RNA–Protein interactions for RNA: ENST00000460616.5

SSR4-206, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 2

Gene SSR4, Length 2,482 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-206ENST00000460616 LRRN2O75325 713 aa16.5■□□□□ 0.23
SSR4-206ENST00000460616 RSPH10BP0C881 870 aa16.5■□□□□ 0.23
SSR4-206ENST00000460616 CHRNB2P17787 502 aa16.5■□□□□ 0.23
SSR4-206ENST00000460616 TCEAL1Q15170 157 aa16.5■□□□□ 0.23
SSR4-206ENST00000460616 LLGL1Q15334 1064 aa16.5■□□□□ 0.23
SSR4-206ENST00000460616 KHDC1Q4VXA5 237 aaKnown RBP16.5■□□□□ 0.23
SSR4-206ENST00000460616 SLC20A1Q8WUM9 679 aa16.5■□□□□ 0.23
SSR4-206ENST00000460616 C1orf54Q8WWF1 131 aa16.5■□□□□ 0.23
SSR4-206ENST00000460616 EZH1Q92800 747 aaPredicted RBP16.5■□□□□ 0.23
SSR4-206ENST00000460616 SNF8Q96H20 258 aa16.5■□□□□ 0.23
SSR4-206ENST00000460616 FGD4Q96M96 766 aa16.5■□□□□ 0.23
SSR4-206ENST00000460616 NAP1L4Q99733 375 aaKnown RBP16.5■□□□□ 0.23
SSR4-206ENST00000460616 INTS2Q9H0H0 1204 aaKnown RBP16.5■□□□□ 0.23
SSR4-206ENST00000460616 PSTPIP2Q9H939 334 aa16.5■□□□□ 0.23
SSR4-206ENST00000460616 NINJ2Q9NZG7 142 aa16.5■□□□□ 0.23
SSR4-206ENST00000460616 CDK5RAP2Q96SN8 1893 aa16.5■□□□□ 0.23
SSR4-206ENST00000460616 SPOPO43791 374 aa16.5■□□□□ 0.23
SSR4-206ENST00000460616 GSTA2P09210 222 aa16.5■□□□□ 0.23
SSR4-206ENST00000460616 SKIP12755 728 aa16.5■□□□□ 0.23
SSR4-206ENST00000460616 PTPN4P29074 926 aa16.5■□□□□ 0.23
SSR4-206ENST00000460616 ITGA8P53708 1063 aa16.5■□□□□ 0.23
SSR4-206ENST00000460616 CBWD6Q4V339 395 aa16.5■□□□□ 0.23
SSR4-206ENST00000460616 CBWD3Q5JTY5 395 aa16.5■□□□□ 0.23
SSR4-206ENST00000460616 CBWD5Q5RIA9 395 aa16.5■□□□□ 0.23
SSR4-206ENST00000460616 PPP1R18Q6NYC8 613 aa16.5■□□□□ 0.23
SSR4-206ENST00000460616 KIAA0825Q8IV33 1275 aa16.5■□□□□ 0.23
SSR4-206ENST00000460616 CD101Q93033 1021 aa16.5■□□□□ 0.23
SSR4-206ENST00000460616 TRAPPC9Q96Q05 1148 aa16.5■□□□□ 0.23
SSR4-206ENST00000460616 EPAS1Q99814 870 aa16.5■□□□□ 0.23
SSR4-206ENST00000460616 PPP1R12CQ9BZL4 782 aa16.5■□□□□ 0.23
SSR4-206ENST00000460616 ZCWPW1Q9H0M4 648 aa16.5■□□□□ 0.23
SSR4-206ENST00000460616 BCAS3Q9H6U6 928 aa16.5■□□□□ 0.23
SSR4-206ENST00000460616 SLCO1B3Q9NPD5 702 aa16.5■□□□□ 0.23
SSR4-206ENST00000460616 ASMTLO95671 621 aa16.49■□□□□ 0.23
SSR4-206ENST00000460616 DLATP10515 647 aaKnown RBP16.49■□□□□ 0.23
SSR4-206ENST00000460616 SCNN1DP51172 638 aa16.49■□□□□ 0.23
SSR4-206ENST00000460616 PPP4CP60510 307 aa16.49■□□□□ 0.23
SSR4-206ENST00000460616 CUL3Q13618 768 aa16.49■□□□□ 0.23
SSR4-206ENST00000460616 RCN2Q14257 317 aa16.49■□□□□ 0.23
SSR4-206ENST00000460616 ASPRV1Q53RT3 343 aa16.49■□□□□ 0.23
SSR4-206ENST00000460616 TMEM63BQ5T3F8 832 aa16.49■□□□□ 0.23
SSR4-206ENST00000460616 STRIP1Q5VSL9 837 aa16.49■□□□□ 0.23
SSR4-206ENST00000460616 SPOCK2Q92563 424 aa16.49■□□□□ 0.23
SSR4-206ENST00000460616 SLCO2A1Q92959 643 aa16.49■□□□□ 0.23
SSR4-206ENST00000460616 IFT43Q96FT9 208 aa16.49■□□□□ 0.23
SSR4-206ENST00000460616 IKZF4Q9H2S9 585 aa16.49■□□□□ 0.23
SSR4-206ENST00000460616 JMJD4Q9H9V9 463 aa16.49■□□□□ 0.23
SSR4-206ENST00000460616 ZNRF3Q9ULT6 936 aa16.49■□□□□ 0.23
SSR4-206ENST00000460616 ZBTB12Q9Y330 459 aaPredicted RBP16.49■□□□□ 0.23
SSR4-206ENST00000460616 PCDHAC2Q9Y5I4 1007 aa16.49■□□□□ 0.23
SSR4-206ENST00000460616 SIGLEC16A6NMB1 481 aa16.48■□□□□ 0.23
SSR4-206ENST00000460616 TULP1O00294 542 aaPredicted RBP16.48■□□□□ 0.23
SSR4-206ENST00000460616 PPP1R11O60927 126 aaPredicted RBP16.48■□□□□ 0.23
SSR4-206ENST00000460616 GSTO1P78417 241 aa16.48■□□□□ 0.23
SSR4-206ENST00000460616 TBC1D25Q3MII6 688 aa16.48■□□□□ 0.23
SSR4-206ENST00000460616 TAF1BQ53T94 588 aaPredicted RBP16.48■□□□□ 0.23
SSR4-206ENST00000460616 SGO2Q562F6 1265 aa16.48■□□□□ 0.23
SSR4-206ENST00000460616 SNX30Q5VWJ9 437 aa16.48■□□□□ 0.23
SSR4-206ENST00000460616 PHLDB3Q6NSJ2 640 aa16.48■□□□□ 0.23
SSR4-206ENST00000460616 RPUSD2Q8IZ73 545 aaKnown RBP16.48■□□□□ 0.23
SSR4-206ENST00000460616 PHC3Q8NDX5 983 aa16.48■□□□□ 0.23
SSR4-206ENST00000460616 BICD1Q96G01 975 aa16.48■□□□□ 0.23
SSR4-206ENST00000460616 ANAPC5Q9UJX4 755 aa16.48■□□□□ 0.23
SSR4-206ENST00000460616 TBCAO75347 108 aaKnown RBP16.48■□□□□ 0.23
SSR4-206ENST00000460616 SPAG7O75391 227 aa16.48■□□□□ 0.23
SSR4-206ENST00000460616 CXCL9Q07325 125 aa16.48■□□□□ 0.23
SSR4-206ENST00000460616 TRIP13Q15645 432 aaPredicted RBP16.48■□□□□ 0.23
SSR4-206ENST00000460616 C4orf50Q6ZRC1 276 aa16.48■□□□□ 0.23
SSR4-206ENST00000460616 ADGRF4Q8IZF3 695 aa16.48■□□□□ 0.23
SSR4-206ENST00000460616 SCG3Q8WXD2 468 aaKnown RBP16.48■□□□□ 0.23
SSR4-206ENST00000460616 JDP2Q8WYK2 163 aa16.48■□□□□ 0.23
SSR4-206ENST00000460616 PWWP2AQ96N64 755 aa16.48■□□□□ 0.23
SSR4-206ENST00000460616 RUSC1Q9BVN2 902 aa16.48■□□□□ 0.23
SSR4-206ENST00000460616 TLE6Q9H808 572 aa16.48■□□□□ 0.23
SSR4-206ENST00000460616 MROH7Q68CQ1 1323 aa16.48■□□□□ 0.23
SSR4-206ENST00000460616 MYO3BQ8WXR4 1341 aa16.48■□□□□ 0.23
SSR4-206ENST00000460616 A0A1B0GVG6 124 aa16.47■□□□□ 0.23
SSR4-206ENST00000460616 SFI1A8K8P3 1242 aa16.47■□□□□ 0.23
SSR4-206ENST00000460616 CLDN3O15551 220 aa16.47■□□□□ 0.23
SSR4-206ENST00000460616 ATP9AO75110 1047 aa16.47■□□□□ 0.23
SSR4-206ENST00000460616 IVDP26440 423 aa16.47■□□□□ 0.23
SSR4-206ENST00000460616 CAV1Q03135 178 aa16.47■□□□□ 0.23
SSR4-206ENST00000460616 STAT4Q14765 748 aa16.47■□□□□ 0.23
SSR4-206ENST00000460616 RBM26Q5T8P6 1007 aaKnown RBP16.47■□□□□ 0.23
SSR4-206ENST00000460616 ARHGAP22Q7Z5H3 698 aa16.47■□□□□ 0.23
SSR4-206ENST00000460616 CPNE8Q86YQ8 564 aa16.47■□□□□ 0.23
SSR4-206ENST00000460616 SLFN12Q8IYM2 578 aa16.47■□□□□ 0.23
SSR4-206ENST00000460616 ERMNQ8TAM6 284 aa16.47■□□□□ 0.23
SSR4-206ENST00000460616 EDF1O60869 148 aaKnown RBP16.47■□□□□ 0.23
SSR4-206ENST00000460616 TRIM49P0CI25 452 aa16.47■□□□□ 0.23
SSR4-206ENST00000460616 TRIM49CP0CI26 452 aa16.47■□□□□ 0.23
SSR4-206ENST00000460616 ADCY8P40145 1251 aa16.47■□□□□ 0.23
SSR4-206ENST00000460616 NOVP48745 357 aa16.47■□□□□ 0.23
SSR4-206ENST00000460616 CACNA2D1P54289 1103 aa16.47■□□□□ 0.23
SSR4-206ENST00000460616 SPARCL1Q14515 664 aa16.47■□□□□ 0.23
SSR4-206ENST00000460616 TMED2Q15363 201 aa16.47■□□□□ 0.23
SSR4-206ENST00000460616 GPR162Q16538 588 aa16.47■□□□□ 0.23
SSR4-206ENST00000460616 FOXB2Q5VYV0 432 aa16.47■□□□□ 0.23
SSR4-206ENST00000460616 ZNF746Q6NUN9 644 aaPredicted RBP16.47■□□□□ 0.23
SSR4-206ENST00000460616 LRRC47Q8N1G4 583 aaKnown RBP16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms