RNA–Protein interactions for RNA: ENST00000428101.6

LMO1-202, Transcript of LIM domain only 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LMO1, Length 1,038 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO1-202ENST00000428101 SNX27Q96L92 541 aa29.84■■■□□ 2.37
LMO1-202ENST00000428101 ACAP3Q96P50 834 aa29.84■■■□□ 2.37
LMO1-202ENST00000428101 KCNK12Q9HB15 430 aa29.84■■■□□ 2.37
LMO1-202ENST00000428101 KCNG1Q9UIX4 513 aa29.84■■■□□ 2.37
LMO1-202ENST00000428101 SLC26A4O43511 780 aa29.83■■■□□ 2.37
LMO1-202ENST00000428101 SMTNP53814 917 aa29.83■■■□□ 2.37
LMO1-202ENST00000428101 CACNB1Q02641 598 aaPredicted RBP29.83■■■□□ 2.37
LMO1-202ENST00000428101 STAMQ92783 540 aa29.83■■■□□ 2.37
LMO1-202ENST00000428101 MYADMQ96S97 322 aa29.83■■■□□ 2.37
LMO1-202ENST00000428101 PIDD1Q9HB75 910 aa29.83■■■□□ 2.37
LMO1-202ENST00000428101 KCNE1P15382 129 aa29.82■■■□□ 2.36
LMO1-202ENST00000428101 STRN3Q13033 797 aa29.82■■■□□ 2.36
LMO1-202ENST00000428101 PDXDC1Q6P996 788 aa29.82■■■□□ 2.36
LMO1-202ENST00000428101 PDCD11Q14690 1871 aaKnown RBP29.81■■■□□ 2.36
LMO1-202ENST00000428101 TOM1L1O75674 476 aa29.81■■■□□ 2.36
LMO1-202ENST00000428101 BMP15O95972 392 aa29.81■■■□□ 2.36
LMO1-202ENST00000428101 HARSP12081 509 aaKnown RBP29.81■■■□□ 2.36
LMO1-202ENST00000428101 GBP2P32456 591 aaPredicted RBP29.81■■■□□ 2.36
LMO1-202ENST00000428101 UBA7P41226 1012 aa29.81■■■□□ 2.36
LMO1-202ENST00000428101 TCF15Q12870 199 aa29.81■■■□□ 2.36
LMO1-202ENST00000428101 TDGQ13569 410 aa29.81■■■□□ 2.36
LMO1-202ENST00000428101 PRRX2Q99811 253 aa29.81■■■□□ 2.36
LMO1-202ENST00000428101 BLOC1S4Q9NUP1 217 aa29.81■■■□□ 2.36
LMO1-202ENST00000428101 CNTN3Q9P232 1028 aa29.81■■■□□ 2.36
LMO1-202ENST00000428101 EPS15L1Q9UBC2 864 aa29.81■■■□□ 2.36
LMO1-202ENST00000428101 I3L4J1 428 aa29.8■■■□□ 2.36
LMO1-202ENST00000428101 TKTP29401 623 aaKnown RBP29.8■■■□□ 2.36
LMO1-202ENST00000428101 BRCC3P46736 316 aa29.8■■■□□ 2.36
LMO1-202ENST00000428101 SF3A1Q15459 793 aaKnown RBP29.8■■■□□ 2.36
LMO1-202ENST00000428101 RSPO2Q6UXX9 243 aaPredicted RBP29.8■■■□□ 2.36
LMO1-202ENST00000428101 ZPBP2Q6X784 338 aa29.8■■■□□ 2.36
LMO1-202ENST00000428101 ALYREFQ86V81 257 aaKnown RBP29.8■■■□□ 2.36
LMO1-202ENST00000428101 CALML4Q96GE6 196 aa29.8■■■□□ 2.36
LMO1-202ENST00000428101 DDX27Q96GQ7 796 aaKnown RBP29.8■■■□□ 2.36
LMO1-202ENST00000428101 SLC38A7Q9NVC3 462 aa29.8■■■□□ 2.36
LMO1-202ENST00000428101 IGSF9Q9P2J2 1179 aa29.8■■■□□ 2.36
LMO1-202ENST00000428101 ANKFY1Q9P2R3 1169 aa29.8■■■□□ 2.36
LMO1-202ENST00000428101 MTRRQ9UBK8 725 aa29.8■■■□□ 2.36
LMO1-202ENST00000428101 LONP1P36776 959 aaKnown RBP29.79■■■□□ 2.36
LMO1-202ENST00000428101 NCKAP1LP55160 1127 aa29.79■■■□□ 2.36
LMO1-202ENST00000428101 RAB33AQ14088 237 aa29.79■■■□□ 2.36
LMO1-202ENST00000428101 NOLC1Q14978 699 aaKnown RBP eCLIP29.79■■■□□ 2.36
LMO1-202ENST00000428101 SLC10A6Q3KNW5 377 aa29.79■■■□□ 2.36
LMO1-202ENST00000428101 SEZ6Q53EL9 994 aa29.79■■■□□ 2.36
LMO1-202ENST00000428101 KCNN1Q92952 543 aa29.79■■■□□ 2.36
LMO1-202ENST00000428101 C18orf25Q96B23 403 aaPredicted RBP29.79■■■□□ 2.36
LMO1-202ENST00000428101 REEP2Q9BRK0 252 aa29.79■■■□□ 2.36
LMO1-202ENST00000428101 HAPLN2Q9GZV7 340 aa29.79■■■□□ 2.36
LMO1-202ENST00000428101 LARSQ9P2J5 1176 aaKnown RBP29.79■■■□□ 2.36
LMO1-202ENST00000428101 ODF2LQ9ULJ1 636 aa29.79■■■□□ 2.36
LMO1-202ENST00000428101 DUSP12Q9UNI6 340 aa29.79■■■□□ 2.36
LMO1-202ENST00000428101 PODXLO00592 558 aa29.78■■■□□ 2.36
LMO1-202ENST00000428101 TRAPPC3O43617 180 aa29.78■■■□□ 2.36
LMO1-202ENST00000428101 OR1D2P34982 312 aa29.78■■■□□ 2.36
LMO1-202ENST00000428101 PTPN5P54829 565 aa29.78■■■□□ 2.36
LMO1-202ENST00000428101 MCL1Q07820 350 aa29.78■■■□□ 2.36
LMO1-202ENST00000428101 GPBP1Q86WP2 473 aa29.78■■■□□ 2.36
LMO1-202ENST00000428101 RSAD2Q8WXG1 361 aa29.78■■■□□ 2.36
LMO1-202ENST00000428101 BACE2Q9Y5Z0 518 aa29.78■■■□□ 2.36
LMO1-202ENST00000428101 VPS37CA5D8V6 355 aaPredicted RBP29.77■■■□□ 2.36
LMO1-202ENST00000428101 C8AP07357 584 aa29.77■■■□□ 2.36
LMO1-202ENST00000428101 HNRNPA1P09651 372 aaKnown RBP eCLIP29.77■■■□□ 2.36
LMO1-202ENST00000428101 PLCG1P19174 1290 aa29.77■■■□□ 2.36
LMO1-202ENST00000428101 DHX8Q14562 1220 aaKnown RBP29.77■■■□□ 2.36
LMO1-202ENST00000428101 KARSQ15046 597 aaKnown RBP29.77■■■□□ 2.36
LMO1-202ENST00000428101 LIN9Q5TKA1 542 aa29.77■■■□□ 2.36
LMO1-202ENST00000428101 HAUS6Q7Z4H7 955 aa29.77■■■□□ 2.36
LMO1-202ENST00000428101 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP29.77■■■□□ 2.36
LMO1-202ENST00000428101 CDY1Q9Y6F8 540 aa29.77■■■□□ 2.36
LMO1-202ENST00000428101 CLDN3O15551 220 aa29.76■■■□□ 2.35
LMO1-202ENST00000428101 MCM6Q14566 821 aa29.76■■■□□ 2.35
LMO1-202ENST00000428101 PPM1LQ5SGD2 360 aa29.76■■■□□ 2.35
LMO1-202ENST00000428101 ANKS3Q6ZW76 656 aa29.76■■■□□ 2.35
LMO1-202ENST00000428101 GET4Q7L5D6 327 aaPredicted RBP29.76■■■□□ 2.35
LMO1-202ENST00000428101 GRASPQ7Z6J2 395 aaPredicted RBP29.76■■■□□ 2.35
LMO1-202ENST00000428101 RAD54LQ92698 747 aa29.76■■■□□ 2.35
LMO1-202ENST00000428101 CLIC4Q9Y696 253 aa29.76■■■□□ 2.35
LMO1-202ENST00000428101 CACNA1HO95180 2353 aa29.76■■■□□ 2.35
LMO1-202ENST00000428101 NOTCH4Q99466 2003 aa29.76■■■□□ 2.35
LMO1-202ENST00000428101 H0YCG3 227 aa29.75■■■□□ 2.35
LMO1-202ENST00000428101 NARSO43776 548 aaKnown RBP29.75■■■□□ 2.35
LMO1-202ENST00000428101 LAMP2P13473 410 aa29.75■■■□□ 2.35
LMO1-202ENST00000428101 HOXA9P31269 272 aa29.75■■■□□ 2.35
LMO1-202ENST00000428101 RPL9P32969 192 aaKnown RBP29.75■■■□□ 2.35
LMO1-202ENST00000428101 ZNF131P52739 623 aa29.75■■■□□ 2.35
LMO1-202ENST00000428101 AXDND1Q5T1B0 1012 aaPredicted RBP29.75■■■□□ 2.35
LMO1-202ENST00000428101 TMEM105Q8N8V8 129 aa29.75■■■□□ 2.35
LMO1-202ENST00000428101 SLC7A14Q8TBB6 771 aa29.75■■■□□ 2.35
LMO1-202ENST00000428101 PHOX2BQ99453 314 aa29.75■■■□□ 2.35
LMO1-202ENST00000428101 CCL16O15467 120 aa29.74■■■□□ 2.35
LMO1-202ENST00000428101 PDCP20941 246 aa29.74■■■□□ 2.35
LMO1-202ENST00000428101 MRE11P49959 708 aa29.74■■■□□ 2.35
LMO1-202ENST00000428101 NTHL1P78549 312 aa29.74■■■□□ 2.35
LMO1-202ENST00000428101 PTPAQ15257 358 aa29.74■■■□□ 2.35
LMO1-202ENST00000428101 SLC44A3Q8N4M1 653 aa29.74■■■□□ 2.35
LMO1-202ENST00000428101 CCSER1Q9C0I3 900 aa29.74■■■□□ 2.35
LMO1-202ENST00000428101 CXCL8P10145 99 aa29.73■■■□□ 2.35
LMO1-202ENST00000428101 FSHRP23945 695 aa29.73■■■□□ 2.35
LMO1-202ENST00000428101 UVSSAQ2YD98 709 aa29.73■■■□□ 2.35
LMO1-202ENST00000428101 VARS2Q5ST30 1063 aaKnown RBP29.73■■■□□ 2.35
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms