RNA–Protein interactions for RNA: ENST00000449372.6

SYNGAP1-204, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 3,930 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-204ENST00000449372 TARSP26639 723 aaKnown RBP14.33□□□□□ -0.12
SYNGAP1-204ENST00000449372 OCRLQ01968 901 aa14.33□□□□□ -0.12
SYNGAP1-204ENST00000449372 LMNB2Q03252 620 aa14.33□□□□□ -0.12
SYNGAP1-204ENST00000449372 LIN52Q52LA3 116 aa14.33□□□□□ -0.12
SYNGAP1-204ENST00000449372 NCCRP1Q6ZVX7 275 aaPredicted RBP14.33□□□□□ -0.12
SYNGAP1-204ENST00000449372 UBL4BQ8N7F7 174 aa14.33□□□□□ -0.12
SYNGAP1-204ENST00000449372 FAM133AQ8N9E0 248 aa14.33□□□□□ -0.12
SYNGAP1-204ENST00000449372 SNRNP27Q8WVK2 155 aaKnown RBP14.33□□□□□ -0.12
SYNGAP1-204ENST00000449372 LENG9Q96B70 501 aa14.33□□□□□ -0.12
SYNGAP1-204ENST00000449372 MTUS1Q9ULD2 1270 aa14.33□□□□□ -0.12
SYNGAP1-204ENST00000449372 ITGA2BP08514 1039 aa14.33□□□□□ -0.12
SYNGAP1-204ENST00000449372 SLCO1A2P46721 670 aa14.33□□□□□ -0.12
SYNGAP1-204ENST00000449372 PLOD1Q02809 727 aaPredicted RBP14.33□□□□□ -0.12
SYNGAP1-204ENST00000449372 SPIRE1Q08AE8 756 aa14.33□□□□□ -0.12
SYNGAP1-204ENST00000449372 TRIM59Q8IWR1 403 aa14.33□□□□□ -0.12
SYNGAP1-204ENST00000449372 TBC1D10AQ9BXI6 508 aa14.33□□□□□ -0.12
SYNGAP1-204ENST00000449372 PABPC3Q9H361 631 aaKnown RBP14.33□□□□□ -0.12
SYNGAP1-204ENST00000449372 MROH7Q68CQ1 1323 aa14.33□□□□□ -0.12
SYNGAP1-204ENST00000449372 RAD17O75943 681 aa14.33□□□□□ -0.12
SYNGAP1-204ENST00000449372 ZFXP17010 805 aaPredicted RBP14.33□□□□□ -0.12
SYNGAP1-204ENST00000449372 EPHB2P29323 1055 aa14.33□□□□□ -0.12
SYNGAP1-204ENST00000449372 PMS2P54278 862 aa14.33□□□□□ -0.12
SYNGAP1-204ENST00000449372 MGAT5Q09328 741 aa14.33□□□□□ -0.12
SYNGAP1-204ENST00000449372 DHX34Q14147 1143 aaKnown RBP14.33□□□□□ -0.12
SYNGAP1-204ENST00000449372 BTG3Q14201 252 aaPredicted RBP14.33□□□□□ -0.12
SYNGAP1-204ENST00000449372 CDAN1Q8IWY9 1227 aa14.33□□□□□ -0.12
SYNGAP1-204ENST00000449372 AGBL1Q96MI9 1066 aa14.33□□□□□ -0.12
SYNGAP1-204ENST00000449372 CELF4Q9BZC1 486 aaKnown RBP14.33□□□□□ -0.12
SYNGAP1-204ENST00000449372 SLTMQ9NWH9 1034 aaKnown RBP eCLIP14.33□□□□□ -0.12
SYNGAP1-204ENST00000449372 HSFX1Q9UBD0 423 aa14.33□□□□□ -0.12
SYNGAP1-204ENST00000449372 HDAC9Q9UKV0 1011 aa14.33□□□□□ -0.12
SYNGAP1-204ENST00000449372 USP20Q9Y2K6 914 aa14.33□□□□□ -0.12
SYNGAP1-204ENST00000449372 RBM26Q5T8P6 1007 aaKnown RBP14.32□□□□□ -0.12
SYNGAP1-204ENST00000449372 DAAM2Q86T65 1068 aa14.32□□□□□ -0.12
SYNGAP1-204ENST00000449372 PPFIBP2Q8ND30 876 aa14.32□□□□□ -0.12
SYNGAP1-204ENST00000449372 UHMK1Q8TAS1 419 aaKnown RBP14.32□□□□□ -0.12
SYNGAP1-204ENST00000449372 SH3TC2Q8TF17 1288 aa14.32□□□□□ -0.12
SYNGAP1-204ENST00000449372 DNM3Q9UQ16 869 aa14.32□□□□□ -0.12
SYNGAP1-204ENST00000449372 SLC16A3O15427 465 aaKnown RBP14.32□□□□□ -0.12
SYNGAP1-204ENST00000449372 NR2F2P24468 414 aa14.32□□□□□ -0.12
SYNGAP1-204ENST00000449372 TMED1Q13445 227 aa14.32□□□□□ -0.12
SYNGAP1-204ENST00000449372 RNF43Q68DV7 783 aa14.32□□□□□ -0.12
SYNGAP1-204ENST00000449372 ECHDC2Q86YB7 292 aa14.32□□□□□ -0.12
SYNGAP1-204ENST00000449372 ANKLE1Q8NAG6 615 aa14.32□□□□□ -0.12
SYNGAP1-204ENST00000449372 ETNPPLQ8TBG4 499 aa14.32□□□□□ -0.12
SYNGAP1-204ENST00000449372 GJA10Q969M2 543 aa14.32□□□□□ -0.12
SYNGAP1-204ENST00000449372 BRD8Q9H0E9 1235 aa14.32□□□□□ -0.12
SYNGAP1-204ENST00000449372 TMX2Q9Y320 296 aa14.32□□□□□ -0.12
SYNGAP1-204ENST00000449372 LYNP07948 512 aa14.32□□□□□ -0.12
SYNGAP1-204ENST00000449372 ECE1P42892 770 aa14.32□□□□□ -0.12
SYNGAP1-204ENST00000449372 AP3B2Q13367 1082 aa14.32□□□□□ -0.12
SYNGAP1-204ENST00000449372 SLC29A2Q14542 456 aa14.32□□□□□ -0.12
SYNGAP1-204ENST00000449372 SYDE2Q5VT97 1194 aa14.32□□□□□ -0.12
SYNGAP1-204ENST00000449372 ZNF554Q86TJ5 538 aa14.32□□□□□ -0.12
SYNGAP1-204ENST00000449372 ANO3Q9BYT9 981 aa14.32□□□□□ -0.12
SYNGAP1-204ENST00000449372 METTL5Q9NRN9 209 aaKnown RBP14.32□□□□□ -0.12
SYNGAP1-204ENST00000449372 TMOD4Q9NZQ9 345 aa14.32□□□□□ -0.12
SYNGAP1-204ENST00000449372 ALOX15P16050 662 aaPredicted RBP14.31□□□□□ -0.12
SYNGAP1-204ENST00000449372 GAP43P17677 238 aa14.31□□□□□ -0.12
SYNGAP1-204ENST00000449372 RTP1P59025 263 aa14.31□□□□□ -0.12
SYNGAP1-204ENST00000449372 KCNH2Q12809 1159 aa14.31□□□□□ -0.12
SYNGAP1-204ENST00000449372 KHDC1Q4VXA5 237 aaKnown RBP14.31□□□□□ -0.12
SYNGAP1-204ENST00000449372 AGBL3Q8NEM8 1001 aa14.31□□□□□ -0.12
SYNGAP1-204ENST00000449372 FAM81BQ96LP2 452 aa14.31□□□□□ -0.12
SYNGAP1-204ENST00000449372 TXLNGYQ9BZA5 131 aa14.31□□□□□ -0.12
SYNGAP1-204ENST00000449372 MYLK2Q9H1R3 596 aa14.31□□□□□ -0.12
SYNGAP1-204ENST00000449372 EPB41L4BQ9H329 900 aa14.31□□□□□ -0.12
SYNGAP1-204ENST00000449372 MLXIPLQ9NP71 852 aa14.31□□□□□ -0.12
SYNGAP1-204ENST00000449372 NOC2LQ9Y3T9 749 aaKnown RBP14.31□□□□□ -0.12
SYNGAP1-204ENST00000449372 A0A0J9YVX5 310 aa14.31□□□□□ -0.12
SYNGAP1-204ENST00000449372 MIF4GDA9UHW6 222 aaKnown RBP14.31□□□□□ -0.12
SYNGAP1-204ENST00000449372 TCP10L2B9ZVM9 353 aa14.31□□□□□ -0.12
SYNGAP1-204ENST00000449372 PIK3CDO00329 1044 aa14.31□□□□□ -0.12
SYNGAP1-204ENST00000449372 PODXLO00592 558 aa14.31□□□□□ -0.12
SYNGAP1-204ENST00000449372 PLA2G4BP0C869 781 aa14.31□□□□□ -0.12
SYNGAP1-204ENST00000449372 BMP3P12645 472 aa14.31□□□□□ -0.12
SYNGAP1-204ENST00000449372 HGSNATQ68CP4 663 aa14.31□□□□□ -0.12
SYNGAP1-204ENST00000449372 RNF25Q96BH1 459 aaPredicted RBP14.31□□□□□ -0.12
SYNGAP1-204ENST00000449372 PPP1R14BQ96C90 147 aa14.31□□□□□ -0.12
SYNGAP1-204ENST00000449372 HAUS1Q96CS2 278 aa14.31□□□□□ -0.12
SYNGAP1-204ENST00000449372 ERP27Q96DN0 273 aa14.31□□□□□ -0.12
SYNGAP1-204ENST00000449372 AMNQ9BXJ7 453 aa14.31□□□□□ -0.12
SYNGAP1-204ENST00000449372 DBR1Q9UK59 544 aaKnown RBP14.31□□□□□ -0.12
SYNGAP1-204ENST00000449372 ITGA4P13612 1032 aa14.31□□□□□ -0.12
SYNGAP1-204ENST00000449372 KCNMA1Q12791 1236 aa14.31□□□□□ -0.12
SYNGAP1-204ENST00000449372 PRPF4BQ13523 1007 aaKnown RBP14.31□□□□□ -0.12
SYNGAP1-204ENST00000449372 PTPROQ16827 1216 aa14.31□□□□□ -0.12
SYNGAP1-204ENST00000449372 HS2ST1Q7LGA3 356 aa14.31□□□□□ -0.12
SYNGAP1-204ENST00000449372 NRG4Q8WWG1 115 aa14.31□□□□□ -0.12
SYNGAP1-204ENST00000449372 INPP5DQ92835 1189 aa14.31□□□□□ -0.12
SYNGAP1-204ENST00000449372 DNAJC19Q96DA6 116 aa14.31□□□□□ -0.12
SYNGAP1-204ENST00000449372 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.31□□□□□ -0.12
SYNGAP1-204ENST00000449372 ZNRF3Q9ULT6 936 aa14.31□□□□□ -0.12
SYNGAP1-204ENST00000449372 TMEM98Q9Y2Y6 226 aa14.31□□□□□ -0.12
SYNGAP1-204ENST00000449372 CLRN2A0PK11 232 aa14.3□□□□□ -0.12
SYNGAP1-204ENST00000449372 GGPS1O95749 300 aa14.3□□□□□ -0.12
SYNGAP1-204ENST00000449372 RFX1P22670 979 aa14.3□□□□□ -0.12
SYNGAP1-204ENST00000449372 SNAP25P60880 206 aa14.3□□□□□ -0.12
SYNGAP1-204ENST00000449372 RCN1Q15293 331 aa14.3□□□□□ -0.12
SYNGAP1-204ENST00000449372 FAM83AQ86UY5 434 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms