RNA–Protein interactions for RNA: ENST00000435145.6

HLA-DQB2-231, Transcript of major histocompatibility complex, class II, DQ beta 2, humanhuman

BASIC

Gene HLA-DQB2, Length 2,026 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2-231ENST00000435145 POLR3FQ9H1D9 316 aaPredicted RBP17.2■□□□□ 0.34
HLA-DQB2-231ENST00000435145 ADAM7Q9H2U9 754 aa17.2■□□□□ 0.34
HLA-DQB2-231ENST00000435145 SLC9A2Q9UBY0 812 aa17.2■□□□□ 0.34
HLA-DQB2-231ENST00000435145 DDX20Q9UHI6 824 aaKnown RBP17.2■□□□□ 0.34
HLA-DQB2-231ENST00000435145 PCDHB2Q9Y5E7 798 aa17.2■□□□□ 0.34
HLA-DQB2-231ENST00000435145 MROH7Q68CQ1 1323 aa17.19■□□□□ 0.34
HLA-DQB2-231ENST00000435145 PHIPQ8WWQ0 1821 aa17.19■□□□□ 0.34
HLA-DQB2-231ENST00000435145 CLDN3O15551 220 aa17.19■□□□□ 0.34
HLA-DQB2-231ENST00000435145 RIPK2O43353 540 aa17.19■□□□□ 0.34
HLA-DQB2-231ENST00000435145 ECEL1O95672 775 aa17.19■□□□□ 0.34
HLA-DQB2-231ENST00000435145 PIGRP01833 764 aa17.19■□□□□ 0.34
HLA-DQB2-231ENST00000435145 C4BPAP04003 597 aaKnown RBP17.19■□□□□ 0.34
HLA-DQB2-231ENST00000435145 CYP1A1P04798 512 aaPredicted RBP17.19■□□□□ 0.34
HLA-DQB2-231ENST00000435145 SLC1A1P43005 524 aa17.19■□□□□ 0.34
HLA-DQB2-231ENST00000435145 KCNJ1P48048 391 aa17.19■□□□□ 0.34
HLA-DQB2-231ENST00000435145 PTP4A2Q12974 167 aa17.19■□□□□ 0.34
HLA-DQB2-231ENST00000435145 QPCTQ16769 361 aa17.19■□□□□ 0.34
HLA-DQB2-231ENST00000435145 UBAP2Q5T6F2 1119 aaKnown RBP17.19■□□□□ 0.34
HLA-DQB2-231ENST00000435145 JDP2Q8WYK2 163 aa17.19■□□□□ 0.34
HLA-DQB2-231ENST00000435145 XPO6Q96QU8 1125 aaKnown RBP17.19■□□□□ 0.34
HLA-DQB2-231ENST00000435145 TAOK3Q9H2K8 898 aa17.19■□□□□ 0.34
HLA-DQB2-231ENST00000435145 WHRNQ9P202 907 aa17.19■□□□□ 0.34
HLA-DQB2-231ENST00000435145 SEPT9Q9UHD8 586 aaPredicted RBP17.19■□□□□ 0.34
HLA-DQB2-231ENST00000435145 KCNG1Q9UIX4 513 aa17.19■□□□□ 0.34
HLA-DQB2-231ENST00000435145 ANAPC7Q9UJX3 599 aa17.19■□□□□ 0.34
HLA-DQB2-231ENST00000435145 COL11A1P12107 1806 aaPredicted RBP17.19■□□□□ 0.34
HLA-DQB2-231ENST00000435145 KIAA1217Q5T5P2 1943 aa17.19■□□□□ 0.34
HLA-DQB2-231ENST00000435145 AGTP01019 485 aa17.18■□□□□ 0.34
HLA-DQB2-231ENST00000435145 SCP2P22307 547 aa17.18■□□□□ 0.34
HLA-DQB2-231ENST00000435145 MAPK4P31152 587 aa17.18■□□□□ 0.34
HLA-DQB2-231ENST00000435145 CDR1P51861 262 aa17.18■□□□□ 0.34
HLA-DQB2-231ENST00000435145 BPIFB4P59827 614 aa17.18■□□□□ 0.34
HLA-DQB2-231ENST00000435145 CENPCQ03188 943 aa17.18■□□□□ 0.34
HLA-DQB2-231ENST00000435145 XKR3Q5GH77 459 aa17.18■□□□□ 0.34
HLA-DQB2-231ENST00000435145 C6orf118Q5T5N4 469 aa17.18■□□□□ 0.34
HLA-DQB2-231ENST00000435145 NBPF12Q5TAG4 269 aaPredicted RBP17.18■□□□□ 0.34
HLA-DQB2-231ENST00000435145 RHBDF2Q6PJF5 856 aa17.18■□□□□ 0.34
HLA-DQB2-231ENST00000435145 ZNF280CQ8ND82 737 aa17.18■□□□□ 0.34
HLA-DQB2-231ENST00000435145 EFCC1Q9HA90 598 aa17.18■□□□□ 0.34
HLA-DQB2-231ENST00000435145 CYP39A1Q9NYL5 469 aa17.18■□□□□ 0.34
HLA-DQB2-231ENST00000435145 CALCAP01258 141 aa17.18■□□□□ 0.34
HLA-DQB2-231ENST00000435145 PTPRAP18433 802 aa17.18■□□□□ 0.34
HLA-DQB2-231ENST00000435145 ACO1P21399 889 aaKnown RBP17.18■□□□□ 0.34
HLA-DQB2-231ENST00000435145 DRD4P21917 467 aa17.18■□□□□ 0.34
HLA-DQB2-231ENST00000435145 WNT7BP56706 349 aa17.18■□□□□ 0.34
HLA-DQB2-231ENST00000435145 DRP2Q13474 957 aa17.18■□□□□ 0.34
HLA-DQB2-231ENST00000435145 DCAF15Q66K64 600 aa17.18■□□□□ 0.34
HLA-DQB2-231ENST00000435145 MFSD5Q6N075 450 aa17.18■□□□□ 0.34
HLA-DQB2-231ENST00000435145 SYDE1Q6ZW31 735 aaPredicted RBP17.18■□□□□ 0.34
HLA-DQB2-231ENST00000435145 MON1BQ7L1V2 547 aa17.18■□□□□ 0.34
HLA-DQB2-231ENST00000435145 BICD1Q96G01 975 aa17.18■□□□□ 0.34
HLA-DQB2-231ENST00000435145 DDX27Q96GQ7 796 aaKnown RBP17.18■□□□□ 0.34
HLA-DQB2-231ENST00000435145 FAM84AQ96KN4 292 aa17.18■□□□□ 0.34
HLA-DQB2-231ENST00000435145 TRIM7Q9C029 511 aa17.18■□□□□ 0.34
HLA-DQB2-231ENST00000435145 AS3MTQ9HBK9 375 aa17.18■□□□□ 0.34
HLA-DQB2-231ENST00000435145 HLA-DRAP01903 254 aa17.17■□□□□ 0.34
HLA-DQB2-231ENST00000435145 SUPT20HL2P0C7V6 817 aa17.17■□□□□ 0.34
HLA-DQB2-231ENST00000435145 RRM1P23921 792 aa17.17■□□□□ 0.34
HLA-DQB2-231ENST00000435145 TMEM132BQ14DG7 1078 aa17.17■□□□□ 0.34
HLA-DQB2-231ENST00000435145 SUPT20HL1Q3ZLR7 823 aa17.17■□□□□ 0.34
HLA-DQB2-231ENST00000435145 TDRD10Q5VZ19 366 aaKnown RBP17.17■□□□□ 0.34
HLA-DQB2-231ENST00000435145 TRMT10CQ7L0Y3 403 aaKnown RBP17.17■□□□□ 0.34
HLA-DQB2-231ENST00000435145 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.17■□□□□ 0.34
HLA-DQB2-231ENST00000435145 CNPY4Q8N129 248 aa17.17■□□□□ 0.34
HLA-DQB2-231ENST00000435145 MDM1Q8TC05 714 aa17.17■□□□□ 0.34
HLA-DQB2-231ENST00000435145 MAIP1Q8WWC4 291 aa17.17■□□□□ 0.34
HLA-DQB2-231ENST00000435145 AZI2Q9H6S1 392 aa17.17■□□□□ 0.34
HLA-DQB2-231ENST00000435145 AAASQ9NRG9 546 aa17.17■□□□□ 0.34
HLA-DQB2-231ENST00000435145 PIM2Q9P1W9 311 aa17.17■□□□□ 0.34
HLA-DQB2-231ENST00000435145 HACL1Q9UJ83 578 aa17.17■□□□□ 0.34
HLA-DQB2-231ENST00000435145 CNTN6Q9UQ52 1028 aa17.17■□□□□ 0.34
HLA-DQB2-231ENST00000435145 PTPN22Q9Y2R2 807 aa17.17■□□□□ 0.34
HLA-DQB2-231ENST00000435145 SIP14410 1827 aa17.17■□□□□ 0.34
HLA-DQB2-231ENST00000435145 UMODL1Q5DID0 1318 aa17.16■□□□□ 0.34
HLA-DQB2-231ENST00000435145 RGS16O15492 202 aaPredicted RBP17.16■□□□□ 0.34
HLA-DQB2-231ENST00000435145 VNN1O95497 513 aa17.16■□□□□ 0.34
HLA-DQB2-231ENST00000435145 FGFR4P22455 802 aa17.16■□□□□ 0.34
HLA-DQB2-231ENST00000435145 IVDP26440 423 aa17.16■□□□□ 0.34
HLA-DQB2-231ENST00000435145 MAN1A1P33908 653 aa17.16■□□□□ 0.34
HLA-DQB2-231ENST00000435145 LIG4P49917 911 aa17.16■□□□□ 0.34
HLA-DQB2-231ENST00000435145 IFT88Q13099 833 aa17.16■□□□□ 0.34
HLA-DQB2-231ENST00000435145 EMC2Q15006 297 aa17.16■□□□□ 0.34
HLA-DQB2-231ENST00000435145 SGO2Q562F6 1265 aa17.16■□□□□ 0.34
HLA-DQB2-231ENST00000435145 MIS18BP1Q6P0N0 1132 aa17.16■□□□□ 0.34
HLA-DQB2-231ENST00000435145 POTEAQ6S8J7 498 aa17.16■□□□□ 0.34
HLA-DQB2-231ENST00000435145 CRELD2Q6UXH1 353 aaPredicted RBP17.16■□□□□ 0.34
HLA-DQB2-231ENST00000435145 ATXN2LQ8WWM7 1075 aaKnown RBP17.16■□□□□ 0.34
HLA-DQB2-231ENST00000435145 SEC16BQ96JE7 1060 aa17.16■□□□□ 0.34
HLA-DQB2-231ENST00000435145 ZNF317Q96PQ6 595 aaPredicted RBP17.16■□□□□ 0.34
HLA-DQB2-231ENST00000435145 HERPUD2Q9BSE4 406 aa17.16■□□□□ 0.34
HLA-DQB2-231ENST00000435145 A1CFQ9NQ94 594 aaKnown RBP17.16■□□□□ 0.34
HLA-DQB2-231ENST00000435145 LOC285556D6RIA3 1793 aa17.16■□□□□ 0.34
HLA-DQB2-231ENST00000435145 PTPRJQ12913 1337 aa17.16■□□□□ 0.34
HLA-DQB2-231ENST00000435145 ATG7O95352 703 aa17.16■□□□□ 0.34
HLA-DQB2-231ENST00000435145 ATP4AP20648 1035 aa17.16■□□□□ 0.34
HLA-DQB2-231ENST00000435145 NLRP11P59045 1033 aaKnown RBP17.16■□□□□ 0.34
HLA-DQB2-231ENST00000435145 IFI35P80217 286 aaPredicted RBP17.16■□□□□ 0.34
HLA-DQB2-231ENST00000435145 KRT17Q04695 432 aa17.16■□□□□ 0.34
HLA-DQB2-231ENST00000435145 PTK6Q13882 451 aa17.16■□□□□ 0.34
HLA-DQB2-231ENST00000435145 WDR44Q5JSH3 913 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms