RNA–Protein interactions for RNA: ENST00000429578.5

LINC00887-203, long intergenic non-protein coding RNA 887, humanhuman

TSL 2 BASIC

Gene LINC00887, Length 1,717 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00887-203ENST00000429578 PTPRSQ13332 1948 aa18.47■□□□□ 0.55
LINC00887-203ENST00000429578 IKBKEQ14164 716 aa18.47■□□□□ 0.55
LINC00887-203ENST00000429578 CBWD6Q4V339 395 aa18.47■□□□□ 0.55
LINC00887-203ENST00000429578 XKR4Q5GH76 650 aa18.47■□□□□ 0.55
LINC00887-203ENST00000429578 CBWD3Q5JTY5 395 aa18.47■□□□□ 0.55
LINC00887-203ENST00000429578 CBWD5Q5RIA9 395 aa18.47■□□□□ 0.55
LINC00887-203ENST00000429578 NT5DC4Q86YG4 428 aa18.47■□□□□ 0.55
LINC00887-203ENST00000429578 ZNF516Q92618 1163 aa18.47■□□□□ 0.55
LINC00887-203ENST00000429578 MMRN2Q9H8L6 949 aa18.47■□□□□ 0.55
LINC00887-203ENST00000429578 TMEM8AQ9HCN3 771 aa18.47■□□□□ 0.55
LINC00887-203ENST00000429578 CNTN3Q9P232 1028 aa18.47■□□□□ 0.55
LINC00887-203ENST00000429578 GIT1Q9Y2X7 761 aa18.47■□□□□ 0.55
LINC00887-203ENST00000429578 GTPBP10A4D1E9 387 aaKnown RBP18.46■□□□□ 0.55
LINC00887-203ENST00000429578 MEIS3P2A8K0S8 358 aa18.46■□□□□ 0.55
LINC00887-203ENST00000429578 PMM2O15305 246 aa18.46■□□□□ 0.55
LINC00887-203ENST00000429578 N4BP1O75113 896 aaKnown RBP18.46■□□□□ 0.55
LINC00887-203ENST00000429578 KRT39Q6A163 491 aa18.46■□□□□ 0.55
LINC00887-203ENST00000429578 AGMOQ6ZNB7 445 aa18.46■□□□□ 0.55
LINC00887-203ENST00000429578 EFCAB13Q8IY85 973 aa18.46■□□□□ 0.55
LINC00887-203ENST00000429578 LPPQ93052 612 aa18.46■□□□□ 0.55
LINC00887-203ENST00000429578 TSPAN18Q96SJ8 248 aa18.46■□□□□ 0.55
LINC00887-203ENST00000429578 TMEM117Q9H0C3 514 aa18.46■□□□□ 0.55
LINC00887-203ENST00000429578 IL23AQ9NPF7 189 aa18.46■□□□□ 0.55
LINC00887-203ENST00000429578 UBN1Q9NPG3 1134 aa18.46■□□□□ 0.55
LINC00887-203ENST00000429578 KLK14Q9P0G3 267 aa18.46■□□□□ 0.55
LINC00887-203ENST00000429578 DERAQ9Y315 318 aa18.46■□□□□ 0.55
LINC00887-203ENST00000429578 C2CD2Q9Y426 696 aa18.46■□□□□ 0.55
LINC00887-203ENST00000429578 LOC101059915A0A1B0GWI6 518 aaPredicted RBP18.46■□□□□ 0.55
LINC00887-203ENST00000429578 P4HA2O15460 535 aa18.46■□□□□ 0.55
LINC00887-203ENST00000429578 MXI1P50539 228 aa18.46■□□□□ 0.55
LINC00887-203ENST00000429578 DUOXA2Q1HG44 320 aa18.46■□□□□ 0.55
LINC00887-203ENST00000429578 LMBRD2Q68DH5 695 aaPredicted RBP18.46■□□□□ 0.55
LINC00887-203ENST00000429578 JADE1Q6IE81 842 aa18.46■□□□□ 0.55
LINC00887-203ENST00000429578 GPR153Q6NV75 609 aa18.46■□□□□ 0.55
LINC00887-203ENST00000429578 C15orf39Q6ZRI6 1047 aa18.46■□□□□ 0.55
LINC00887-203ENST00000429578 SV2AQ7L0J3 742 aa18.46■□□□□ 0.55
LINC00887-203ENST00000429578 RNF169Q8NCN4 708 aa18.46■□□□□ 0.55
LINC00887-203ENST00000429578 ANP32BQ92688 251 aaKnown RBP18.46■□□□□ 0.55
LINC00887-203ENST00000429578 ERGIC2Q96RQ1 377 aa18.46■□□□□ 0.55
LINC00887-203ENST00000429578 CXCL16Q9H2A7 254 aa18.46■□□□□ 0.55
LINC00887-203ENST00000429578 ELAC1Q9H777 363 aaKnown RBP18.46■□□□□ 0.55
LINC00887-203ENST00000429578 TMEM161AQ9NX61 479 aa18.46■□□□□ 0.55
LINC00887-203ENST00000429578 ABHD14A-ACY1A0A1B0GW23 586 aa18.45■□□□□ 0.54
LINC00887-203ENST00000429578 A0A1W2PQC6 194 aa18.45■□□□□ 0.54
LINC00887-203ENST00000429578 C4BPAP04003 597 aaKnown RBP18.45■□□□□ 0.54
LINC00887-203ENST00000429578 NFICP08651 508 aa18.45■□□□□ 0.54
LINC00887-203ENST00000429578 KCNE1P15382 129 aa18.45■□□□□ 0.54
LINC00887-203ENST00000429578 PBX1P40424 430 aa18.45■□□□□ 0.54
LINC00887-203ENST00000429578 MYL7Q01449 175 aa18.45■□□□□ 0.54
LINC00887-203ENST00000429578 FPGSQ05932 587 aa18.45■□□□□ 0.54
LINC00887-203ENST00000429578 PPIGQ13427 754 aaKnown RBP eCLIP18.45■□□□□ 0.54
LINC00887-203ENST00000429578 TMEM132DQ14C87 1099 aa18.45■□□□□ 0.54
LINC00887-203ENST00000429578 ZACNQ401N2 412 aa18.45■□□□□ 0.54
LINC00887-203ENST00000429578 OR5B17Q8NGF7 314 aa18.45■□□□□ 0.54
LINC00887-203ENST00000429578 ZMAT2Q96NC0 199 aaKnown RBP18.45■□□□□ 0.54
LINC00887-203ENST00000429578 RSAD1Q9HA92 442 aa18.45■□□□□ 0.54
LINC00887-203ENST00000429578 SCN1AP35498 2009 aa18.45■□□□□ 0.54
LINC00887-203ENST00000429578 TMEM191BP0C7N4 346 aa18.44■□□□□ 0.54
LINC00887-203ENST00000429578 MLH1P40692 756 aa18.44■□□□□ 0.54
LINC00887-203ENST00000429578 TFAMQ00059 246 aaKnown RBP18.44■□□□□ 0.54
LINC00887-203ENST00000429578 CETN1Q12798 172 aa18.44■□□□□ 0.54
LINC00887-203ENST00000429578 ZBTB6Q15916 424 aa18.44■□□□□ 0.54
LINC00887-203ENST00000429578 GSTCDQ8NEC7 633 aa18.44■□□□□ 0.54
LINC00887-203ENST00000429578 CACTINQ8WUQ7 758 aaKnown RBP18.44■□□□□ 0.54
LINC00887-203ENST00000429578 KIF12Q96FN5 646 aa18.44■□□□□ 0.54
LINC00887-203ENST00000429578 ANKRD36BP1Q96IX9 119 aa18.44■□□□□ 0.54
LINC00887-203ENST00000429578 GAD1Q99259 594 aa18.44■□□□□ 0.54
LINC00887-203ENST00000429578 MTMR12Q9C0I1 747 aa18.44■□□□□ 0.54
LINC00887-203ENST00000429578 RNF216Q9NWF9 866 aaPredicted RBP18.44■□□□□ 0.54
LINC00887-203ENST00000429578 COQ4Q9Y3A0 265 aa18.44■□□□□ 0.54
LINC00887-203ENST00000429578 SMIM28A0A1B0GU29 152 aa18.43■□□□□ 0.54
LINC00887-203ENST00000429578 ARL5CA6NH57 179 aa18.43■□□□□ 0.54
LINC00887-203ENST00000429578 EFCAB14O75071 495 aa18.43■□□□□ 0.54
LINC00887-203ENST00000429578 TNNC2P02585 160 aa18.43■□□□□ 0.54
LINC00887-203ENST00000429578 IBSPP21815 317 aaPredicted RBP18.43■□□□□ 0.54
LINC00887-203ENST00000429578 KCNMA1Q12791 1236 aa18.43■□□□□ 0.54
LINC00887-203ENST00000429578 TDRD10Q5VZ19 366 aaKnown RBP18.43■□□□□ 0.54
LINC00887-203ENST00000429578 GBP6Q6ZN66 633 aa18.43■□□□□ 0.54
LINC00887-203ENST00000429578 CRIPAKQ8N1N5 446 aa18.43■□□□□ 0.54
LINC00887-203ENST00000429578 FAM84AQ96KN4 292 aa18.43■□□□□ 0.54
LINC00887-203ENST00000429578 ZFP42Q96MM3 310 aa18.43■□□□□ 0.54
LINC00887-203ENST00000429578 RPS6KC1Q96S38 1066 aa18.43■□□□□ 0.54
LINC00887-203ENST00000429578 PCDHB7Q9Y5E2 793 aa18.43■□□□□ 0.54
LINC00887-203ENST00000429578 PTGESO14684 152 aa18.43■□□□□ 0.54
LINC00887-203ENST00000429578 BAIAP3O94812 1187 aa18.43■□□□□ 0.54
LINC00887-203ENST00000429578 ACRP10323 421 aa18.43■□□□□ 0.54
LINC00887-203ENST00000429578 ACTN1P12814 892 aa18.43■□□□□ 0.54
LINC00887-203ENST00000429578 CDC25BP30305 580 aa18.43■□□□□ 0.54
LINC00887-203ENST00000429578 BIRC3Q13489 604 aa18.43■□□□□ 0.54
LINC00887-203ENST00000429578 SYCP1Q15431 976 aa18.43■□□□□ 0.54
LINC00887-203ENST00000429578 SHHQ15465 462 aa18.43■□□□□ 0.54
LINC00887-203ENST00000429578 PTPN21Q16825 1174 aa18.43■□□□□ 0.54
LINC00887-203ENST00000429578 EXOC3L4Q17RC7 722 aa18.43■□□□□ 0.54
LINC00887-203ENST00000429578 GLRA4Q5JXX5 417 aa18.43■□□□□ 0.54
LINC00887-203ENST00000429578 TRAPPC11Q7Z392 1133 aa18.43■□□□□ 0.54
LINC00887-203ENST00000429578 ARHGAP30Q7Z6I6 1101 aaPredicted RBP18.43■□□□□ 0.54
LINC00887-203ENST00000429578 VSTM4Q8IW00 320 aa18.43■□□□□ 0.54
LINC00887-203ENST00000429578 DEFB123Q8N688 67 aa18.43■□□□□ 0.54
LINC00887-203ENST00000429578 FBXL13Q8NEE6 735 aa18.43■□□□□ 0.54
LINC00887-203ENST00000429578 CRACR2AQ9BSW2 395 aa18.43■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms