RNA–Protein interactions for RNA: ENST00000451859.5

RFX3-209, Transcript of regulatory factor X3, humanhuman

TSL 3

Gene RFX3, Length 740 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-209ENST00000451859 RNF40O75150 1001 aa9.52□□□□□ -0.89
RFX3-209ENST00000451859 GLUD1P00367 558 aa9.52□□□□□ -0.89
RFX3-209ENST00000451859 ASGR2P07307 311 aa9.52□□□□□ -0.89
RFX3-209ENST00000451859 PLA2G4BP0C869 781 aa9.52□□□□□ -0.89
RFX3-209ENST00000451859 GGCXP38435 758 aa9.52□□□□□ -0.89
RFX3-209ENST00000451859 UBA7P41226 1012 aa9.52□□□□□ -0.89
RFX3-209ENST00000451859 MATR3P43243 847 aaKnown RBP eCLIP9.52□□□□□ -0.892e-9■■■□□ 18.9
RFX3-209ENST00000451859 COPS2P61201 443 aa9.52□□□□□ -0.89
RFX3-209ENST00000451859 DSG1Q02413 1049 aa9.52□□□□□ -0.89
RFX3-209ENST00000451859 CEBPZQ03701 1054 aaKnown RBP9.52□□□□□ -0.89
RFX3-209ENST00000451859 GRIN1Q05586 938 aa9.52□□□□□ -0.89
RFX3-209ENST00000451859 STRN3Q13033 797 aa9.52□□□□□ -0.89
RFX3-209ENST00000451859 SF3A1Q15459 793 aaKnown RBP9.52□□□□□ -0.89
RFX3-209ENST00000451859 USP41Q3LFD5 358 aa9.52□□□□□ -0.89
RFX3-209ENST00000451859 TMEM119Q4V9L6 283 aa9.52□□□□□ -0.89
RFX3-209ENST00000451859 SEZ6Q53EL9 994 aa9.52□□□□□ -0.89
RFX3-209ENST00000451859 RTP2Q5QGT7 225 aa9.52□□□□□ -0.89
RFX3-209ENST00000451859 FAM171A1Q5VUB5 890 aa9.52□□□□□ -0.89
RFX3-209ENST00000451859 KIAA0319Q5VV43 1072 aa9.52□□□□□ -0.89
RFX3-209ENST00000451859 NUDT18Q6ZVK8 323 aa9.52□□□□□ -0.89
RFX3-209ENST00000451859 C1orf186Q6ZWK4 172 aa9.52□□□□□ -0.89
RFX3-209ENST00000451859 TAS1R3Q7RTX0 852 aa9.52□□□□□ -0.89
RFX3-209ENST00000451859 APBB1IPQ7Z5R6 666 aaPredicted RBP9.52□□□□□ -0.89
RFX3-209ENST00000451859 RNF168Q8IYW5 571 aaPredicted RBP9.52□□□□□ -0.89
RFX3-209ENST00000451859 TDRD5Q8NAT2 981 aaKnown RBP9.52□□□□□ -0.89
RFX3-209ENST00000451859 EDAQ92838 391 aa9.52□□□□□ -0.89
RFX3-209ENST00000451859 CALML4Q96GE6 196 aa9.52□□□□□ -0.89
RFX3-209ENST00000451859 NECTIN4Q96NY8 510 aa9.52□□□□□ -0.89
RFX3-209ENST00000451859 ACO2Q99798 780 aaKnown RBP9.52□□□□□ -0.89
RFX3-209ENST00000451859 CCDC94Q9BW85 323 aaPredicted RBP9.52□□□□□ -0.89
RFX3-209ENST00000451859 MRPL4Q9BYD3 311 aaKnown RBP9.52□□□□□ -0.89
RFX3-209ENST00000451859 NT5C3AQ9H0P0 336 aa9.52□□□□□ -0.89
RFX3-209ENST00000451859 CDT1Q9H211 546 aa9.52□□□□□ -0.89
RFX3-209ENST00000451859 SMOC2Q9H3U7 446 aa9.52□□□□□ -0.89
RFX3-209ENST00000451859 ZHX3Q9H4I2 956 aa9.52□□□□□ -0.89
RFX3-209ENST00000451859 GOLGA2P5Q9HBQ8 144 aa9.52□□□□□ -0.89
RFX3-209ENST00000451859 STK39Q9UEW8 545 aa9.52□□□□□ -0.89
RFX3-209ENST00000451859 SSX2IPQ9Y2D8 614 aa9.52□□□□□ -0.89
RFX3-209ENST00000451859 SF3B1O75533 1304 aaKnown RBP eCLIP9.52□□□□□ -0.893e-9■■■■■ 93.6
RFX3-209ENST00000451859 SCN1AP35498 2009 aa9.51□□□□□ -0.89
RFX3-209ENST00000451859 NOTCH4Q99466 2003 aa9.51□□□□□ -0.89
RFX3-209ENST00000451859 TMEM221A6NGB7 291 aa9.51□□□□□ -0.89
RFX3-209ENST00000451859 I3L4J1 428 aa9.51□□□□□ -0.89
RFX3-209ENST00000451859 M0R296 226 aa9.51□□□□□ -0.89
RFX3-209ENST00000451859 RFPL2O75678 378 aa9.51□□□□□ -0.89
RFX3-209ENST00000451859 KRT18P05783 430 aaKnown RBP9.51□□□□□ -0.89
RFX3-209ENST00000451859 IGFBP6P24592 240 aaPredicted RBP9.51□□□□□ -0.89
RFX3-209ENST00000451859 CLCNKBP51801 687 aa9.51□□□□□ -0.89
RFX3-209ENST00000451859 YARSP54577 528 aaKnown RBP9.51□□□□□ -0.89
RFX3-209ENST00000451859 SLC12A3P55017 1021 aa9.51□□□□□ -0.89
RFX3-209ENST00000451859 ZXDAP98168 799 aa9.51□□□□□ -0.89
RFX3-209ENST00000451859 CUL4AQ13619 759 aa9.51□□□□□ -0.89
RFX3-209ENST00000451859 KARSQ15046 597 aaKnown RBP9.51□□□□□ -0.89
RFX3-209ENST00000451859 PTPN21Q16825 1174 aa9.51□□□□□ -0.89
RFX3-209ENST00000451859 SPECC1Q5M775 1068 aa9.51□□□□□ -0.89
RFX3-209ENST00000451859 HYIQ5T013 277 aa9.51□□□□□ -0.89
RFX3-209ENST00000451859 LCE2AQ5TA79 106 aaPredicted RBP9.51□□□□□ -0.89
RFX3-209ENST00000451859 ARL6IP4Q66PJ3 421 aaKnown RBP9.51□□□□□ -0.89
RFX3-209ENST00000451859 FAM173BQ6P4H8 233 aa9.51□□□□□ -0.89
RFX3-209ENST00000451859 BRAPQ7Z569 592 aa9.51□□□□□ -0.89
RFX3-209ENST00000451859 GPBP1Q86WP2 473 aa9.51□□□□□ -0.89
RFX3-209ENST00000451859 SYT2Q8N9I0 419 aaPredicted RBP9.51□□□□□ -0.89
RFX3-209ENST00000451859 KREMEN2Q8NCW0 462 aa9.51□□□□□ -0.89
RFX3-209ENST00000451859 LRRC15Q8TF66 581 aa9.51□□□□□ -0.89
RFX3-209ENST00000451859 FAM122AQ96E09 287 aa9.51□□□□□ -0.89
RFX3-209ENST00000451859 BICD1Q96G01 975 aa9.51□□□□□ -0.89
RFX3-209ENST00000451859 ZBTB45Q96K62 511 aaPredicted RBP9.51□□□□□ -0.89
RFX3-209ENST00000451859 BACH2Q9BYV9 841 aa9.51□□□□□ -0.89
RFX3-209ENST00000451859 ARHGAP28Q9P2N2 729 aa9.51□□□□□ -0.89
RFX3-209ENST00000451859 TNFSF13BQ9Y275 285 aa9.51□□□□□ -0.89
RFX3-209ENST00000451859 CLIC4Q9Y696 253 aa9.51□□□□□ -0.89
RFX3-209ENST00000451859 MIA3Q5JRA6 1907 aa9.5□□□□□ -0.89
RFX3-209ENST00000451859 TSC2P49815 1807 aa9.5□□□□□ -0.89
RFX3-209ENST00000451859 CCDC195A0A1B0GUA6 201 aa9.5□□□□□ -0.89
RFX3-209ENST00000451859 TGM5O43548 720 aa9.5□□□□□ -0.89
RFX3-209ENST00000451859 EFEMP2O95967 443 aa9.5□□□□□ -0.89
RFX3-209ENST00000451859 PLS3P13797 630 aa9.5□□□□□ -0.89
RFX3-209ENST00000451859 PLCG1P19174 1290 aa9.5□□□□□ -0.89
RFX3-209ENST00000451859 PDCP20941 246 aa9.5□□□□□ -0.89
RFX3-209ENST00000451859 GUCY2CP25092 1073 aa9.5□□□□□ -0.89
RFX3-209ENST00000451859 MARCKSP29966 332 aaPredicted RBP9.5□□□□□ -0.89
RFX3-209ENST00000451859 PLA2G5P39877 138 aa9.5□□□□□ -0.89
RFX3-209ENST00000451859 GRM5P41594 1212 aa9.5□□□□□ -0.89
RFX3-209ENST00000451859 SMTNP53814 917 aa9.5□□□□□ -0.89
RFX3-209ENST00000451859 MCM6Q14566 821 aa9.5□□□□□ -0.89
RFX3-209ENST00000451859 NAB2Q15742 525 aa9.5□□□□□ -0.89
RFX3-209ENST00000451859 PSMD5Q16401 504 aa9.5□□□□□ -0.89
RFX3-209ENST00000451859 ELMSAN1Q6PJG2 1045 aa9.5□□□□□ -0.89
RFX3-209ENST00000451859 MPZL3Q6UWV2 235 aa9.5□□□□□ -0.89
RFX3-209ENST00000451859 CCDC149Q6ZUS6 474 aa9.5□□□□□ -0.89
RFX3-209ENST00000451859 GPR149Q86SP6 731 aa9.5□□□□□ -0.89
RFX3-209ENST00000451859 SMG7Q92540 1137 aaKnown RBP9.5□□□□□ -0.89
RFX3-209ENST00000451859 PBXIP1Q96AQ6 731 aa9.5□□□□□ -0.89
RFX3-209ENST00000451859 AK8Q96MA6 479 aa9.5□□□□□ -0.89
RFX3-209ENST00000451859 REEP2Q9BRK0 252 aa9.5□□□□□ -0.89
RFX3-209ENST00000451859 TTPALQ9BTX7 342 aa9.5□□□□□ -0.89
RFX3-209ENST00000451859 TIPINQ9BVW5 301 aa9.5□□□□□ -0.89
RFX3-209ENST00000451859 TMEM134Q9H6X4 195 aa9.5□□□□□ -0.89
RFX3-209ENST00000451859 PIDD1Q9HB75 910 aa9.5□□□□□ -0.89
RFX3-209ENST00000451859 RXFP1Q9HBX9 757 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms