RNA–Protein interactions for RNA: ENST00000449421.6

NUP85-202, Transcript of nucleoporin 85, humanhuman

TSL 2

Gene NUP85, Length 1,287 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP85-202ENST00000449421 PPFIA1Q13136 1202 aa13.53□□□□□ -0.24
NUP85-202ENST00000449421 DRP2Q13474 957 aa13.53□□□□□ -0.24
NUP85-202ENST00000449421 DUOXA2Q1HG44 320 aa13.53□□□□□ -0.24
NUP85-202ENST00000449421 LHX8Q68G74 356 aa13.53□□□□□ -0.24
NUP85-202ENST00000449421 MTHFD1LQ6UB35 978 aa13.53□□□□□ -0.24
NUP85-202ENST00000449421 CRELD2Q6UXH1 353 aaPredicted RBP13.53□□□□□ -0.24
NUP85-202ENST00000449421 RSRC2Q7L4I2 434 aaKnown RBP13.53□□□□□ -0.24
NUP85-202ENST00000449421 ZNF410Q86VK4 478 aa13.53□□□□□ -0.24
NUP85-202ENST00000449421 ZNF677Q86XU0 584 aa13.53□□□□□ -0.24
NUP85-202ENST00000449421 RHOT2Q8IXI1 618 aa13.53□□□□□ -0.24
NUP85-202ENST00000449421 CAGE1Q8TC20 777 aa13.53□□□□□ -0.24
NUP85-202ENST00000449421 HELQQ8TDG4 1101 aa13.53□□□□□ -0.24
NUP85-202ENST00000449421 TAS1R2Q8TE23 839 aa13.53□□□□□ -0.24
NUP85-202ENST00000449421 TAF4BQ92750 862 aa13.53□□□□□ -0.24
NUP85-202ENST00000449421 ZBTB45Q96K62 511 aaPredicted RBP13.53□□□□□ -0.24
NUP85-202ENST00000449421 NLRP4Q96MN2 994 aa13.53□□□□□ -0.24
NUP85-202ENST00000449421 POP1Q99575 1024 aaKnown RBP13.53□□□□□ -0.24
NUP85-202ENST00000449421 MCOLN1Q9GZU1 580 aa13.53□□□□□ -0.24
NUP85-202ENST00000449421 AP5M1Q9H0R1 490 aa13.53□□□□□ -0.24
NUP85-202ENST00000449421 UPF3AQ9H1J1 476 aaKnown RBP13.53□□□□□ -0.24
NUP85-202ENST00000449421 DDX20Q9UHI6 824 aaKnown RBP13.53□□□□□ -0.24
NUP85-202ENST00000449421 TFR2Q9UP52 801 aa13.53□□□□□ -0.24
NUP85-202ENST00000449421 AKT3Q9Y243 479 aa13.53□□□□□ -0.24
NUP85-202ENST00000449421 PCDHGC5Q9Y5F6 944 aa13.53□□□□□ -0.24
NUP85-202ENST00000449421 CES2O00748 559 aa13.52□□□□□ -0.25
NUP85-202ENST00000449421 ENC1O14682 589 aa13.52□□□□□ -0.25
NUP85-202ENST00000449421 DYNC1LI2O43237 492 aaPredicted RBP13.52□□□□□ -0.25
NUP85-202ENST00000449421 KPNA6O60684 536 aa13.52□□□□□ -0.25
NUP85-202ENST00000449421 RTN2O75298 545 aa13.52□□□□□ -0.25
NUP85-202ENST00000449421 HLA-DRAP01903 254 aa13.52□□□□□ -0.25
NUP85-202ENST00000449421 MCF2P10911 925 aa13.52□□□□□ -0.25
NUP85-202ENST00000449421 CCL5P13501 91 aa13.52□□□□□ -0.25
NUP85-202ENST00000449421 PROZP22891 400 aa13.52□□□□□ -0.25
NUP85-202ENST00000449421 PDE6CP51160 858 aa13.52□□□□□ -0.25
NUP85-202ENST00000449421 CLCN3P51790 818 aa13.52□□□□□ -0.25
NUP85-202ENST00000449421 GJA9P57773 515 aa13.52□□□□□ -0.25
NUP85-202ENST00000449421 ITIH3Q06033 890 aa13.52□□□□□ -0.25
NUP85-202ENST00000449421 ELF2Q15723 593 aa13.52□□□□□ -0.25
NUP85-202ENST00000449421 GRIK4Q16099 956 aa13.52□□□□□ -0.25
NUP85-202ENST00000449421 GLYCTKQ8IVS8 523 aa13.52□□□□□ -0.25
NUP85-202ENST00000449421 LINC01465Q8N7H1 131 aa13.52□□□□□ -0.25
NUP85-202ENST00000449421 SEMA4DQ92854 862 aa13.52□□□□□ -0.25
NUP85-202ENST00000449421 FAXDC2Q96IV6 333 aa13.52□□□□□ -0.25
NUP85-202ENST00000449421 SYT11Q9BT88 431 aa13.52□□□□□ -0.25
NUP85-202ENST00000449421 KATNAL1Q9BW62 490 aa13.52□□□□□ -0.25
NUP85-202ENST00000449421 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.52□□□□□ -0.25
NUP85-202ENST00000449421 UNC93B1Q9H1C4 597 aa13.52□□□□□ -0.25
NUP85-202ENST00000449421 PDE11AQ9HCR9 933 aa13.52□□□□□ -0.25
NUP85-202ENST00000449421 SEPT11Q9NVA2 429 aaKnown RBP13.52□□□□□ -0.25
NUP85-202ENST00000449421 CPSF3Q9UKF6 684 aaKnown RBP13.52□□□□□ -0.25
NUP85-202ENST00000449421 CAPN6Q9Y6Q1 641 aa13.52□□□□□ -0.25
NUP85-202ENST00000449421 NRCAMQ92823 1304 aa13.52□□□□□ -0.25
NUP85-202ENST00000449421 SIP14410 1827 aa13.51□□□□□ -0.25
NUP85-202ENST00000449421 CNTNAP2Q9UHC6 1331 aa13.51□□□□□ -0.25
NUP85-202ENST00000449421 BUB1O43683 1085 aa13.51□□□□□ -0.25
NUP85-202ENST00000449421 LRRN2O75325 713 aa13.51□□□□□ -0.25
NUP85-202ENST00000449421 PALMO75781 387 aa13.51□□□□□ -0.25
NUP85-202ENST00000449421 TNNC2P02585 160 aa13.51□□□□□ -0.25
NUP85-202ENST00000449421 CAPN2P17655 700 aa13.51□□□□□ -0.25
NUP85-202ENST00000449421 GALCP54803 685 aa13.51□□□□□ -0.25
NUP85-202ENST00000449421 YWHAEP62258 255 aaKnown RBP13.51□□□□□ -0.25
NUP85-202ENST00000449421 RBM10P98175 930 aaKnown RBP13.51□□□□□ -0.25
NUP85-202ENST00000449421 MBTD1Q05BQ5 628 aa13.51□□□□□ -0.25
NUP85-202ENST00000449421 TCEAL1Q15170 157 aa13.51□□□□□ -0.25
NUP85-202ENST00000449421 SGSM1Q2NKQ1 1148 aa13.51□□□□□ -0.25
NUP85-202ENST00000449421 ZNF568Q3ZCX4 644 aa13.51□□□□□ -0.25
NUP85-202ENST00000449421 TEX35Q5T0J7 233 aa13.51□□□□□ -0.25
NUP85-202ENST00000449421 CCDC181Q5TID7 509 aa13.51□□□□□ -0.25
NUP85-202ENST00000449421 ZBTB33Q86T24 672 aa13.51□□□□□ -0.25
NUP85-202ENST00000449421 RPUSD2Q8IZ73 545 aaKnown RBP13.51□□□□□ -0.25
NUP85-202ENST00000449421 LNX1Q8TBB1 728 aaPredicted RBP13.51□□□□□ -0.25
NUP85-202ENST00000449421 TRAPPC12Q8WVT3 735 aa13.51□□□□□ -0.25
NUP85-202ENST00000449421 RFFLQ8WZ73 363 aa13.51□□□□□ -0.25
NUP85-202ENST00000449421 ZNF516Q92618 1163 aa13.51□□□□□ -0.25
NUP85-202ENST00000449421 ANKRD36BP1Q96IX9 119 aa13.51□□□□□ -0.25
NUP85-202ENST00000449421 ADPGKQ9BRR6 497 aa13.51□□□□□ -0.25
NUP85-202ENST00000449421 SELENOOQ9BVL4 669 aa13.51□□□□□ -0.25
NUP85-202ENST00000449421 ISCUQ9H1K1 167 aa13.51□□□□□ -0.25
NUP85-202ENST00000449421 RPF1Q9H9Y2 349 aaKnown RBP13.51□□□□□ -0.25
NUP85-202ENST00000449421 PTPRHQ9HD43 1115 aa13.51□□□□□ -0.25
NUP85-202ENST00000449421 PUF60Q9UHX1 559 aaKnown RBP13.51□□□□□ -0.25
NUP85-202ENST00000449421 PCDHB2Q9Y5E7 798 aa13.51□□□□□ -0.25
NUP85-202ENST00000449421 HTTP42858 3142 aa13.5□□□□□ -0.25
NUP85-202ENST00000449421 B4GALT4O60513 344 aa13.5□□□□□ -0.25
NUP85-202ENST00000449421 ADAMTS4O75173 837 aa13.5□□□□□ -0.25
NUP85-202ENST00000449421 CLTAP09496 248 aa13.5□□□□□ -0.25
NUP85-202ENST00000449421 RARBP10826 455 aa13.5□□□□□ -0.25
NUP85-202ENST00000449421 GNAT1P11488 350 aa13.5□□□□□ -0.25
NUP85-202ENST00000449421 HARSP12081 509 aaKnown RBP13.5□□□□□ -0.25
NUP85-202ENST00000449421 HADHBP55084 474 aaKnown RBP13.5□□□□□ -0.25
NUP85-202ENST00000449421 GPC5P78333 572 aa13.5□□□□□ -0.25
NUP85-202ENST00000449421 CDR2Q01850 454 aa13.5□□□□□ -0.25
NUP85-202ENST00000449421 TRPC3Q13507 836 aa13.5□□□□□ -0.25
NUP85-202ENST00000449421 MTFR1Q15390 333 aa13.5□□□□□ -0.25
NUP85-202ENST00000449421 RPS6KA1Q15418 735 aa13.5□□□□□ -0.25
NUP85-202ENST00000449421 CLUL1Q15846 466 aa13.5□□□□□ -0.25
NUP85-202ENST00000449421 CFAP221Q4G0U5 840 aa13.5□□□□□ -0.25
NUP85-202ENST00000449421 GJC2Q5T442 439 aaPredicted RBP13.5□□□□□ -0.25
NUP85-202ENST00000449421 MEI1Q5TIA1 1274 aa13.5□□□□□ -0.25
NUP85-202ENST00000449421 TRIM72Q6ZMU5 477 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms