463041 CLTAP09496 248 aa7.96□□□□□ -1.14
PTPRF-210ENST00000463041 HNRNPA1P09651 372 aaKnown RBP eCLIP7.96□□□□□ -1.14
PTPRF-210ENST00000463041 PDIA4P13667 645 aaKnown RBP7.96□□□□□ -1.14
PTPRF-210ENST00000463041 OR1D2P34982 312 aa7.96□□□□□ -1.14
PTPRF-210ENST00000463041 ZNF131P52739 623 aa7.96□□□□□ -1.14
PTPRF-210ENST00000463041 NUBP1P53384 320 aa7.96□□□□□ -1.14
PTPRF-210ENST00000463041 NCKAP1LP55160 1127 aa7.96□□□□□ -1.14
PTPRF-210ENST00000463041 OSTNP61366 133 aa7.96□□□□□ -1.14
PTPRF-210ENST00000463041 TDGQ13569 410 aa7.96□□□□□ -1.14
PTPRF-210ENST00000463041 DHX8Q14562 1220 aaKnown RBP7.96□□□□□ -1.14
PTPRF-210ENST00000463041 MCM6Q14566 821 aa7.96□□□□□ -1.14
PTPRF-210ENST00000463041 NOLC1Q14978 699 aaKnown RBP eCLIP7.96□□□□□ -1.14
PTPRF-210ENST00000463041 PTPAQ15257 358 aa7.96□□□□□ -1.14
PTPRF-210ENST00000463041 SLC10A6Q3KNW5 377 aa7.96□□□□□ -1.14
PTPRF-210ENST00000463041 GLRA4Q5JXX5 417 aa7.96□□□□□ -1.14
PTPRF-210ENST00000463041 CD300LGQ6UXG3 332 aa7.96□□□□□ -1.14
PTPRF-210ENST00000463041 ANKS3Q6ZW76 656 aa7.96□□□□□ -1.14
PTPRF-210ENST00000463041 GPBP1Q86WP2 473 aa7.96□□□□□ -1.14
PTPRF-210ENST00000463041 GLYCTKQ8IVS8 523 aa7.96□□□□□ -1.14
PTPRF-210ENST00000463041 CEP120Q8N960 986 aa7.96□□□□□ -1.14
PTPRF-210ENST00000463041 RASSF8Q8NHQ8 419 aa7.96□□□□□ -1.14
PTPRF-210ENST00000463041 RAD54LQ92698 747 aa7.96□□□□□ -1.14
PTPRF-210ENST00000463041 ZNF707Q96C28 371 aaPredicted RBP7.96□□□□□ -1.14
PTPRF-210ENST00000463041 ZMAT2Q96NC0 199 aaKnown RBP7.96□□□□□ -1.14
PTPRF-210ENST00000463041 ZSCAN16Q9H4T2 348 aaPredicted RBP7.96□□□□□ -1.14
PTPRF-210ENST00000463041 KCNK12Q9HB15 430 aa7.96□□□□□ -1.14
PTPRF-210ENST00000463041 PARVGQ9HBI0 331 aa7.96□□□□□ -1.14
PTPRF-210ENST00000463041 BLOC1S4Q9NUP1 217 aa7.96□□□□□ -1.14
PTPRF-210ENST00000463041 CNTN3Q9P232 1028 aa7.96□□□□□ -1.14
PTPRF-210ENST00000463041 EPS15L1Q9UBC2 864 aa7.96□□□□□ -1.14
PTPRF-210ENST00000463041 CCDC39Q9UFE4 941 aa7.96□□□□□ -1.14
PTPRF-210ENST00000463041 TBX20Q9UMR3 447 aa7.96□□□□□ -1.14
PTPRF-210ENST00000463041 CLIC4Q9Y696 253 aa7.96□□□□□ -1.14
PTPRF-210ENST00000463041 ZFP37Q9Y6Q3 630 aaPredicted RBP7.96□□□□□ -1.14
PTPRF-210ENST00000463041 MORC2Q9Y6X9 1032 aaPredicted RBP7.96□□□□□ -1.14
PTPRF-210ENST00000463041 NOTCH4Q99466 2003 aa7.95□□□□□ -1.14
PTPRF-210ENST00000463041 PTPRZ1P23471 2315 aaPredicted RBP7.95□□□□□ -1.14
PTPRF-210ENST00000463041 H7C4K7 107 aa7.95□□□□□ -1.14
PTPRF-210ENST00000463041 PODXLO00592 558 aa7.95□□□□□ -1.14
PTPRF-210ENST00000463041 SYN3O14994 580 aa7.95□□□□□ -1.14
PTPRF-210ENST00000463041 XPOTO43592 962 aaKnown RBP7.95□□□□□ -1.14
PTPRF-210ENST00000463041 TRAK2O60296 914 aa7.95□□□□□ -1.14
PTPRF-210ENST00000463041 XYLBO75191 536 aa7.95□□□□□ -1.14
PTPRF-210ENST00000463041 PIGRP01833 764 aa7.95□□□□□ -1.14
PTPRF-210ENST00000463041 KRT18P05783 430 aaKnown RBP7.95□□□□□ -1.14
PTPRF-210ENST00000463041 ASGR2P07307 311 aa7.95□□□□□ -1.14
PTPRF-210ENST00000463041 POU2F2P09086 479 aa7.95□□□□□ -1.14
PTPRF-210ENST00000463041 MYBP10242 640 aa7.95□□□□□ -1.14
PTPRF-210ENST00000463041 PLCG1P19174 1290 aa7.95□□□□□ -1.14
PTPRF-210ENST00000463041 IGFBP6P24592 240 aaPredicted RBP7.95□□□□□ -1.14
PTPRF-210ENST00000463041 AVPR2P30518 371 aa7.95□□□□□ -1.14
PTPRF-210ENST00000463041 HOXA9P31269 272 aa7.95□□□□□ -1.14
PTPRF-210ENST00000463041 HOXD11P31277 338 aaPredicted RBP7.95□□□□□ -1.14
PTPRF-210ENST00000463041 GBP2P32456 591 aaPredicted RBP7.95□□□□□ -1.14
PTPRF-210ENST00000463041 MATR3P43243 847 aaKnown RBP eCLIP7.95□□□□□ -1.14
PTPRF-210ENST00000463041 GTF2BQ00403 316 aa7.95□□□□□ -1.14
PTPRF-210ENST00000463041 GRIN1Q05586 938 aa7.95□□□□□ -1.14
PTPRF-210ENST00000463041 SOX4Q06945 474 aaPredicted RBP7.95□□□□□ -1.14
PTPRF-210ENST00000463041 RESTQ13127 1097 aa7.95□□□□□ -1.14
PTPRF-210ENST00000463041 MRPL58Q14197 206 aaKnown RBP7.95□□□□□ -1.14
PTPRF-210ENST00000463041 KARSQ15046 597 aaKnown RBP7.95□□□□□ -1.14
PTPRF-210ENST00000463041 ZBTB6Q15916 424 aa7.95□□□□□ -1.14
PTPRF-210ENST00000463041 PPM1LQ5SGD2 360 aa7.95□□□□□ -1.14
PTPRF-210ENST00000463041 AXDND1Q5T1B0 1012 aaPredicted RBP7.95□□□□□ -1.14
PTPRF-210ENST00000463041 LIN9Q5TKA1 542 aa7.95□□□□□ -1.14
PTPRF-210ENST00000463041 CD302Q8IX05 232 aa7.95□□□□□ -1.14
PTPRF-210ENST00000463041 KRI1Q8N9T8 703 aaKnown RBP7.95□□□□□ -1.14
PTPRF-210ENST00000463041 FEZF2Q8TBJ5 459 aa7.95□□□□□ -1.14
PTPRF-210ENST00000463041 LARP4BQ92615 738 aaKnown RBP7.95□□□□□ -1.14
PTPRF-210ENST00000463041 BICD1Q96G01 975 aa7.95□□□□□ -1.14
PTPRF-210ENST00000463041 EPSTI1Q96J88 318 aa7.95□□□□□ -1.14
PTPRF-210ENST00000463041 SNX27Q96L92 541 aa7.95□□□□□ -1.14
PTPRF-210ENST00000463041 REEP2Q9BRK0 252 aa7.95□□□□□ -1.14
PTPRF-210ENST00000463041 IRF2BPLQ9H1B7 796 aa7.95□□□□□ -1.14
PTPRF-210ENST00000463041 ST6GALNAC4Q9H4F1 302 aa7.95□□□□□ -1.14
PTPRF-210ENST00000463041 MTRRQ9UBK8 725 aa7.95□□□□□ -1.14
PTPRF-210ENST00000463041 FBXW11Q9UKB1 542 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms