RNA–Protein interactions for RNA: ENST00000461239.2

ECHDC1-212, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 617 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-212ENST00000461239 GPR27Q9NS67 375 aa9.25□□□□□ -0.93
ECHDC1-212ENST00000461239 SEMA3GQ9NS98 782 aa9.25□□□□□ -0.93
ECHDC1-212ENST00000461239 CLEC1BQ9P126 229 aa9.25□□□□□ -0.93
ECHDC1-212ENST00000461239 MCM8Q9UJA3 840 aa9.25□□□□□ -0.93
ECHDC1-212ENST00000461239 TCFL5Q9UL49 500 aa9.25□□□□□ -0.93
ECHDC1-212ENST00000461239 SMCHD1A6NHR9 2005 aa9.25□□□□□ -0.93
ECHDC1-212ENST00000461239 ERICH2A1L162 156 aa9.24□□□□□ -0.93
ECHDC1-212ENST00000461239 WDR64B1ANS9 1081 aa9.24□□□□□ -0.93
ECHDC1-212ENST00000461239 KLRF2D3W0D1 207 aa9.24□□□□□ -0.93
ECHDC1-212ENST00000461239 PPP1R11O60927 126 aaPredicted RBP9.24□□□□□ -0.93
ECHDC1-212ENST00000461239 COBLO75128 1261 aa9.24□□□□□ -0.93
ECHDC1-212ENST00000461239 ZBED4O75132 1171 aa9.24□□□□□ -0.93
ECHDC1-212ENST00000461239 NPTXRO95502 500 aa9.24□□□□□ -0.93
ECHDC1-212ENST00000461239 PARP1P09874 1014 aaKnown RBP9.24□□□□□ -0.93
ECHDC1-212ENST00000461239 JMJD7P0C870 316 aa9.24□□□□□ -0.93
ECHDC1-212ENST00000461239 MAPK4P31152 587 aa9.24□□□□□ -0.93
ECHDC1-212ENST00000461239 PCBP3P57721 371 aaKnown RBP9.24□□□□□ -0.93
ECHDC1-212ENST00000461239 GPR85P60893 370 aa9.24□□□□□ -0.93
ECHDC1-212ENST00000461239 GRB14Q14449 540 aa9.24□□□□□ -0.93
ECHDC1-212ENST00000461239 SART3Q15020 963 aaKnown RBP9.24□□□□□ -0.93
ECHDC1-212ENST00000461239 ASPRV1Q53RT3 343 aa9.24□□□□□ -0.93
ECHDC1-212ENST00000461239 MUM1L1Q5H9M0 696 aa9.24□□□□□ -0.93
ECHDC1-212ENST00000461239 SNRNP48Q6IEG0 339 aaKnown RBP9.24□□□□□ -0.93
ECHDC1-212ENST00000461239 CCDC174Q6PII3 467 aa9.24□□□□□ -0.93
ECHDC1-212ENST00000461239 APOA5Q6Q788 366 aa9.24□□□□□ -0.93
ECHDC1-212ENST00000461239 BLOC1S2Q6QNY1 142 aa9.24□□□□□ -0.93
ECHDC1-212ENST00000461239 RUFY3Q7L099 469 aa9.24□□□□□ -0.93
ECHDC1-212ENST00000461239 PLEKHH3Q7Z736 793 aa9.24□□□□□ -0.93
ECHDC1-212ENST00000461239 CPXCR1Q8N123 301 aa9.24□□□□□ -0.93
ECHDC1-212ENST00000461239 LEO1Q8WVC0 666 aaPredicted RBP9.24□□□□□ -0.93
ECHDC1-212ENST00000461239 MAP3K14Q99558 947 aa9.24□□□□□ -0.93
ECHDC1-212ENST00000461239 OSBPL1AQ9BXW6 950 aa9.24□□□□□ -0.93
ECHDC1-212ENST00000461239 FOXP3Q9BZS1 431 aa9.24□□□□□ -0.93
ECHDC1-212ENST00000461239 RIOX1Q9H6W3 641 aa9.24□□□□□ -0.93
ECHDC1-212ENST00000461239 FLRT1Q9NZU1 646 aa9.24□□□□□ -0.93
ECHDC1-212ENST00000461239 ISY1Q9ULR0 285 aaKnown RBP9.24□□□□□ -0.93
ECHDC1-212ENST00000461239 ARVCFO00192 962 aa9.23□□□□□ -0.93
ECHDC1-212ENST00000461239 MSCO60682 206 aa9.23□□□□□ -0.93
ECHDC1-212ENST00000461239 KPNA6O60684 536 aa9.23□□□□□ -0.93
ECHDC1-212ENST00000461239 PLEKHA8P1O95397 391 aa9.23□□□□□ -0.93
ECHDC1-212ENST00000461239 SLC25A27O95847 323 aa9.23□□□□□ -0.93
ECHDC1-212ENST00000461239 IGLV1-40P01703 118 aa9.23□□□□□ -0.93
ECHDC1-212ENST00000461239 ICAM1P05362 532 aa9.23□□□□□ -0.93
ECHDC1-212ENST00000461239 GSTM1P09488 218 aa9.23□□□□□ -0.93
ECHDC1-212ENST00000461239 LCP1P13796 627 aa9.23□□□□□ -0.93
ECHDC1-212ENST00000461239 LTBRP36941 435 aa9.23□□□□□ -0.93
ECHDC1-212ENST00000461239 OAZ1P54368 228 aa9.23□□□□□ -0.93
ECHDC1-212ENST00000461239 EVCP57679 992 aa9.23□□□□□ -0.93
ECHDC1-212ENST00000461239 CCNA1P78396 465 aa9.23□□□□□ -0.93
ECHDC1-212ENST00000461239 IKQ13123 557 aaPredicted RBP9.23□□□□□ -0.93
ECHDC1-212ENST00000461239 KCNAB2Q13303 367 aa9.23□□□□□ -0.93
ECHDC1-212ENST00000461239 PKN2Q16513 984 aaKnown RBP9.23□□□□□ -0.93
ECHDC1-212ENST00000461239 CCL14Q16627 93 aa9.23□□□□□ -0.93
ECHDC1-212ENST00000461239 CPSF6Q16630 551 aaKnown RBP eCLIP9.23□□□□□ -0.93
ECHDC1-212ENST00000461239 ZCCHC8Q6NZY4 707 aaKnown RBP9.23□□□□□ -0.93
ECHDC1-212ENST00000461239 ABHD17CQ6PCB6 329 aa9.23□□□□□ -0.93
ECHDC1-212ENST00000461239 CATIPQ7Z7H3 387 aa9.23□□□□□ -0.93
ECHDC1-212ENST00000461239 FERMT3Q86UX7 667 aa9.23□□□□□ -0.93
ECHDC1-212ENST00000461239 KSR1Q8IVT5 923 aa9.23□□□□□ -0.93
ECHDC1-212ENST00000461239 TMTC2Q8N394 836 aa9.23□□□□□ -0.93
ECHDC1-212ENST00000461239 SRBD1Q8N5C6 995 aaKnown RBP9.23□□□□□ -0.93
ECHDC1-212ENST00000461239 NUP133Q8WUM0 1156 aa9.23□□□□□ -0.93
ECHDC1-212ENST00000461239 COA7Q96BR5 231 aa9.23□□□□□ -0.93
ECHDC1-212ENST00000461239 TEX13BQ9BXU2 312 aa9.23□□□□□ -0.93
ECHDC1-212ENST00000461239 MROH8Q9H579 483 aa9.23□□□□□ -0.93
ECHDC1-212ENST00000461239 VAT1LQ9HCJ6 419 aa9.23□□□□□ -0.93
ECHDC1-212ENST00000461239 PCDHA8Q9Y5H6 950 aa9.23□□□□□ -0.93
ECHDC1-212ENST00000461239 BAZ2BQ9UIF8 2168 aaKnown RBP9.22□□□□□ -0.93
ECHDC1-212ENST00000461239 KLF18A0A0U1RQI7 1052 aa9.22□□□□□ -0.93
ECHDC1-212ENST00000461239 KRTAP9-6A0A140TA67 174 aa9.22□□□□□ -0.93
ECHDC1-212ENST00000461239 CCDC69A6NI79 296 aa9.22□□□□□ -0.93
ECHDC1-212ENST00000461239 SLC15A5A6NIM6 579 aa9.22□□□□□ -0.93
ECHDC1-212ENST00000461239 FGF10O15520 208 aaPredicted RBP9.22□□□□□ -0.93
ECHDC1-212ENST00000461239 MARCH6O60337 910 aa9.22□□□□□ -0.93
ECHDC1-212ENST00000461239 PGK2P07205 417 aa9.22□□□□□ -0.93
ECHDC1-212ENST00000461239 HOXC6P09630 235 aa9.22□□□□□ -0.93
ECHDC1-212ENST00000461239 CYP2B6P20813 491 aa9.22□□□□□ -0.93
ECHDC1-212ENST00000461239 PSMA5P28066 241 aa9.22□□□□□ -0.93
ECHDC1-212ENST00000461239 HOXD10P28358 340 aa9.22□□□□□ -0.93
ECHDC1-212ENST00000461239 ADORA2AP29274 412 aa9.22□□□□□ -0.93
ECHDC1-212ENST00000461239 PMLP29590 882 aa9.22□□□□□ -0.93
ECHDC1-212ENST00000461239 NEK4P51957 841 aa9.22□□□□□ -0.93
ECHDC1-212ENST00000461239 PRMT2P55345 433 aa9.22□□□□□ -0.93
ECHDC1-212ENST00000461239 GUCY1A3Q02108 690 aa9.22□□□□□ -0.93
ECHDC1-212ENST00000461239 CDC37Q16543 378 aaPredicted RBP9.22□□□□□ -0.93
ECHDC1-212ENST00000461239 QRICH1Q2TAL8 776 aa9.22□□□□□ -0.93
ECHDC1-212ENST00000461239 WDR78Q5VTH9 848 aa9.22□□□□□ -0.93
ECHDC1-212ENST00000461239 NFXL1Q6ZNB6 911 aa9.22□□□□□ -0.93
ECHDC1-212ENST00000461239 MTDHQ86UE4 582 aaKnown RBP9.22□□□□□ -0.93
ECHDC1-212ENST00000461239 ABRAQ8N0Z2 381 aa9.22□□□□□ -0.93
ECHDC1-212ENST00000461239 PLD6Q8N2A8 252 aaKnown RBP9.22□□□□□ -0.93
ECHDC1-212ENST00000461239 FANCBQ8NB91 859 aa9.22□□□□□ -0.93
ECHDC1-212ENST00000461239 PUM2Q8TB72 1066 aaKnown RBP eCLIP9.22□□□□□ -0.93
ECHDC1-212ENST00000461239 CLEC4DQ8WXI8 215 aa9.22□□□□□ -0.93
ECHDC1-212ENST00000461239 TRIB2Q92519 343 aa9.22□□□□□ -0.93
ECHDC1-212ENST00000461239 UBE2FQ969M7 185 aa9.22□□□□□ -0.93
ECHDC1-212ENST00000461239 ABHD8Q96I13 439 aa9.22□□□□□ -0.93
ECHDC1-212ENST00000461239 MMP19Q99542 508 aa9.22□□□□□ -0.93
ECHDC1-212ENST00000461239 AP5S1Q9NUS5 200 aa9.22□□□□□ -0.93
ECHDC1-212ENST00000461239 ASTN1O14525 1302 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms