RNA–Protein interactions for RNA: ENST00000454350.5

UBE2D4-208, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

TSL 2

Gene UBE2D4, Length 789 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-208ENST00000454350 RAB33AQ14088 237 aa20.3■□□□□ 0.84
UBE2D4-208ENST00000454350 CWF19L1Q69YN2 538 aaKnown RBP20.3■□□□□ 0.84
UBE2D4-208ENST00000454350 MPZL3Q6UWV2 235 aa20.3■□□□□ 0.84
UBE2D4-208ENST00000454350 STAMQ92783 540 aa20.3■□□□□ 0.84
UBE2D4-208ENST00000454350 SNX27Q96L92 541 aa20.3■□□□□ 0.84
UBE2D4-208ENST00000454350 UROC1Q96N76 676 aa20.3■□□□□ 0.84
UBE2D4-208ENST00000454350 CCDC94Q9BW85 323 aaPredicted RBP20.3■□□□□ 0.84
UBE2D4-208ENST00000454350 MTRRQ9UBK8 725 aa20.3■□□□□ 0.84
UBE2D4-208ENST00000454350 NPHP3-ACAD11A0A0J9YXS1 232 aa20.29■□□□□ 0.84
UBE2D4-208ENST00000454350 H3BQV1 296 aa20.29■□□□□ 0.84
UBE2D4-208ENST00000454350 I3L4J1 428 aa20.29■□□□□ 0.84
UBE2D4-208ENST00000454350 MAPTP10636 758 aaKnown RBP20.29■□□□□ 0.84
UBE2D4-208ENST00000454350 PLS3P13797 630 aa20.29■□□□□ 0.84
UBE2D4-208ENST00000454350 KCNE1P15382 129 aa20.29■□□□□ 0.84
UBE2D4-208ENST00000454350 GBP2P32456 591 aaPredicted RBP20.29■□□□□ 0.84
UBE2D4-208ENST00000454350 BRCC3P46736 316 aa20.29■□□□□ 0.84
UBE2D4-208ENST00000454350 MCM2P49736 904 aa20.29■□□□□ 0.84
UBE2D4-208ENST00000454350 NUBP1P53384 320 aa20.29■□□□□ 0.84
UBE2D4-208ENST00000454350 ZRSR1Q15695 479 aaKnown RBP20.29■□□□□ 0.84
UBE2D4-208ENST00000454350 ASTLQ6HA08 431 aaPredicted RBP20.29■□□□□ 0.84
UBE2D4-208ENST00000454350 APBB1IPQ7Z5R6 666 aaPredicted RBP20.29■□□□□ 0.84
UBE2D4-208ENST00000454350 KCNN1Q92952 543 aa20.29■□□□□ 0.84
UBE2D4-208ENST00000454350 DDX27Q96GQ7 796 aaKnown RBP20.29■□□□□ 0.84
UBE2D4-208ENST00000454350 HAPLN2Q9GZV7 340 aa20.29■□□□□ 0.84
UBE2D4-208ENST00000454350 CNTN3Q9P232 1028 aa20.29■□□□□ 0.84
UBE2D4-208ENST00000454350 DMDP11532 3685 aa20.29■□□□□ 0.84
UBE2D4-208ENST00000454350 VPS13AQ96RL7 3174 aa20.28■□□□□ 0.84
UBE2D4-208ENST00000454350 ZFHX2Q9C0A1 2572 aaPredicted RBP20.28■□□□□ 0.84
UBE2D4-208ENST00000454350 ANHXE9PGG2 379 aa20.28■□□□□ 0.84
UBE2D4-208ENST00000454350 GALR2O43603 387 aaPredicted RBP20.28■□□□□ 0.84
UBE2D4-208ENST00000454350 C8AP07357 584 aa20.28■□□□□ 0.84
UBE2D4-208ENST00000454350 PLA2G4BP0C869 781 aa20.28■□□□□ 0.84
UBE2D4-208ENST00000454350 LAMP2P13473 410 aa20.28■□□□□ 0.84
UBE2D4-208ENST00000454350 TKTP29401 623 aaKnown RBP20.28■□□□□ 0.84
UBE2D4-208ENST00000454350 OR1D2P34982 312 aa20.28■□□□□ 0.84
UBE2D4-208ENST00000454350 CLCN5P51795 746 aa20.28■□□□□ 0.84
UBE2D4-208ENST00000454350 GRIN1Q05586 938 aa20.28■□□□□ 0.84
UBE2D4-208ENST00000454350 PDXDC1Q6P996 788 aa20.28■□□□□ 0.84
UBE2D4-208ENST00000454350 SLC44A3Q8N4M1 653 aa20.28■□□□□ 0.84
UBE2D4-208ENST00000454350 PIDD1Q9HB75 910 aa20.28■□□□□ 0.84
UBE2D4-208ENST00000454350 TOPORSQ9NS56 1045 aaPredicted RBP20.28■□□□□ 0.84
UBE2D4-208ENST00000454350 SMC3Q9UQE7 1217 aa20.28■□□□□ 0.84
UBE2D4-208ENST00000454350 HNRNPA1P09651 372 aaKnown RBP eCLIP20.27■□□□□ 0.84
UBE2D4-208ENST00000454350 HOXA9P31269 272 aa20.27■□□□□ 0.84
UBE2D4-208ENST00000454350 NTHL1P78549 312 aa20.27■□□□□ 0.84
UBE2D4-208ENST00000454350 SLC10A6Q3KNW5 377 aa20.27■□□□□ 0.84
UBE2D4-208ENST00000454350 GRASPQ7Z6J2 395 aaPredicted RBP20.27■□□□□ 0.84
UBE2D4-208ENST00000454350 C18orf25Q96B23 403 aaPredicted RBP20.27■□□□□ 0.84
UBE2D4-208ENST00000454350 ACAP3Q96P50 834 aa20.27■□□□□ 0.84
UBE2D4-208ENST00000454350 BLOC1S4Q9NUP1 217 aa20.27■□□□□ 0.84
UBE2D4-208ENST00000454350 FAM86C1Q9NVL1 165 aa20.27■□□□□ 0.84
UBE2D4-208ENST00000454350 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP20.27■□□□□ 0.84
UBE2D4-208ENST00000454350 KCND2Q9NZV8 630 aa20.27■□□□□ 0.84
UBE2D4-208ENST00000454350 BACE2Q9Y5Z0 518 aa20.27■□□□□ 0.84
UBE2D4-208ENST00000454350 RIF1Q5UIP0 2472 aaKnown RBP20.27■□□□□ 0.83
UBE2D4-208ENST00000454350 PI15O43692 258 aa20.26■□□□□ 0.83
UBE2D4-208ENST00000454350 TBC1D4O60343 1298 aa20.26■□□□□ 0.83
UBE2D4-208ENST00000454350 TOM1L1O75674 476 aa20.26■□□□□ 0.83
UBE2D4-208ENST00000454350 POU2F2P09086 479 aa20.26■□□□□ 0.83
UBE2D4-208ENST00000454350 YARSP54577 528 aaKnown RBP20.26■□□□□ 0.83
UBE2D4-208ENST00000454350 NCKAP1LP55160 1127 aa20.26■□□□□ 0.83
UBE2D4-208ENST00000454350 CACNB1Q02641 598 aaPredicted RBP20.26■□□□□ 0.83
UBE2D4-208ENST00000454350 HTR4Q13639 388 aa20.26■□□□□ 0.83
UBE2D4-208ENST00000454350 SEZ6Q53EL9 994 aa20.26■□□□□ 0.83
UBE2D4-208ENST00000454350 AXDND1Q5T1B0 1012 aaPredicted RBP20.26■□□□□ 0.83
UBE2D4-208ENST00000454350 LARP1BQ659C4 914 aaKnown RBP20.26■□□□□ 0.83
UBE2D4-208ENST00000454350 ZPBP2Q6X784 338 aa20.26■□□□□ 0.83
UBE2D4-208ENST00000454350 GET4Q7L5D6 327 aaPredicted RBP20.26■□□□□ 0.83
UBE2D4-208ENST00000454350 TMEM130Q8N3G9 435 aa20.26■□□□□ 0.83
UBE2D4-208ENST00000454350 NXPE3Q969Y0 559 aa20.26■□□□□ 0.83
UBE2D4-208ENST00000454350 AK8Q96MA6 479 aa20.26■□□□□ 0.83
UBE2D4-208ENST00000454350 CDY1Q9Y6F8 540 aa20.26■□□□□ 0.83
UBE2D4-208ENST00000454350 KRBA1A5PL33 1030 aa20.25■□□□□ 0.83
UBE2D4-208ENST00000454350 H0Y858 1186 aa20.25■□□□□ 0.83
UBE2D4-208ENST00000454350 PODXLO00592 558 aa20.25■□□□□ 0.83
UBE2D4-208ENST00000454350 CCL16O15467 120 aa20.25■□□□□ 0.83
UBE2D4-208ENST00000454350 SLC26A4O43511 780 aa20.25■□□□□ 0.83
UBE2D4-208ENST00000454350 FSHRP23945 695 aa20.25■□□□□ 0.83
UBE2D4-208ENST00000454350 MCL1Q07820 350 aa20.25■□□□□ 0.83
UBE2D4-208ENST00000454350 CUL4AQ13619 759 aa20.25■□□□□ 0.83
UBE2D4-208ENST00000454350 MRPL58Q14197 206 aaKnown RBP20.25■□□□□ 0.83
UBE2D4-208ENST00000454350 PPM1LQ5SGD2 360 aa20.25■□□□□ 0.83
UBE2D4-208ENST00000454350 SLC8B1Q6J4K2 584 aa20.25■□□□□ 0.83
UBE2D4-208ENST00000454350 ANKS3Q6ZW76 656 aa20.25■□□□□ 0.83
UBE2D4-208ENST00000454350 SLC7A14Q8TBB6 771 aa20.25■□□□□ 0.83
UBE2D4-208ENST00000454350 TCHPQ9BT92 498 aa20.25■□□□□ 0.83
UBE2D4-208ENST00000454350 UPF2Q9HAU5 1272 aaKnown RBP20.25■□□□□ 0.83
UBE2D4-208ENST00000454350 SLC38A7Q9NVC3 462 aa20.25■□□□□ 0.83
UBE2D4-208ENST00000454350 ZSCAN21Q9Y5A6 473 aaPredicted RBP20.25■□□□□ 0.83
UBE2D4-208ENST00000454350 AOC1P19801 751 aa20.24■□□□□ 0.83
UBE2D4-208ENST00000454350 NOLC1Q14978 699 aaKnown RBP eCLIP20.24■□□□□ 0.83
UBE2D4-208ENST00000454350 UVSSAQ2YD98 709 aa20.24■□□□□ 0.83
UBE2D4-208ENST00000454350 LIN9Q5TKA1 542 aa20.24■□□□□ 0.83
UBE2D4-208ENST00000454350 SIX5Q8N196 739 aa20.24■□□□□ 0.83
UBE2D4-208ENST00000454350 ST13P5Q8NFI4 369 aaPredicted RBP20.24■□□□□ 0.83
UBE2D4-208ENST00000454350 REEP2Q9BRK0 252 aa20.24■□□□□ 0.83
UBE2D4-208ENST00000454350 RPP25Q9BUL9 199 aaKnown RBP20.24■□□□□ 0.83
UBE2D4-208ENST00000454350 HCFC1R1Q9NWW0 138 aa20.24■□□□□ 0.83
UBE2D4-208ENST00000454350 ANKFY1Q9P2R3 1169 aa20.24■□□□□ 0.83
UBE2D4-208ENST00000454350 WNT16Q9UBV4 365 aa20.24■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms