RNA–Protein interactions for RNA: ENST00000459997.1

SRM-202, Transcript of spermidine synthase, humanhuman

TSL 5

Gene SRM, Length 731 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRM-202ENST00000459997 FOXD4L1Q9NU39 408 aa22.86■■□□□ 1.25
SRM-202ENST00000459997 SLC38A7Q9NVC3 462 aa22.86■■□□□ 1.25
SRM-202ENST00000459997 VWA8A3KMH1 1905 aa22.86■■□□□ 1.25
SRM-202ENST00000459997 MTCL1Q9Y4B5 1905 aaKnown RBP22.86■■□□□ 1.25
SRM-202ENST00000459997 FAM13AO94988 1023 aa22.85■■□□□ 1.25
SRM-202ENST00000459997 KRT18P05783 430 aaKnown RBP22.85■■□□□ 1.25
SRM-202ENST00000459997 MATR3P43243 847 aaKnown RBP eCLIP22.85■■□□□ 1.25
SRM-202ENST00000459997 PTPAQ15257 358 aa22.85■■□□□ 1.25
SRM-202ENST00000459997 HAUS6Q7Z4H7 955 aa22.85■■□□□ 1.25
SRM-202ENST00000459997 UBALD2Q8IYN6 164 aa22.85■■□□□ 1.25
SRM-202ENST00000459997 C3orf58Q8NDZ4 430 aa22.85■■□□□ 1.25
SRM-202ENST00000459997 ZNF707Q96C28 371 aaPredicted RBP22.85■■□□□ 1.25
SRM-202ENST00000459997 ZMAT2Q96NC0 199 aaKnown RBP22.85■■□□□ 1.25
SRM-202ENST00000459997 RHOBTB2Q9BYZ6 727 aa22.85■■□□□ 1.25
SRM-202ENST00000459997 PIDD1Q9HB75 910 aa22.85■■□□□ 1.25
SRM-202ENST00000459997 ZDHHC7Q9NXF8 308 aa22.85■■□□□ 1.25
SRM-202ENST00000459997 CNTN3Q9P232 1028 aa22.85■■□□□ 1.25
SRM-202ENST00000459997 CLUHO75153 1309 aa22.84■■□□□ 1.25
SRM-202ENST00000459997 K7ELQ4 463 aaPredicted RBP22.84■■□□□ 1.25
SRM-202ENST00000459997 CLDN3O15551 220 aa22.84■■□□□ 1.25
SRM-202ENST00000459997 KCNE1P15382 129 aa22.84■■□□□ 1.25
SRM-202ENST00000459997 FGFR3P22607 806 aa22.84■■□□□ 1.25
SRM-202ENST00000459997 MARCKSP29966 332 aaPredicted RBP22.84■■□□□ 1.25
SRM-202ENST00000459997 SEZ6Q53EL9 994 aa22.84■■□□□ 1.25
SRM-202ENST00000459997 SPECC1Q5M775 1068 aa22.84■■□□□ 1.25
SRM-202ENST00000459997 FAM173BQ6P4H8 233 aa22.84■■□□□ 1.25
SRM-202ENST00000459997 CD300LGQ6UXG3 332 aa22.84■■□□□ 1.25
SRM-202ENST00000459997 SUGP1Q8IWZ8 645 aaKnown RBP22.84■■□□□ 1.25
SRM-202ENST00000459997 MYCT1Q8N699 235 aa22.84■■□□□ 1.25
SRM-202ENST00000459997 DDX27Q96GQ7 796 aaKnown RBP22.84■■□□□ 1.25
SRM-202ENST00000459997 CCSER1Q9C0I3 900 aa22.84■■□□□ 1.25
SRM-202ENST00000459997 WDR6Q9NNW5 1121 aaKnown RBP22.84■■□□□ 1.25
SRM-202ENST00000459997 CITO14578 2027 aa22.84■■□□□ 1.25
SRM-202ENST00000459997 I3L4J1 428 aa22.83■■□□□ 1.25
SRM-202ENST00000459997 K7ENM7 598 aa22.83■■□□□ 1.25
SRM-202ENST00000459997 MEFVO15553 781 aaPredicted RBP22.83■■□□□ 1.25
SRM-202ENST00000459997 ADAM12O43184 909 aa22.83■■□□□ 1.25
SRM-202ENST00000459997 TRAPPC3O43617 180 aa22.83■■□□□ 1.25
SRM-202ENST00000459997 ZNF131P52739 623 aa22.83■■□□□ 1.25
SRM-202ENST00000459997 MCL1Q07820 350 aa22.83■■□□□ 1.25
SRM-202ENST00000459997 FBXL6Q8N531 539 aa22.83■■□□□ 1.25
SRM-202ENST00000459997 LARP4BQ92615 738 aaKnown RBP22.83■■□□□ 1.25
SRM-202ENST00000459997 STAMQ92783 540 aa22.83■■□□□ 1.25
SRM-202ENST00000459997 C18orf25Q96B23 403 aaPredicted RBP22.83■■□□□ 1.25
SRM-202ENST00000459997 EPSTI1Q96J88 318 aa22.83■■□□□ 1.25
SRM-202ENST00000459997 SMOC2Q9H3U7 446 aa22.83■■□□□ 1.25
SRM-202ENST00000459997 ZHX3Q9H4I2 956 aa22.83■■□□□ 1.25
SRM-202ENST00000459997 PARVGQ9HBI0 331 aa22.83■■□□□ 1.25
SRM-202ENST00000459997 FBXO2Q9UK22 296 aaPredicted RBP22.83■■□□□ 1.25
SRM-202ENST00000459997 FBXW11Q9UKB1 542 aa22.83■■□□□ 1.25
SRM-202ENST00000459997 PODXLO00592 558 aa22.82■■□□□ 1.24
SRM-202ENST00000459997 TBCAO75347 108 aaKnown RBP22.82■■□□□ 1.24
SRM-202ENST00000459997 ZMYND10O75800 440 aa22.82■■□□□ 1.24
SRM-202ENST00000459997 PAPLNO95428 1278 aa22.82■■□□□ 1.24
SRM-202ENST00000459997 TKTP29401 623 aaKnown RBP22.82■■□□□ 1.24
SRM-202ENST00000459997 BRCC3P46736 316 aa22.82■■□□□ 1.24
SRM-202ENST00000459997 CEBPZQ03701 1054 aaKnown RBP22.82■■□□□ 1.24
SRM-202ENST00000459997 SLC10A6Q3KNW5 377 aa22.82■■□□□ 1.24
SRM-202ENST00000459997 LIN9Q5TKA1 542 aa22.82■■□□□ 1.24
SRM-202ENST00000459997 USP49Q70CQ1 688 aa22.82■■□□□ 1.24
SRM-202ENST00000459997 PRKD2Q9BZL6 878 aa22.82■■□□□ 1.24
SRM-202ENST00000459997 KCNH6Q9H252 994 aa22.82■■□□□ 1.24
SRM-202ENST00000459997 TBX20Q9UMR3 447 aa22.82■■□□□ 1.24
SRM-202ENST00000459997 PDCD11Q14690 1871 aaKnown RBP22.81■■□□□ 1.24
SRM-202ENST00000459997 HNRNPDLO14979 420 aaKnown RBP22.81■■□□□ 1.24
SRM-202ENST00000459997 N4BP1O75113 896 aaKnown RBP22.81■■□□□ 1.24
SRM-202ENST00000459997 SCP2P22307 547 aa22.81■■□□□ 1.24
SRM-202ENST00000459997 GBP2P32456 591 aaPredicted RBP22.81■■□□□ 1.24
SRM-202ENST00000459997 OR1D2P34982 312 aa22.81■■□□□ 1.24
SRM-202ENST00000459997 LIG4P49917 911 aa22.81■■□□□ 1.24
SRM-202ENST00000459997 KCNN1Q92952 543 aa22.81■■□□□ 1.24
SRM-202ENST00000459997 HAPLN2Q9GZV7 340 aa22.81■■□□□ 1.24
SRM-202ENST00000459997 MTRRQ9UBK8 725 aa22.81■■□□□ 1.24
SRM-202ENST00000459997 MTMR6Q9Y217 621 aa22.81■■□□□ 1.24
SRM-202ENST00000459997 SRPRBQ9Y5M8 271 aaKnown RBP22.81■■□□□ 1.24
SRM-202ENST00000459997 ZNF318Q5VUA4 2279 aa22.8■■□□□ 1.24
SRM-202ENST00000459997 MYO10Q9HD67 2058 aa22.8■■□□□ 1.24
SRM-202ENST00000459997 TRAK2O60296 914 aa22.8■■□□□ 1.24
SRM-202ENST00000459997 CXCL8P10145 99 aa22.8■■□□□ 1.24
SRM-202ENST00000459997 RPL9P32969 192 aaKnown RBP22.8■■□□□ 1.24
SRM-202ENST00000459997 DDIT3P35638 169 aa22.8■■□□□ 1.24
SRM-202ENST00000459997 RAB33AQ14088 237 aa22.8■■□□□ 1.24
SRM-202ENST00000459997 ANKS3Q6ZW76 656 aa22.8■■□□□ 1.24
SRM-202ENST00000459997 CLIC6Q96NY7 704 aa22.8■■□□□ 1.24
SRM-202ENST00000459997 CCDC39Q9UFE4 941 aa22.8■■□□□ 1.24
SRM-202ENST00000459997 CDY1Q9Y6F8 540 aa22.8■■□□□ 1.24
SRM-202ENST00000459997 KMT2EQ8IZD2 1858 aa22.79■■□□□ 1.24
SRM-202ENST00000459997 PDGFBP01127 241 aaPredicted RBP22.79■■□□□ 1.24
SRM-202ENST00000459997 C8AP07357 584 aa22.79■■□□□ 1.24
SRM-202ENST00000459997 CLTAP09496 248 aa22.79■■□□□ 1.24
SRM-202ENST00000459997 TXLNAP40222 546 aa22.79■■□□□ 1.24
SRM-202ENST00000459997 PPM1LQ5SGD2 360 aa22.79■■□□□ 1.24
SRM-202ENST00000459997 KCNK12Q9HB15 430 aa22.79■■□□□ 1.24
SRM-202ENST00000459997 STK17AQ9UEE5 414 aa22.79■■□□□ 1.24
SRM-202ENST00000459997 TUBGCP4Q9UGJ1 667 aa22.79■■□□□ 1.24
SRM-202ENST00000459997 NUB1Q9Y5A7 615 aa22.79■■□□□ 1.24
SRM-202ENST00000459997 BACE2Q9Y5Z0 518 aa22.79■■□□□ 1.24
SRM-202ENST00000459997 MUC6Q6W4X9 2439 aa22.79■■□□□ 1.24
SRM-202ENST00000459997 WDFY4Q6ZS81 3184 aa22.79■■□□□ 1.24
SRM-202ENST00000459997 STX6O43752 255 aa22.78■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms